Protein–RNA interactions for Protein: Q8IVE0

CROCCP3, Putative ciliary rootlet coiled-coil protein-like 2 protein, humanhuman

Predictions only

Length 287 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CROCCP3Q8IVE0 AC013271.1-201ENST00000640669 3202 ntAPPRIS P1 TSL 2 BASIC14.66□□□□□ -0.06
CROCCP3Q8IVE0 SLC29A1-204ENST00000371731 2258 ntAPPRIS P1 TSL 5 BASIC14.66□□□□□ -0.06
CROCCP3Q8IVE0 APLP1-202ENST00000537454 2266 ntTSL 2 BASIC14.66□□□□□ -0.06
CROCCP3Q8IVE0 FRMD3-201ENST00000304195 5297 ntAPPRIS P1 TSL 1 (best) BASIC14.65□□□□□ -0.06
CROCCP3Q8IVE0 IL17RD-201ENST00000296318 8720 ntAPPRIS P1 TSL 1 (best) BASIC14.65□□□□□ -0.06
CROCCP3Q8IVE0 MBD1-201ENST00000269468 3259 ntAPPRIS P3 TSL 5 BASIC14.65□□□□□ -0.06
CROCCP3Q8IVE0 CD6-201ENST00000313421 3252 ntAPPRIS P3 TSL 1 (best) BASIC14.65□□□□□ -0.06
CROCCP3Q8IVE0 ACTR10-201ENST00000254286 2419 ntAPPRIS P1 TSL 1 (best) BASIC14.65□□□□□ -0.06
CROCCP3Q8IVE0 ZBED3-AS1-208ENST00000512001 1668 ntTSL 3 BASIC14.65□□□□□ -0.06
CROCCP3Q8IVE0 GJD2-201ENST00000290374 2889 ntAPPRIS P1 TSL 1 (best) BASIC14.65□□□□□ -0.06
CROCCP3Q8IVE0 CNDP1-201ENST00000358821 2215 ntAPPRIS P2 TSL 1 (best) BASIC14.65□□□□□ -0.06
CROCCP3Q8IVE0 RASD2-201ENST00000216127 3412 ntAPPRIS P1 TSL 1 (best) BASIC14.65□□□□□ -0.06
CROCCP3Q8IVE0 ATCAY-201ENST00000450849 5070 ntAPPRIS P1 TSL 1 (best) BASIC14.65□□□□□ -0.06
CROCCP3Q8IVE0 SLFNL1-204ENST00000372613 2654 ntTSL 2 BASIC14.65□□□□□ -0.06
CROCCP3Q8IVE0 LCA10-201ENST00000618311 1392 ntTSL 2 BASIC14.65□□□□□ -0.06
CROCCP3Q8IVE0 C21orf58-202ENST00000397679 2900 ntAPPRIS ALT2 TSL 2 BASIC14.65□□□□□ -0.06
CROCCP3Q8IVE0 UNC5B-202ENST00000373192 6451 ntTSL 1 (best) BASIC14.65□□□□□ -0.06
CROCCP3Q8IVE0 HOPX-201ENST00000317745 1129 ntAPPRIS P1 TSL 1 (best) BASIC14.65□□□□□ -0.06
CROCCP3Q8IVE0 LMO4-201ENST00000370542 1260 ntAPPRIS P1 TSL 1 (best) BASIC14.65□□□□□ -0.06
CROCCP3Q8IVE0 KLF4P1-201ENST00000412782 1185 ntBASIC14.65□□□□□ -0.06
CROCCP3Q8IVE0 ACTG1P4-201ENST00000425123 1122 ntBASIC14.65□□□□□ -0.06
CROCCP3Q8IVE0 LY6E-202ENST00000429120 1173 ntAPPRIS P2 TSL 1 (best) BASIC14.65□□□□□ -0.06
CROCCP3Q8IVE0 POU5F1P6-201ENST00000466990 990 ntBASIC14.65□□□□□ -0.06
