Protein–RNA interactions for Protein: Q8N7H5

PAF1, RNA polymerase II-associated factor 1 homolog, humanhuman

Predictions only

Length 531 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PAF1Q8N7H5 PRR18-201ENST00000322583 3084 ntAPPRIS P2 BASIC16.59■□□□□ 0.25
PAF1Q8N7H5 KRT18P28-201ENST00000453838 1332 ntBASIC16.59■□□□□ 0.25
PAF1Q8N7H5 MAEA-202ENST00000303400 2222 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
PAF1Q8N7H5 AIFM1-202ENST00000319908 2248 ntAPPRIS ALT2 TSL 1 (best) BASIC16.59■□□□□ 0.25
PAF1Q8N7H5 TBRG4-203ENST00000395655 2225 ntTSL 2 BASIC16.59■□□□□ 0.25
PAF1Q8N7H5 GOLGA6L17P-202ENST00000614358 1398 ntBASIC16.59■□□□□ 0.25
PAF1Q8N7H5 NRSN1-203ENST00000378478 2408 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
PAF1Q8N7H5 EWSR1-222ENST00000629659 2446 ntTSL 5 BASIC16.59■□□□□ 0.25
PAF1Q8N7H5 TSPAN12-202ENST00000415871 1495 ntAPPRIS P1 TSL 5 BASIC16.59■□□□□ 0.25
PAF1Q8N7H5 ATG2A-203ENST00000421419 1481 ntTSL 1 (best) BASIC16.59■□□□□ 0.25
PAF1Q8N7H5 BORCS8-203ENST00000477565 1489 ntAPPRIS ALT1 TSL 1 (best) BASIC16.59■□□□□ 0.25
PAF1Q8N7H5 WT1-203ENST00000379079 2466 ntTSL 1 (best) BASIC16.59■□□□□ 0.25
PAF1Q8N7H5 NFYC-210ENST00000425457 1536 ntTSL 2 BASIC16.59■□□□□ 0.25
PAF1Q8N7H5 SYNPO2L-202ENST00000394810 4921 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
PAF1Q8N7H5 SLC18A2-201ENST00000298472 3852 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
PAF1Q8N7H5 PLEKHA2-208ENST00000616927 1748 ntTSL 5 BASIC16.59■□□□□ 0.25
PAF1Q8N7H5 ZFAND6-201ENST00000261749 1814 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
PAF1Q8N7H5 C1QTNF1-202ENST00000339142 3100 ntAPPRIS P1 TSL 5 BASIC16.59■□□□□ 0.25
PAF1Q8N7H5 WSCD2-206ENST00000547525 4481 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
PAF1Q8N7H5 FAM46C-201ENST00000369448 5751 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.25
PAF1Q8N7H5 SHOX-201ENST00000334060 1951 ntTSL 5 BASIC16.58■□□□□ 0.25
PAF1Q8N7H5 CTCFL-215ENST00000608158 1984 ntTSL 1 (best) BASIC16.58■□□□□ 0.25
PAF1Q8N7H5 FBXL16-202ENST00000397621 3547 ntAPPRIS P1 TSL 5 BASIC16.58■□□□□ 0.25
PAF1Q8N7H5 AUNIP-201ENST00000374298 2116 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.25
PAF1Q8N7H5 NFATC1-207ENST00000545796 3558 ntTSL 2 BASIC16.58■□□□□ 0.25
PAF1Q8N7H5 FAM49B-223ENST00000522746 2196 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.25
PAF1Q8N7H5 ELFN1-202ENST00000561626 3742 ntAPPRIS P1 TSL 2 BASIC16.58■□□□□ 0.25
PAF1Q8N7H5 NCALD-217ENST00000521599 2289 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.25
PAF1Q8N7H5 CLU-215ENST00000523500 2381 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.25
PAF1Q8N7H5 ADAM11-203ENST00000535346 2529 ntTSL 2 BASIC16.58■□□□□ 0.25
PAF1Q8N7H5 DNM3-202ENST00000367731 7613 ntAPPRIS P3 TSL 1 (best) BASIC16.58■□□□□ 0.25
