Protein–RNA interactions for Protein: P22223

CDH3, Cadherin-3, humanhuman

Predictions only

Length 829 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDH3P22223 STKLD1-201ENST00000371957 2825 ntAPPRIS P1 TSL 1 (best) BASIC15.85■□□□□ 0.13
CDH3P22223 TEKT4P2-201ENST00000416067 1599 ntTSL 1 (best) BASIC15.85■□□□□ 0.13
CDH3P22223 SNHG11-201ENST00000359074 1031 ntTSL 1 (best) BASIC15.85■□□□□ 0.13
CDH3P22223 UGGT2-202ENST00000376714 1233 ntTSL 1 (best) BASIC15.85■□□□□ 0.13
CDH3P22223 AP1S3-202ENST00000396653 589 ntTSL 4 BASIC15.85■□□□□ 0.13
CDH3P22223 CYTH4-203ENST00000405206 636 ntTSL 4 BASIC15.85■□□□□ 0.13
CDH3P22223 HLA-DRB6-201ENST00000411500 1235 ntBASIC15.85■□□□□ 0.13
CDH3P22223 XXYLT1-204ENST00000429994 865 ntTSL 3 BASIC15.85■□□□□ 0.13
CDH3P22223 SPDYE14P-201ENST00000442619 822 ntBASIC15.85■□□□□ 0.13
CDH3P22223 AC004865.2-202ENST00000444348 852 ntTSL 3 BASIC15.85■□□□□ 0.13
CDH3P22223 APBB2-208ENST00000504305 1274 ntTSL 5 BASIC15.85■□□□□ 0.13
CDH3P22223 AC069262.1-201ENST00000539058 672 ntBASIC15.85■□□□□ 0.13
CDH3P22223 AL512356.2-201ENST00000546955 174 ntBASIC15.85■□□□□ 0.13
CDH3P22223 RPL28-205ENST00000558131 444 ntTSL 5 BASIC15.85■□□□□ 0.13
CDH3P22223 UGGT2-212ENST00000621375 1004 ntTSL 5 BASIC15.85■□□□□ 0.13
CDH3P22223 SELENOH-206ENST00000622257 1291 ntAPPRIS ALT1 TSL 5 BASIC15.85■□□□□ 0.13
CDH3P22223 TMEM114-205ENST00000624696 560 ntTSL 2 BASIC15.85■□□□□ 0.13
CDH3P22223 RAB34-224ENST00000636513 888 ntTSL 5 BASIC15.85■□□□□ 0.13
CDH3P22223 UGGT2-213ENST00000638479 1010 ntTSL 5 BASIC15.85■□□□□ 0.13
CDH3P22223 TPCN1-201ENST00000335509 5274 ntAPPRIS P1 TSL 1 (best) BASIC15.85■□□□□ 0.13
CDH3P22223 ARHGEF1-204ENST00000378152 2986 ntTSL 1 (best) BASIC15.85■□□□□ 0.13
CDH3P22223 CGREF1-206ENST00000405600 1346 ntAPPRIS P2 TSL 4 BASIC15.85■□□□□ 0.13
CDH3P22223 DNMT3A-205ENST00000402667 2300 ntAPPRIS ALT1 TSL 5 BASIC15.85■□□□□ 0.13
CDH3P22223 AC144831.1-201ENST00000573312 2656 ntBASIC15.85■□□□□ 0.13
CDH3P22223 BCAT2-202ENST00000402551 2041 ntTSL 2 BASIC15.85■□□□□ 0.13
CDH3P22223 FAHD2B-202ENST00000414820 1388 ntAPPRIS P1 TSL 5 BASIC15.85■□□□□ 0.13
CDH3P22223 CACNA1A-202ENST00000573710 7569 ntAPPRIS ALT2 TSL 5 BASIC15.85■□□□□ 0.13
CDH3P22223 PLEKHA2-208ENST00000616927 1748 ntTSL 5 BASIC15.85■□□□□ 0.13
CDH3P22223 LINC00942-201ENST00000515614 2417 ntTSL 5 BASIC15.85■□□□□ 0.13
CDH3P22223 VPS54-201ENST00000272322 3463 ntAPPRIS P3 TSL 5 BASIC15.85■□□□□ 0.13
CDH3P22223 SPAG1-202ENST00000388798 3852 ntAPPRIS P1 TSL 1 (best) BASIC15.85■□□□□ 0.13
CDH3P22223 AC020659.1-201ENST00000309874 2900 ntTSL 2 BASIC15.84■□□□□ 0.13
CDH3P22223 PA2G4-201ENST00000303305 2577 ntAPPRIS P1 TSL 1 (best) BASIC15.84■□□□□ 0.13
CDH3P22223 BCS1L-212ENST00000439945 1483 ntAPPRIS P1 TSL 5 BASIC15.84■□□□□ 0.13