CROCCP3Q8IVE0 FOXP3-205ENST00000518685 1213 ntTSL 1 (best) BASIC14.65□□□□□ -0.06
CROCCP3Q8IVE0 AL356805.1-201ENST00000556383 341 ntTSL 3 BASIC14.65□□□□□ -0.06
CROCCP3Q8IVE0 ZNF772-206ENST00000600175 737 ntTSL 2 BASIC14.65□□□□□ -0.06
CROCCP3Q8IVE0 SPEG-225ENST00000617028 815 ntTSL 5 BASIC14.65□□□□□ -0.06
CROCCP3Q8IVE0 LCE1E-203ENST00000619588 267 ntAPPRIS ALT2 TSL 5 BASIC14.65□□□□□ -0.06
CROCCP3Q8IVE0 SLC16A9-202ENST00000395348 4178 ntAPPRIS P1 TSL 5 BASIC14.65□□□□□ -0.06
CROCCP3Q8IVE0 HLA-F-216ENST00000259951 1635 ntAPPRIS P4 BASIC14.65□□□□□ -0.06
CROCCP3Q8IVE0 GTF2IRD1-201ENST00000265755 3430 ntAPPRIS P3 TSL 1 (best) BASIC14.65□□□□□ -0.06
CROCCP3Q8IVE0 LCAT-201ENST00000264005 1507 ntAPPRIS P1 TSL 1 (best) BASIC14.65□□□□□ -0.06
CROCCP3Q8IVE0 MEAF6-201ENST00000296214 1525 ntAPPRIS ALT1 TSL 1 (best) BASIC14.65□□□□□ -0.06
CROCCP3Q8IVE0 SLC19A2-201ENST00000236137 3671 ntAPPRIS P1 TSL 1 (best) BASIC14.65□□□□□ -0.06
CROCCP3Q8IVE0 TMPRSS3-203ENST00000398405 2754 ntAPPRIS ALT1 TSL 5 BASIC14.65□□□□□ -0.06
CROCCP3Q8IVE0 DBR1-201ENST00000260803 2666 ntAPPRIS P1 TSL 1 (best) BASIC14.65□□□□□ -0.06
CROCCP3Q8IVE0 GRIK5-201ENST00000262895 3493 ntAPPRIS P1 TSL 1 (best) BASIC14.65□□□□□ -0.06
CROCCP3Q8IVE0 CRB3-203ENST00000598494 1443 ntAPPRIS ALT2 TSL 2 BASIC14.65□□□□□ -0.06
CROCCP3Q8IVE0 ZFP36L1-201ENST00000336440 3026 ntAPPRIS P1 TSL 2 BASIC14.65□□□□□ -0.06
CROCCP3Q8IVE0 CTD-3080P12.3-203ENST00000514376 1757 ntTSL 1 (best) BASIC14.65□□□□□ -0.06
CROCCP3Q8IVE0 CGREF1-206ENST00000405600 1346 ntAPPRIS P2 TSL 4 BASIC14.65□□□□□ -0.06
CROCCP3Q8IVE0 AC027031.2-201ENST00000521369 1318 ntTSL 1 (best) BASIC14.65□□□□□ -0.06
CROCCP3Q8IVE0 ZBTB20-215ENST00000481632 2800 ntAPPRIS P1 TSL 1 (best) BASIC14.65□□□□□ -0.06
CROCCP3Q8IVE0 ZNF397-204ENST00000585800 2046 ntTSL 5 BASIC14.65□□□□□ -0.06
CROCCP3Q8IVE0 C3orf62-201ENST00000343010 4235 ntAPPRIS P2 TSL 1 (best) BASIC14.65□□□□□ -0.07
CROCCP3Q8IVE0 NRP2-205ENST00000412873 2730 ntTSL 1 (best) BASIC14.65□□□□□ -0.07
CROCCP3Q8IVE0 USP28-214ENST00000545540 3431 ntTSL 2 BASIC14.64□□□□□ -0.07
CROCCP3Q8IVE0 ITPRIPL1-205ENST00000536814 1947 ntAPPRIS P1 TSL 3 BASIC14.64□□□□□ -0.07
CROCCP3Q8IVE0 IVL-201ENST00000368764 2153 ntAPPRIS P1 TSL 2 BASIC14.64□□□□□ -0.07
