Protein–RNA interactions for Protein: P02656

APOC3, Apolipoprotein C-III, humanhuman

Predictions only

Length 99 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
APOC3P02656 MKL1-201ENST00000355630 4496 ntTSL 1 (best) BASIC12.93□□□□□ -0.34
APOC3P02656 MCF2L-204ENST00000375608 3648 ntTSL 5 BASIC12.93□□□□□ -0.34
APOC3P02656 SPATA6L-207ENST00000475086 1444 ntAPPRIS P1 TSL 2 BASIC12.93□□□□□ -0.34
APOC3P02656 APBB1-217ENST00000608645 1925 ntTSL 5 BASIC12.93□□□□□ -0.34
APOC3P02656 HTR3A-205ENST00000504030 2432 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
APOC3P02656 ANK1-205ENST00000347528 8237 ntAPPRIS P4 TSL 1 (best) BASIC12.93□□□□□ -0.34
APOC3P02656 MAGEA8-205ENST00000542674 2084 ntAPPRIS P1 TSL 3 BASIC12.93□□□□□ -0.34
APOC3P02656 HAUS8-201ENST00000253669 1568 ntAPPRIS P3 TSL 1 (best) BASIC12.93□□□□□ -0.34
APOC3P02656 SFRP1-202ENST00000379845 3873 ntTSL 2 BASIC12.93□□□□□ -0.34
APOC3P02656 CTBP1-AS-201ENST00000625256 3886 ntTSL 1 (best) BASIC12.93□□□□□ -0.34
APOC3P02656 TBRG4-201ENST00000258770 2243 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
APOC3P02656 LINC01138-206ENST00000622328 2212 ntTSL 2 BASIC12.93□□□□□ -0.34
APOC3P02656 SNCAIP-207ENST00000504884 1885 ntTSL 1 (best) BASIC12.93□□□□□ -0.34
APOC3P02656 STRA6-202ENST00000395105 2800 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
APOC3P02656 PSMC1-201ENST00000261303 4448 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
APOC3P02656 CIRBP-215ENST00000588030 1509 ntAPPRIS P3 TSL 5 BASIC12.93□□□□□ -0.34
APOC3P02656 CELF6-204ENST00000543764 1676 ntTSL 2 BASIC12.93□□□□□ -0.34
APOC3P02656 ACADM-202ENST00000370841 2619 ntAPPRIS P3 TSL 1 (best) BASIC12.92□□□□□ -0.34
APOC3P02656 SLC7A8-212ENST00000529705 1819 ntTSL 2 BASIC12.92□□□□□ -0.34
APOC3P02656 VIPAS39-202ENST00000343765 2761 ntAPPRIS P1 TSL 1 (best) BASIC12.92□□□□□ -0.34
APOC3P02656 CDYL-205ENST00000449732 2139 ntTSL 2 BASIC12.92□□□□□ -0.34
APOC3P02656 CYP1A1-207ENST00000567032 2107 ntAPPRIS P1 TSL 1 (best) BASIC12.92□□□□□ -0.34
APOC3P02656 ADGRG2-207ENST00000379869 4768 ntAPPRIS ALT2 TSL 1 (best) BASIC12.92□□□□□ -0.34
APOC3P02656 ZMYND15-201ENST00000269289 2448 ntTSL 5 BASIC12.92□□□□□ -0.34
APOC3P02656 PAX6-202ENST00000379107 2579 ntAPPRIS P4 TSL 5 BASIC12.92□□□□□ -0.34
APOC3P02656 CERKL-203ENST00000374969 1330 ntTSL 1 (best) BASIC12.92□□□□□ -0.34
APOC3P02656 MYO16-203ENST00000357550 6779 ntAPPRIS P3 TSL 1 (best) BASIC12.92□□□□□ -0.34
APOC3P02656 PTGER3-203ENST00000354608 1470 ntAPPRIS ALT2 TSL 5 BASIC12.92□□□□□ -0.34
APOC3P02656 MAP7D3-201ENST00000316077 4567 ntAPPRIS P3 TSL 1 (best) BASIC12.92□□□□□ -0.34
APOC3P02656 LHX9-204ENST00000367391 1623 ntTSL 5 BASIC12.92□□□□□ -0.34
APOC3P02656 MRPL4-203ENST00000393733 1620 ntTSL 5 BASIC12.92□□□□□ -0.34
APOC3P02656 NR1H3-211ENST00000441012 1637 ntAPPRIS P1 TSL 1 (best) BASIC12.92□□□□□ -0.34