CDH3P22223 TEAD3-201ENST00000338863 2983 ntAPPRIS ALT2 TSL 1 (best) BASIC15.84■□□□□ 0.13
CDH3P22223 PKN3-201ENST00000291906 3375 ntAPPRIS P1 TSL 1 (best) BASIC15.84■□□□□ 0.13
CDH3P22223 ANXA8-203ENST00000583874 1860 ntTSL 1 (best) BASIC15.84■□□□□ 0.13
CDH3P22223 TMEM19-201ENST00000266673 5656 ntAPPRIS P1 TSL 1 (best) BASIC15.84■□□□□ 0.13
CDH3P22223 AC021148.1-201ENST00000513652 1532 ntTSL 1 (best) BASIC15.84■□□□□ 0.13
CDH3P22223 ZNRF3-201ENST00000402174 2667 ntAPPRIS P3 TSL 2 BASIC15.84■□□□□ 0.13
CDH3P22223 AC092143.3-201ENST00000565150 1900 ntTSL 5 BASIC15.84■□□□□ 0.13
CDH3P22223 SLC6A11-201ENST00000254488 4296 ntAPPRIS P1 TSL 1 (best) BASIC15.84■□□□□ 0.13
CDH3P22223 TNFRSF13C-201ENST00000291232 3944 ntAPPRIS P1 TSL 1 (best) BASIC15.84■□□□□ 0.13
CDH3P22223 FUT2-201ENST00000391876 1593 ntAPPRIS P1 TSL 2 BASIC15.84■□□□□ 0.13
CDH3P22223 HOXA10-202ENST00000396344 1570 ntAPPRIS ALT1 TSL 1 (best) BASIC15.84■□□□□ 0.13
CDH3P22223 SHOX-201ENST00000334060 1951 ntTSL 5 BASIC15.84■□□□□ 0.13
CDH3P22223 TRPV4-205ENST00000537083 2436 ntTSL 1 (best) BASIC15.84■□□□□ 0.13
CDH3P22223 GLMP-201ENST00000362007 1604 ntAPPRIS P3 TSL 1 (best) BASIC15.84■□□□□ 0.13
CDH3P22223 SHTN1-201ENST00000260777 5308 ntAPPRIS ALT2 TSL 2 BASIC15.84■□□□□ 0.13
CDH3P22223 AC092384.3-202ENST00000564646 2873 ntBASIC15.84■□□□□ 0.13
CDH3P22223 KLHDC8A-201ENST00000367155 2928 ntAPPRIS P1 TSL 2 BASIC15.84■□□□□ 0.13
CDH3P22223 C10orf107-201ENST00000330194 1685 ntAPPRIS P2 TSL 1 (best) BASIC15.84■□□□□ 0.13
CDH3P22223 WLS-203ENST00000370971 700 ntTSL 1 (best) BASIC15.84■□□□□ 0.13
CDH3P22223 LY6G6C-201ENST00000375819 992 ntAPPRIS P1 TSL 1 (best) BASIC15.84■□□□□ 0.13
CDH3P22223 CAMKMT-204ENST00000407131 652 ntTSL 3 BASIC15.84■□□□□ 0.13
CDH3P22223 TMEM191A-202ENST00000419950 663 ntTSL 3 BASIC15.84■□□□□ 0.13
CDH3P22223 SAPCD1-209ENST00000425424 820 ntAPPRIS ALT2 TSL 5 BASIC15.84■□□□□ 0.13
CDH3P22223 AC142381.1-201ENST00000426099 345 ntBASIC15.84■□□□□ 0.13
CDH3P22223 GATD1-206ENST00000526325 756 ntTSL 5 BASIC15.84■□□□□ 0.13
CDH3P22223 AC091053.1-201ENST00000529883 744 ntTSL 3 BASIC15.84■□□□□ 0.13
CDH3P22223 KF456478.1-201ENST00000585980 472 ntTSL 3 BASIC15.84■□□□□ 0.13
CDH3P22223 MOB3A-209ENST00000592280 1071 ntAPPRIS P1 TSL 1 (best) BASIC15.84■□□□□ 0.13
CDH3P22223 AC244153.1-203ENST00000622796 419 ntTSL 2 BASIC15.84■□□□□ 0.13
CDH3P22223 PRDM1-203ENST00000369096 5164 ntAPPRIS P1 TSL 1 (best) BASIC15.84■□□□□ 0.13
CDH3P22223 HELZ2-202ENST00000427522 7827 ntTSL 1 (best) BASIC15.84■□□□□ 0.13
CDH3P22223 SLC3A2-203ENST00000377890 2161 ntTSL 1 (best) BASIC15.84■□□□□ 0.13
CDH3P22223 DUOXA2-201ENST00000323030 1760 ntAPPRIS P1 TSL 1 (best) BASIC15.84■□□□□ 0.13
CDH3P22223 RAB31-207ENST00000578921 4055 ntAPPRIS P1 TSL 1 (best) BASIC15.84■□□□□ 0.13