PAF1Q8N7H5 ZNF133-204ENST00000396026 2717 ntAPPRIS P3 TSL 3 BASIC16.58■□□□□ 0.25
PAF1Q8N7H5 RTEL1-201ENST00000318100 4676 ntTSL 2 BASIC16.58■□□□□ 0.25
PAF1Q8N7H5 AFDN-205ENST00000392108 6812 ntTSL 1 (best) BASIC16.58■□□□□ 0.24
PAF1Q8N7H5 PLXNB1-201ENST00000296440 7143 ntAPPRIS P2 TSL 1 (best) BASIC16.58■□□□□ 0.24
PAF1Q8N7H5 UHRF1BP1L-201ENST00000279907 5168 ntAPPRIS P4 TSL 1 (best) BASIC16.58■□□□□ 0.24
PAF1Q8N7H5 SEZ6L-203ENST00000360929 6307 ntTSL 1 (best) BASIC16.58■□□□□ 0.24
PAF1Q8N7H5 CENPM-201ENST00000215980 966 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.24
PAF1Q8N7H5 CCNL1-201ENST00000295925 549 ntTSL 1 (best) BASIC16.58■□□□□ 0.24
PAF1Q8N7H5 CTRB2-201ENST00000303037 901 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.24
PAF1Q8N7H5 HIST1H4J-201ENST00000355057 373 ntAPPRIS P1 BASIC16.58■□□□□ 0.24
PAF1Q8N7H5 PRUNE2-202ENST00000376713 1069 ntTSL 5 BASIC16.58■□□□□ 0.24
PAF1Q8N7H5 LBH-203ENST00000404397 543 ntTSL 4 BASIC16.58■□□□□ 0.24
PAF1Q8N7H5 LINC01264-201ENST00000431395 500 ntTSL 3 BASIC16.58■□□□□ 0.24
PAF1Q8N7H5 MCF2L-AS1-201ENST00000446789 712 ntTSL 3 BASIC16.58■□□□□ 0.24
PAF1Q8N7H5 AC007364.1-201ENST00000449714 1022 ntTSL 2 BASIC16.58■□□□□ 0.24
PAF1Q8N7H5 ITPA-203ENST00000455664 729 ntTSL 1 (best) BASIC16.58■□□□□ 0.24
PAF1Q8N7H5 AC005020.2-201ENST00000455905 830 ntAPPRIS P1 TSL 3 BASIC16.58■□□□□ 0.24
PAF1Q8N7H5 NDUFB2-202ENST00000460088 420 ntTSL 3 BASIC16.58■□□□□ 0.24
PAF1Q8N7H5 RNA5SP410-201ENST00000516285 106 ntBASIC16.58■□□□□ 0.24
PAF1Q8N7H5 AC018558.2-201ENST00000566562 480 ntTSL 3 BASIC16.58■□□□□ 0.24
PAF1Q8N7H5 GNAO1-210ENST00000569295 930 ntTSL 2 BASIC16.58■□□□□ 0.24
PAF1Q8N7H5 PTPRS-204ENST00000587303 6353 ntAPPRIS ALT2 TSL 1 (best) BASIC16.58■□□□□ 0.24
PAF1Q8N7H5 LINC02138-201ENST00000378340 1326 ntTSL 2 BASIC16.58■□□□□ 0.24
PAF1Q8N7H5 CLDN14-201ENST00000342108 1453 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.24
PAF1Q8N7H5 NDUFV1-216ENST00000529927 1503 ntAPPRIS ALT1 TSL 1 (best) BASIC16.58■□□□□ 0.24
PAF1Q8N7H5 PCNX4-203ENST00000406854 4666 ntAPPRIS ALT2 TSL 5 BASIC16.58■□□□□ 0.24
PAF1Q8N7H5 C10orf107-201ENST00000330194 1685 ntAPPRIS P2 TSL 1 (best) BASIC16.58■□□□□ 0.24
PAF1Q8N7H5 GABRD-218ENST00000640949 1684 ntTSL 5 BASIC16.58■□□□□ 0.24
PAF1Q8N7H5 SAMM50-201ENST00000350028 1717 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.24
PAF1Q8N7H5 SRPK3-201ENST00000370100 1717 ntAPPRIS ALT2 TSL 5 BASIC16.58■□□□□ 0.24
PAF1Q8N7H5 OSBPL1A-203ENST00000399441 1887 ntTSL 1 (best) BASIC16.58■□□□□ 0.24
PAF1Q8N7H5 AC009292.1-201ENST00000502156 1986 ntTSL 1 (best) BASIC16.58■□□□□ 0.24
PAF1Q8N7H5 LINC00323-202ENST00000441268 2095 ntTSL 2 BASIC16.58■□□□□ 0.24
PAF1Q8N7H5 ORMDL3-201ENST00000304046 2111 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.24
PAF1Q8N7H5 GABRG3-208ENST00000615808 10768 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.24