CROCCP3Q8IVE0 SEH1L-202ENST00000399892 1846 ntTSL 1 (best) BASIC14.64□□□□□ -0.07
CROCCP3Q8IVE0 AL928921.2-201ENST00000641325 2442 ntBASIC14.64□□□□□ -0.07
CROCCP3Q8IVE0 HYAL2-201ENST00000357750 2055 ntAPPRIS P1 TSL 1 (best) BASIC14.64□□□□□ -0.07
CROCCP3Q8IVE0 THUMPD3-AS1-202ENST00000468186 3253 ntTSL 1 (best) BASIC14.64□□□□□ -0.07
CROCCP3Q8IVE0 PSMD13-212ENST00000532097 1991 ntAPPRIS P1 TSL 1 (best) BASIC14.64□□□□□ -0.07
CROCCP3Q8IVE0 STK3-201ENST00000419617 2826 ntAPPRIS P1 TSL 1 (best) BASIC14.64□□□□□ -0.07
CROCCP3Q8IVE0 MRPL4-203ENST00000393733 1620 ntTSL 5 BASIC14.64□□□□□ -0.07
CROCCP3Q8IVE0 MED25-202ENST00000538643 1623 ntTSL 1 (best) BASIC14.64□□□□□ -0.07
CROCCP3Q8IVE0 AFF3-202ENST00000409236 9849 ntAPPRIS ALT2 TSL 5 BASIC14.64□□□□□ -0.07
CROCCP3Q8IVE0 HSCB-201ENST00000216027 1114 ntAPPRIS P1 TSL 1 (best) BASIC14.64□□□□□ -0.07
CROCCP3Q8IVE0 LRRC23-202ENST00000323702 1208 ntAPPRIS ALT2 TSL 1 (best) BASIC14.64□□□□□ -0.07
CROCCP3Q8IVE0 TMSB4X-201ENST00000380633 495 ntAPPRIS P1 TSL 3 BASIC14.64□□□□□ -0.07
CROCCP3Q8IVE0 CD9-202ENST00000382515 1229 ntTSL 5 BASIC14.64□□□□□ -0.07
CROCCP3Q8IVE0 SLC25A48-204ENST00000433282 1111 ntAPPRIS P1 TSL 5 BASIC14.64□□□□□ -0.07
CROCCP3Q8IVE0 FAM201B-201ENST00000458407 597 ntBASIC14.64□□□□□ -0.07
CROCCP3Q8IVE0 CD99P1-205ENST00000527459 561 ntBASIC14.64□□□□□ -0.07
CROCCP3Q8IVE0 MRPL52-215ENST00000556840 398 ntTSL 2 BASIC14.64□□□□□ -0.07
CROCCP3Q8IVE0 AC140113.3-201ENST00000605663 199 ntBASIC14.64□□□□□ -0.07
CROCCP3Q8IVE0 AC092902.2-222ENST00000626312 568 ntTSL 5 BASIC14.64□□□□□ -0.07
CROCCP3Q8IVE0 LCMT2-202ENST00000567039 1545 ntTSL 2 BASIC14.64□□□□□ -0.07
CROCCP3Q8IVE0 UBC-205ENST00000536769 3745 ntAPPRIS P1 BASIC14.64□□□□□ -0.07
CROCCP3Q8IVE0 C9orf78-201ENST00000372447 1795 ntAPPRIS P1 TSL 1 (best) BASIC14.64□□□□□ -0.07
CROCCP3Q8IVE0 AC093525.2-201ENST00000564543 1944 ntAPPRIS P1 TSL 2 BASIC14.64□□□□□ -0.07
CROCCP3Q8IVE0 TRIP10-201ENST00000313244 2153 ntTSL 1 (best) BASIC14.64□□□□□ -0.07
CROCCP3Q8IVE0 MYADM-203ENST00000391769 3186 ntAPPRIS P1 TSL 1 (best) BASIC14.64□□□□□ -0.07
CROCCP3Q8IVE0 PITRM1-206ENST00000451104 3183 ntTSL 2 BASIC14.64□□□□□ -0.07