CDH3P22223 COMP-203ENST00000542601 2707 ntTSL 1 (best) BASIC15.84■□□□□ 0.13
CDH3P22223 CLCF1-201ENST00000312438 1844 ntAPPRIS P3 TSL 1 (best) BASIC15.84■□□□□ 0.13
CDH3P22223 SEPT8-205ENST00000378701 1817 ntTSL 2 BASIC15.84■□□□□ 0.13
CDH3P22223 GRIN2A-201ENST00000330684 5031 ntAPPRIS P1 TSL 1 (best) BASIC15.84■□□□□ 0.13
CDH3P22223 EIF5A-206ENST00000571955 1366 ntAPPRIS P1 TSL 5 BASIC15.84■□□□□ 0.13
CDH3P22223 SOWAHA-201ENST00000378693 3211 ntAPPRIS P1 BASIC15.84■□□□□ 0.13
CDH3P22223 SMG1P3-206ENST00000522841 2774 ntTSL 2 BASIC15.84■□□□□ 0.13
CDH3P22223 NR6A1-205ENST00000487099 7031 ntAPPRIS P3 TSL 1 (best) BASIC15.84■□□□□ 0.13
CDH3P22223 RBM14-201ENST00000310137 2828 ntAPPRIS P1 TSL 1 (best) BASIC15.84■□□□□ 0.13
CDH3P22223 MICALL1-201ENST00000215957 4710 ntAPPRIS P1 TSL 1 (best) BASIC15.84■□□□□ 0.13
CDH3P22223 MATN3-202ENST00000421259 1443 ntAPPRIS ALT2 TSL 1 (best) BASIC15.84■□□□□ 0.13
CDH3P22223 CCDC130-204ENST00000586600 1922 ntAPPRIS P1 TSL 5 BASIC15.84■□□□□ 0.13
CDH3P22223 ANKMY1-203ENST00000373318 2449 ntTSL 1 (best) BASIC15.84■□□□□ 0.13
CDH3P22223 ADAMTS4-201ENST00000367995 1961 ntTSL 1 (best) BASIC15.84■□□□□ 0.13
CDH3P22223 SEPT5-204ENST00000406395 1974 ntTSL 5 BASIC15.84■□□□□ 0.13
CDH3P22223 PPM1J-202ENST00000464951 2474 ntTSL 1 (best) BASIC15.84■□□□□ 0.13
CDH3P22223 TRPV4-207ENST00000541794 2475 ntTSL 1 (best) BASIC15.84■□□□□ 0.13
CDH3P22223 GOLGA2P2Y-202ENST00000423852 1506 ntBASIC15.84■□□□□ 0.13
CDH3P22223 NFYC-210ENST00000425457 1536 ntTSL 2 BASIC15.84■□□□□ 0.13
CDH3P22223 PPP4R3A-205ENST00000554684 4108 ntAPPRIS P1 TSL 1 (best) BASIC15.83■□□□□ 0.13
CDH3P22223 GPSM1-205ENST00000440944 3633 ntAPPRIS P2 TSL 5 BASIC15.83■□□□□ 0.13
CDH3P22223 ZFAND6-211ENST00000559157 1559 ntTSL 2 BASIC15.83■□□□□ 0.13
CDH3P22223 FAM104A-201ENST00000403627 2798 ntAPPRIS P1 TSL 1 (best) BASIC15.83■□□□□ 0.13
CDH3P22223 CEP19-202ENST00000409690 2201 ntAPPRIS P2 TSL 1 (best) BASIC15.83■□□□□ 0.13
CDH3P22223 CPSF4-201ENST00000292476 1691 ntAPPRIS P3 TSL 1 (best) BASIC15.83■□□□□ 0.13
CDH3P22223 COG3-201ENST00000349995 4498 ntAPPRIS P1 TSL 1 (best) BASIC15.83■□□□□ 0.13
CDH3P22223 HSF5-201ENST00000323777 4094 ntAPPRIS P1 TSL 1 (best) BASIC15.83■□□□□ 0.12
CDH3P22223 PCGF1-201ENST00000233630 1792 ntAPPRIS P1 TSL 1 (best) BASIC15.83■□□□□ 0.12
CDH3P22223 MYOD1-201ENST00000250003 1801 ntAPPRIS P1 TSL 1 (best) BASIC15.83■□□□□ 0.12
CDH3P22223 ABLIM2-202ENST00000361581 2472 ntAPPRIS ALT2 TSL 1 (best) BASIC15.83■□□□□ 0.12
CDH3P22223 C16orf92-201ENST00000300575 895 ntAPPRIS P2 TSL 1 (best) BASIC15.83■□□□□ 0.12
CDH3P22223 LSM1-201ENST00000311351 1147 ntAPPRIS P1 TSL 1 (best) BASIC15.83■□□□□ 0.12
Retrieved 100 of 98,524 protein–RNA pairs in 31.8 ms