Protein–RNA interactions for Protein: Q12829

RAB40B, Ras-related protein Rab-40B, humanhuman

Predictions only

Length 278 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RAB40BQ12829 AC092127.1-201ENST00000567093 3455 ntBASIC14.45□□□□□ -0.1
RAB40BQ12829 ASIC4-202ENST00000358078 2741 ntAPPRIS ALT2 TSL 5 BASIC14.45□□□□□ -0.1
RAB40BQ12829 NDRG2-202ENST00000298687 2122 ntAPPRIS P4 TSL 1 (best) BASIC14.45□□□□□ -0.1
RAB40BQ12829 NR2E3-202ENST00000617575 1998 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
RAB40BQ12829 C18orf25-203ENST00000615052 5462 ntAPPRIS P1 TSL 5 BASIC14.45□□□□□ -0.1
RAB40BQ12829 CAPN2-201ENST00000295006 3573 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
RAB40BQ12829 HIST1H2AC-202ENST00000377791 1654 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
RAB40BQ12829 PALLD-215ENST00000512127 2958 ntTSL 2 BASIC14.45□□□□□ -0.1
RAB40BQ12829 PIK3CD-206ENST00000536656 5483 ntTSL 5 BASIC14.45□□□□□ -0.1
RAB40BQ12829 PIK3CD-208ENST00000628140 5483 ntTSL 5 BASIC14.45□□□□□ -0.1
RAB40BQ12829 FAM160A2-203ENST00000524416 3327 ntTSL 2 BASIC14.44□□□□□ -0.1
RAB40BQ12829 PRR19-204ENST00000598490 1641 ntAPPRIS ALT2 TSL 1 (best) BASIC14.44□□□□□ -0.1
RAB40BQ12829 VIPR2-202ENST00000377633 1491 ntTSL 2 BASIC14.44□□□□□ -0.1
RAB40BQ12829 CICP23-201ENST00000605013 2741 ntBASIC14.44□□□□□ -0.1
RAB40BQ12829 AL035460.1-201ENST00000380593 1866 ntAPPRIS P1 TSL 2 BASIC14.44□□□□□ -0.1
RAB40BQ12829 TACR2-203ENST00000619173 1713 ntTSL 5 BASIC14.44□□□□□ -0.1
RAB40BQ12829 DLGAP2-215ENST00000637795 3380 ntTSL 5 BASIC14.44□□□□□ -0.1
RAB40BQ12829 CNTNAP3-202ENST00000358144 4885 ntTSL 5 BASIC14.44□□□□□ -0.1
RAB40BQ12829 ZNF713-202ENST00000429591 4339 ntAPPRIS P2 TSL 5 BASIC14.44□□□□□ -0.1
RAB40BQ12829 PACSIN2-201ENST00000263246 3249 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
RAB40BQ12829 GSN-203ENST00000373808 2664 ntTSL 2 BASIC14.44□□□□□ -0.1
RAB40BQ12829 RNF11-201ENST00000242719 3084 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
RAB40BQ12829 DUSP22-202ENST00000419235 3098 ntAPPRIS P1 TSL 2 BASIC14.44□□□□□ -0.1
RAB40BQ12829 CACNA1A-202ENST00000573710 7569 ntAPPRIS ALT2 TSL 5 BASIC14.44□□□□□ -0.1
RAB40BQ12829 TMEM189-203ENST00000371656 1973 ntTSL 2 BASIC14.44□□□□□ -0.1
RAB40BQ12829 TBRG4-201ENST00000258770 2243 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
RAB40BQ12829 RCSD1-206ENST00000537350 3044 ntAPPRIS ALT2 TSL 1 (best) BASIC14.44□□□□□ -0.1
RAB40BQ12829 CKLF-202ENST00000345436 571 ntAPPRIS ALT2 TSL 1 (best) BASIC14.44□□□□□ -0.1
RAB40BQ12829 CD99-205ENST00000381192 1245 ntAPPRIS P3 TSL 1 (best) BASIC14.44□□□□□ -0.1
RAB40BQ12829 ISOC2-202ENST00000425675 998 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
RAB40BQ12829 AC136632.2-201ENST00000512891 861 ntBASIC14.44□□□□□ -0.1
RAB40BQ12829 SMAP1-202ENST00000370452 2491 ntTSL 2 BASIC14.44□□□□□ -0.1