CROCCP3Q8IVE0 AMT-202ENST00000395338 1831 ntAPPRIS ALT1 TSL 1 (best) BASIC14.64□□□□□ -0.07
CROCCP3Q8IVE0 LINC00271-201ENST00000421378 1580 ntTSL 1 (best) BASIC14.64□□□□□ -0.07
CROCCP3Q8IVE0 LINC01184-204ENST00000501702 2977 ntTSL 1 (best) BASIC14.64□□□□□ -0.07
CROCCP3Q8IVE0 RGS3-208ENST00000394646 2716 ntTSL 2 BASIC14.64□□□□□ -0.07
CROCCP3Q8IVE0 UBTF-205ENST00000526094 2459 ntTSL 5 BASIC14.64□□□□□ -0.07
CROCCP3Q8IVE0 MTF2-202ENST00000370303 1951 ntTSL 1 (best) BASIC14.64□□□□□ -0.07
CROCCP3Q8IVE0 RSRP1-202ENST00000431849 1954 ntAPPRIS ALT2 TSL 1 (best) BASIC14.64□□□□□ -0.07
CROCCP3Q8IVE0 IL3RA-201ENST00000331035 1706 ntAPPRIS P1 TSL 1 (best) BASIC14.63□□□□□ -0.07
CROCCP3Q8IVE0 FUNDC2-201ENST00000369498 6455 ntAPPRIS P1 TSL 1 (best) BASIC14.63□□□□□ -0.07
CROCCP3Q8IVE0 CCDC188-201ENST00000439765 1475 ntAPPRIS P1 TSL 5 BASIC14.63□□□□□ -0.07
CROCCP3Q8IVE0 CIC-207ENST00000575354 5473 ntAPPRIS P2 TSL 1 (best) BASIC14.63□□□□□ -0.07
CROCCP3Q8IVE0 ZMYM3-206ENST00000373988 6021 ntAPPRIS ALT1 TSL 5 BASIC14.63□□□□□ -0.07
CROCCP3Q8IVE0 C1QTNF1-209ENST00000581774 1368 ntAPPRIS P1 TSL 1 (best) BASIC14.63□□□□□ -0.07
CROCCP3Q8IVE0 KCNH1-214ENST00000640566 1365 ntTSL 1 (best) BASIC14.63□□□□□ -0.07
CROCCP3Q8IVE0 IMPDH1-204ENST00000419067 2431 ntTSL 3 BASIC14.63□□□□□ -0.07
CROCCP3Q8IVE0 TIE1-201ENST00000372476 3882 ntAPPRIS P1 TSL 1 (best) BASIC14.63□□□□□ -0.07
CROCCP3Q8IVE0 SMTN-223ENST00000619644 3227 ntTSL 2 BASIC14.63□□□□□ -0.07
CROCCP3Q8IVE0 PPIL2-202ENST00000398831 2574 ntAPPRIS P1 TSL 1 (best) BASIC14.63□□□□□ -0.07
CROCCP3Q8IVE0 MUTYH-210ENST00000450313 1929 ntTSL 5 BASIC14.63□□□□□ -0.07
CROCCP3Q8IVE0 MLX-202ENST00000346833 2334 ntAPPRIS ALT1 TSL 1 (best) BASIC14.63□□□□□ -0.07
CROCCP3Q8IVE0 GLUL-203ENST00000339526 3942 ntAPPRIS P1 TSL 1 (best) BASIC14.63□□□□□ -0.07
CROCCP3Q8IVE0 KCNMA1-202ENST00000286628 6233 ntAPPRIS ALT2 TSL 1 (best) BASIC14.63□□□□□ -0.07
CROCCP3Q8IVE0 CCDC183-201ENST00000338005 1671 ntAPPRIS P1 TSL 1 (best) BASIC14.63□□□□□ -0.07
CROCCP3Q8IVE0 TBPL1-203ENST00000367871 808 ntTSL 2 BASIC14.63□□□□□ -0.07
CROCCP3Q8IVE0 CACYBP-202ENST00000405362 1059 ntTSL 5 BASIC14.63□□□□□ -0.07
Retrieved 100 of 98,524 protein–RNA pairs in 29.4 ms