APOC3P02656 CASKIN2-205ENST00000581870 1612 ntTSL 2 BASIC12.92□□□□□ -0.34
APOC3P02656 YME1L1-202ENST00000375972 2517 ntTSL 1 (best) BASIC12.92□□□□□ -0.34
APOC3P02656 SIGLEC16-202ENST00000602139 2510 ntTSL 5 BASIC12.92□□□□□ -0.34
APOC3P02656 HARS2-201ENST00000230771 2483 ntAPPRIS P1 TSL 1 (best) BASIC12.92□□□□□ -0.34
APOC3P02656 CPT1C-202ENST00000323446 2783 ntAPPRIS P3 TSL 1 (best) BASIC12.92□□□□□ -0.34
APOC3P02656 ARAP1-202ENST00000359373 5767 ntAPPRIS ALT2 TSL 2 BASIC12.92□□□□□ -0.34
APOC3P02656 NPM3-201ENST00000370110 877 ntAPPRIS P1 TSL 1 (best) BASIC12.92□□□□□ -0.34
APOC3P02656 TMEM240-201ENST00000378733 718 ntAPPRIS P1 TSL 2 BASIC12.92□□□□□ -0.34
APOC3P02656 KRT18P29-201ENST00000397031 1267 ntBASIC12.92□□□□□ -0.34
APOC3P02656 TMPRSS2-202ENST00000398585 3240 ntTSL 2 BASIC12.92□□□□□ -0.34
APOC3P02656 AC019068.1-201ENST00000415226 552 ntTSL 4 BASIC12.92□□□□□ -0.34
APOC3P02656 COLEC11-209ENST00000418971 1595 ntTSL 2 BASIC12.92□□□□□ -0.34
APOC3P02656 LINC00163-201ENST00000434081 2155 ntTSL 1 (best) BASIC12.92□□□□□ -0.34
APOC3P02656 AC242426.3-201ENST00000440377 1571 ntTSL 2 BASIC12.92□□□□□ -0.34
APOC3P02656 ARF3-202ENST00000447318 1089 ntTSL 2 BASIC12.92□□□□□ -0.34
APOC3P02656 ARF3-208ENST00000541959 807 ntAPPRIS P1 TSL 5 BASIC12.92□□□□□ -0.34
APOC3P02656 GTF2IRD2B-206ENST00000614064 573 ntTSL 1 (best) BASIC12.92□□□□□ -0.34
APOC3P02656 MAP7-202ENST00000432797 4375 ntAPPRIS ALT2 TSL 2 BASIC12.92□□□□□ -0.34
APOC3P02656 SLC35G1-201ENST00000371408 3490 ntAPPRIS P3 TSL 2 BASIC12.92□□□□□ -0.34
APOC3P02656 PRDM15-207ENST00000447207 4928 ntAPPRIS ALT2 TSL 5 BASIC12.92□□□□□ -0.34
APOC3P02656 NOX5-204ENST00000455873 2277 ntAPPRIS ALT2 TSL 1 (best) BASIC12.92□□□□□ -0.34
APOC3P02656 SLC4A5-201ENST00000346834 6233 ntAPPRIS P4 TSL 5 BASIC12.92□□□□□ -0.34
APOC3P02656 SLC1A1-201ENST00000262352 3722 ntAPPRIS P1 TSL 1 (best) BASIC12.92□□□□□ -0.34
APOC3P02656 P2RX3-201ENST00000263314 1831 ntAPPRIS P1 TSL 1 (best) BASIC12.92□□□□□ -0.34
APOC3P02656 ACSM2A-203ENST00000417235 1835 ntTSL 2 BASIC12.92□□□□□ -0.34
APOC3P02656 DUSP11-201ENST00000272444 1653 ntAPPRIS P1 TSL 1 (best) BASIC12.92□□□□□ -0.34
APOC3P02656 C12orf42-205ENST00000548048 1532 ntAPPRIS ALT2 TSL 5 BASIC12.92□□□□□ -0.34
APOC3P02656 C15orf39-202ENST00000394987 4430 ntAPPRIS P2 TSL 1 (best) BASIC12.92□□□□□ -0.34
APOC3P02656 THAP2-201ENST00000308086 5719 ntAPPRIS P1 TSL 1 (best) BASIC12.92□□□□□ -0.34
APOC3P02656 TMEM260-201ENST00000261556 4264 ntAPPRIS P1 TSL 2 BASIC12.92□□□□□ -0.34
APOC3P02656 RWDD4-206ENST00000512740 1393 ntTSL 5 BASIC12.92□□□□□ -0.34
APOC3P02656 FUT8-202ENST00000358307 2664 ntTSL 1 (best) BASIC12.92□□□□□ -0.34
APOC3P02656 HGNC:18790-201ENST00000397958 2650 ntAPPRIS P1 TSL 2 BASIC12.92□□□□□ -0.34
APOC3P02656 PCDHGA3-203ENST00000619750 2695 ntAPPRIS ALT2 BASIC12.92□□□□□ -0.34