RAB40BQ12829 AC005885.1-204ENST00000637885 2885 ntAPPRIS P1 TSL 5 BASIC14.44□□□□□ -0.1
RAB40BQ12829 CCAR2-201ENST00000308511 4853 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
RAB40BQ12829 DYNC1LI2-203ENST00000443351 1502 ntTSL 2 BASIC14.44□□□□□ -0.1
RAB40BQ12829 TRIML1-201ENST00000332517 1797 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
RAB40BQ12829 RNF167-211ENST00000575111 1757 ntAPPRIS P3 TSL 1 (best) BASIC14.44□□□□□ -0.1
RAB40BQ12829 CHTF18-205ENST00000455171 3172 ntAPPRIS ALT2 TSL 2 BASIC14.44□□□□□ -0.1
RAB40BQ12829 ELMO3-202ENST00000393997 2531 ntAPPRIS P2 TSL 2 BASIC14.44□□□□□ -0.1
RAB40BQ12829 CFAP53-201ENST00000398545 1851 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
RAB40BQ12829 ZCCHC4-201ENST00000302874 2785 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
RAB40BQ12829 TTC28-AS1-219ENST00000454741 5064 ntTSL 1 (best) BASIC14.44□□□□□ -0.1
RAB40BQ12829 SYN1-201ENST00000295987 3299 ntAPPRIS P3 TSL 2 BASIC14.44□□□□□ -0.1
RAB40BQ12829 MAD1L1-203ENST00000402746 2355 ntTSL 2 BASIC14.44□□□□□ -0.1
RAB40BQ12829 SLC25A4-201ENST00000281456 4440 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
RAB40BQ12829 PKD1L2-209ENST00000531391 1488 ntTSL 1 (best) BASIC14.44□□□□□ -0.1
RAB40BQ12829 ELMOD1-201ENST00000265840 2852 ntTSL 1 (best) BASIC14.44□□□□□ -0.1
RAB40BQ12829 SHROOM4-201ENST00000289292 6261 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
RAB40BQ12829 TSPAN4-208ENST00000409531 1339 ntTSL 5 BASIC14.43□□□□□ -0.1
RAB40BQ12829 PPHLN1-201ENST00000256678 1820 ntTSL 2 BASIC14.43□□□□□ -0.1
RAB40BQ12829 AC138517.2-201ENST00000637503 2594 ntAPPRIS P1 TSL 5 BASIC14.43□□□□□ -0.1
RAB40BQ12829 TCP11L1-201ENST00000334274 2817 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
RAB40BQ12829 VPS26A-201ENST00000263559 2697 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
RAB40BQ12829 ZNF84-202ENST00000392319 7020 ntAPPRIS P2 TSL 1 (best) BASIC14.43□□□□□ -0.1
RAB40BQ12829 BUD13-201ENST00000260210 2196 ntAPPRIS P3 TSL 1 (best) BASIC14.43□□□□□ -0.1
RAB40BQ12829 SYT12-203ENST00000525457 1678 ntAPPRIS P1 TSL 2 BASIC14.43□□□□□ -0.1
RAB40BQ12829 PLEKHG3-202ENST00000394691 4397 ntTSL 5 BASIC14.43□□□□□ -0.1
RAB40BQ12829 ARF6-201ENST00000298316 3865 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
RAB40BQ12829 CDC42EP4-202ENST00000439510 2879 ntTSL 2 BASIC14.43□□□□□ -0.1
RAB40BQ12829 TRPC6-203ENST00000360497 2631 ntTSL 1 (best) BASIC14.43□□□□□ -0.1
RAB40BQ12829 PXMP4-201ENST00000217398 979 ntTSL 2 BASIC14.43□□□□□ -0.1
RAB40BQ12829 STK40-202ENST00000373129 3846 ntAPPRIS P3 TSL 1 (best) BASIC14.43□□□□□ -0.1
RAB40BQ12829 AC073621.1-201ENST00000392730 636 ntBASIC14.43□□□□□ -0.1
RAB40BQ12829 SMAGP-202ENST00000398453 1062 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
RAB40BQ12829 LHFPL2-207ENST00000515007 4680 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