PAF1Q8N7H5 SLC43A3-203ENST00000395124 2617 ntAPPRIS P3 TSL 1 (best) BASIC16.58■□□□□ 0.24
PAF1Q8N7H5 MAP4K1-201ENST00000396857 2653 ntAPPRIS P1 TSL 5 BASIC16.58■□□□□ 0.24
PAF1Q8N7H5 PAK6-202ENST00000455577 4215 ntTSL 2 BASIC16.58■□□□□ 0.24
PAF1Q8N7H5 SPIN3-207ENST00000638386 4461 ntAPPRIS P1 TSL 2 BASIC16.58■□□□□ 0.24
PAF1Q8N7H5 GBA2-203ENST00000378103 3611 ntAPPRIS P3 TSL 1 (best) BASIC16.57■□□□□ 0.24
PAF1Q8N7H5 ZNF503-201ENST00000372524 3347 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
PAF1Q8N7H5 AL021453.1-201ENST00000333487 2989 ntTSL 2 BASIC16.57■□□□□ 0.24
PAF1Q8N7H5 SPATA18-202ENST00000419395 2816 ntTSL 2 BASIC16.57■□□□□ 0.24
PAF1Q8N7H5 GCFC2-202ENST00000409857 2516 ntTSL 5 BASIC16.57■□□□□ 0.24
PAF1Q8N7H5 SARDH-205ENST00000422262 2367 ntTSL 5 BASIC16.57■□□□□ 0.24
PAF1Q8N7H5 CEP19-202ENST00000409690 2201 ntAPPRIS P2 TSL 1 (best) BASIC16.57■□□□□ 0.24
PAF1Q8N7H5 ANTXRL-205ENST00000620264 2206 ntAPPRIS P2 TSL 5 BASIC16.57■□□□□ 0.24
PAF1Q8N7H5 U82695.1-201ENST00000635752 1889 ntBASIC16.57■□□□□ 0.24
PAF1Q8N7H5 TACR2-202ENST00000373307 1740 ntTSL 2 BASIC16.57■□□□□ 0.24
PAF1Q8N7H5 FADS1-216ENST00000542506 1725 ntTSL 2 BASIC16.57■□□□□ 0.24
PAF1Q8N7H5 LETM2-201ENST00000297720 1693 ntTSL 2 BASIC16.57■□□□□ 0.24
PAF1Q8N7H5 PDE4DIP-230ENST00000530472 1690 ntTSL 1 (best) BASIC16.57■□□□□ 0.24
PAF1Q8N7H5 NDUFV1-201ENST00000322776 1596 ntAPPRIS P3 TSL 1 (best) BASIC16.57■□□□□ 0.24
PAF1Q8N7H5 ACTR3-208ENST00000535589 1530 ntTSL 2 BASIC16.57■□□□□ 0.24
PAF1Q8N7H5 SIGLEC7-201ENST00000305628 1469 ntTSL 1 (best) BASIC16.57■□□□□ 0.24
PAF1Q8N7H5 AC105339.1-201ENST00000440089 1362 ntTSL 1 (best) BASIC16.57■□□□□ 0.24
PAF1Q8N7H5 WDR74-206ENST00000529106 1366 ntAPPRIS P1 TSL 2 BASIC16.57■□□□□ 0.24
PAF1Q8N7H5 AARSD1-202ENST00000427569 1322 ntAPPRIS P1 TSL 5 BASIC16.57■□□□□ 0.24
PAF1Q8N7H5 ALKBH6-201ENST00000252984 955 ntAPPRIS ALT2 TSL 1 (best) BASIC16.57■□□□□ 0.24
PAF1Q8N7H5 METTL26-202ENST00000338401 544 ntTSL 1 (best) BASIC16.57■□□□□ 0.24
PAF1Q8N7H5 AC002116.1-201ENST00000473572 1130 ntTSL 2 BASIC16.57■□□□□ 0.24
PAF1Q8N7H5 AGGF1-204ENST00000506806 1142 ntTSL 1 (best) BASIC16.57■□□□□ 0.24
PAF1Q8N7H5 AKR1E2-212ENST00000532248 844 ntTSL 1 (best) BASIC16.57■□□□□ 0.24
PAF1Q8N7H5 AP000842.3-202ENST00000569238 1080 ntBASIC16.57■□□□□ 0.24
PAF1Q8N7H5 IL11-202ENST00000585513 1201 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
PAF1Q8N7H5 SEC11C-205ENST00000588875 718 ntTSL 2 BASIC16.57■□□□□ 0.24
PAF1Q8N7H5 PDCD6-214ENST00000628729 1073 ntTSL 5 BASIC16.57■□□□□ 0.24
PAF1Q8N7H5 DIRC2-201ENST00000261038 3596 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
PAF1Q8N7H5 POU4F2-201ENST00000281321 3144 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
Retrieved 100 of 98,524 protein–RNA pairs in 55.1 ms