APOC3P02656 THUMPD3-210ENST00000515662 2390 ntAPPRIS P1 TSL 1 (best) BASIC12.92□□□□□ -0.34
APOC3P02656 PHTF2-206ENST00000422959 3525 ntAPPRIS P4 TSL 5 BASIC12.92□□□□□ -0.34
APOC3P02656 PSIP1-203ENST00000380733 3391 ntAPPRIS P1 TSL 1 (best) BASIC12.92□□□□□ -0.34
APOC3P02656 MIR193BHG-211ENST00000641433 5365 ntBASIC12.92□□□□□ -0.34
APOC3P02656 AC011474.4-201ENST00000623523 2076 ntBASIC12.92□□□□□ -0.34
APOC3P02656 UNK-205ENST00000589666 3925 ntAPPRIS P1 TSL 1 (best) BASIC12.92□□□□□ -0.34
APOC3P02656 MIR155HG-201ENST00000456917 1600 ntTSL 5 BASIC12.91□□□□□ -0.34
APOC3P02656 SAFB-211ENST00000592224 3014 ntAPPRIS ALT2 TSL 1 (best) BASIC12.91□□□□□ -0.34
APOC3P02656 NRCAM-217ENST00000613830 3025 ntTSL 1 (best) BASIC12.91□□□□□ -0.34
APOC3P02656 C19orf66-209ENST00000591813 1481 ntAPPRIS ALT2 TSL 1 (best) BASIC12.91□□□□□ -0.34
APOC3P02656 CCT2-202ENST00000543146 2189 ntTSL 2 BASIC12.91□□□□□ -0.34
APOC3P02656 SLC9A8-201ENST00000361573 6094 ntAPPRIS P1 TSL 1 (best) BASIC12.91□□□□□ -0.34
APOC3P02656 DPP9-210ENST00000597849 2025 ntTSL 5 BASIC12.91□□□□□ -0.34
APOC3P02656 PIGT-246ENST00000639499 2021 ntTSL 5 BASIC12.91□□□□□ -0.34
APOC3P02656 CGREF1-206ENST00000405600 1346 ntAPPRIS P2 TSL 4 BASIC12.91□□□□□ -0.34
APOC3P02656 FUT3-201ENST00000303225 2584 ntAPPRIS P1 TSL 1 (best) BASIC12.91□□□□□ -0.34
APOC3P02656 CAP1-203ENST00000372797 3105 ntAPPRIS P3 TSL 1 (best) BASIC12.91□□□□□ -0.34
APOC3P02656 SLC16A1-201ENST00000369626 3910 ntAPPRIS P1 TSL 1 (best) BASIC12.91□□□□□ -0.34
APOC3P02656 NSD2-203ENST00000382888 2666 ntTSL 1 (best) BASIC12.91□□□□□ -0.34
APOC3P02656 TUFT1-201ENST00000353024 2107 ntTSL 2 BASIC12.91□□□□□ -0.34
APOC3P02656 FAM168B-202ENST00000409185 5285 ntAPPRIS P1 TSL 1 (best) BASIC12.91□□□□□ -0.34
APOC3P02656 PRAMEF20-201ENST00000316412 1597 ntAPPRIS P1 TSL 5 BASIC12.91□□□□□ -0.34
APOC3P02656 ANAPC5-201ENST00000261819 2513 ntAPPRIS P1 TSL 1 (best) BASIC12.91□□□□□ -0.34
APOC3P02656 TMEM25-202ENST00000354064 1965 ntTSL 2 BASIC12.91□□□□□ -0.34
APOC3P02656 LINC01105-206ENST00000456327 1434 ntTSL 5 BASIC12.91□□□□□ -0.34
APOC3P02656 SSTR3-201ENST00000610913 4100 ntAPPRIS P1 TSL 1 (best) BASIC12.91□□□□□ -0.34
APOC3P02656 ZNF821-203ENST00000446827 1822 ntTSL 1 (best) BASIC12.91□□□□□ -0.34
APOC3P02656 PRKD1-202ENST00000415220 3189 ntAPPRIS ALT2 TSL 5 BASIC12.91□□□□□ -0.34
APOC3P02656 FUT8-203ENST00000360689 5166 ntAPPRIS P1 TSL 1 (best) BASIC12.91□□□□□ -0.34
APOC3P02656 PIK3R3-203ENST00000420542 5174 ntAPPRIS P1 TSL 1 (best) BASIC12.91□□□□□ -0.34
APOC3P02656 COL18A1-AS1-201ENST00000397787 3425 ntTSL 1 (best) BASIC12.91□□□□□ -0.34
APOC3P02656 BX276092.2-201ENST00000417668 665 ntBASIC12.91□□□□□ -0.34
APOC3P02656 ZNF717-203ENST00000477374 1169 ntTSL 2 BASIC12.91□□□□□ -0.34
APOC3P02656 AC008825.1-201ENST00000504398 452 ntTSL 3 BASIC12.91□□□□□ -0.34
Retrieved 100 of 98,524 protein–RNA pairs in 35.9 ms