RAB40BQ12829 IGHV3-65-201ENST00000523210 341 ntBASIC14.43□□□□□ -0.1
RAB40BQ12829 CIPC-205ENST00000555437 566 ntTSL 3 BASIC14.43□□□□□ -0.1
RAB40BQ12829 AC087388.1-201ENST00000571370 1112 ntBASIC14.43□□□□□ -0.1
RAB40BQ12829 AC018529.2-201ENST00000612024 828 ntTSL 4 BASIC14.43□□□□□ -0.1
RAB40BQ12829 RPS9-207ENST00000441429 1600 ntTSL 1 (best) BASIC14.43□□□□□ -0.1
RAB40BQ12829 UBE3A-227ENST00000638011 8742 ntAPPRIS ALT1 TSL 5 BASIC14.43□□□□□ -0.1
RAB40BQ12829 ILDR1-202ENST00000344209 2226 ntAPPRIS ALT2 TSL 1 (best) BASIC14.43□□□□□ -0.1
RAB40BQ12829 HTR3A-203ENST00000375498 2235 ntTSL 1 (best) BASIC14.43□□□□□ -0.1
RAB40BQ12829 PNPLA3-203ENST00000423180 2222 ntTSL 2 BASIC14.43□□□□□ -0.1
RAB40BQ12829 HCK-209ENST00000538448 2215 ntAPPRIS ALT2 TSL 2 BASIC14.43□□□□□ -0.1
RAB40BQ12829 SYT15-201ENST00000374321 1369 ntAPPRIS P4 TSL 2 BASIC14.43□□□□□ -0.1
RAB40BQ12829 UBAC2-203ENST00000403766 1375 ntAPPRIS P1 TSL 2 BASIC14.43□□□□□ -0.1
RAB40BQ12829 C5orf30-202ENST00000510890 2933 ntAPPRIS P1 TSL 2 BASIC14.43□□□□□ -0.1
RAB40BQ12829 C1R-202ENST00000536053 2347 ntTSL 2 BASIC14.43□□□□□ -0.1
RAB40BQ12829 PDE4A-203ENST00000380702 4781 ntAPPRIS P4 TSL 1 (best) BASIC14.43□□□□□ -0.1
RAB40BQ12829 CLEC18A-201ENST00000288040 2155 ntAPPRIS P2 TSL 1 (best) BASIC14.43□□□□□ -0.1
RAB40BQ12829 SLC35C2-202ENST00000317734 2175 ntTSL 2 BASIC14.43□□□□□ -0.1
RAB40BQ12829 CTBP1-209ENST00000510568 4250 ntTSL 1 (best) BASIC14.43□□□□□ -0.1
RAB40BQ12829 AC013726.1-201ENST00000563747 2285 ntBASIC14.43□□□□□ -0.1
RAB40BQ12829 PGBD5-201ENST00000391860 10961 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
RAB40BQ12829 ACSS2-202ENST00000360596 3065 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
RAB40BQ12829 MTFMT-201ENST00000220058 2734 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
RAB40BQ12829 PCDHB8-201ENST00000239444 2740 ntAPPRIS P1 BASIC14.43□□□□□ -0.1
RAB40BQ12829 AL669918.1-201ENST00000452392 2705 ntAPPRIS P1 TSL 2 BASIC14.43□□□□□ -0.1
RAB40BQ12829 FAM227B-201ENST00000299338 2008 ntAPPRIS P3 TSL 2 BASIC14.42□□□□□ -0.1
RAB40BQ12829 CASR-202ENST00000498619 5009 ntTSL 1 (best) BASIC14.42□□□□□ -0.1
RAB40BQ12829 NDUFB9-206ENST00000522532 1319 ntTSL 2 BASIC14.42□□□□□ -0.1
RAB40BQ12829 C2orf27A-205ENST00000624391 1335 ntTSL 1 (best) BASIC14.42□□□□□ -0.1
RAB40BQ12829 GPI-205ENST00000586425 1799 ntTSL 5 BASIC14.42□□□□□ -0.1
RAB40BQ12829 MARS-233ENST00000628866 2583 ntTSL 5 BASIC14.42□□□□□ -0.1
RAB40BQ12829 WASH6P-202ENST00000359512 1437 ntBASIC14.42□□□□□ -0.1
RAB40BQ12829 TMEM120A-201ENST00000417509 1444 ntTSL 2 BASIC14.42□□□□□ -0.1
RAB40BQ12829 TEX264-209ENST00000457573 1448 ntAPPRIS P3 TSL 5 BASIC14.42□□□□□ -0.1
RAB40BQ12829 PRDM6-201ENST00000407847 9267 ntAPPRIS P1 TSL 5 BASIC14.42□□□□□ -0.1
RAB40BQ12829 PCDHA3-202ENST00000532566 4594 ntBASIC14.42□□□□□ -0.1
Retrieved 100 of 98,524 protein–RNA pairs in 44.9 ms