Protein–RNA interactions for Protein: O75131

CPNE3, Copine-3, humanhuman

Known RBP Predictions only

Length 537 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CPNE3O75131 PAGE5-201ENST00000289619 741 ntAPPRIS P3 TSL 1 (best) BASIC15.51■□□□□ 0.07
CPNE3O75131 CCDC84-201ENST00000334418 1202 ntAPPRIS P1 TSL 1 (best) BASIC15.51■□□□□ 0.07
CPNE3O75131 SIKE1-203ENST00000369528 5506 ntAPPRIS ALT1 TSL 1 (best) BASIC15.51■□□□□ 0.07
CPNE3O75131 MIR661-201ENST00000384842 89 ntBASIC15.51■□□□□ 0.07
CPNE3O75131 NDUFA3-204ENST00000391764 267 ntTSL 3 BASIC15.51■□□□□ 0.07
CPNE3O75131 CYSRT1-201ENST00000409414 1297 ntAPPRIS P1 TSL 1 (best) BASIC15.51■□□□□ 0.07
CPNE3O75131 RNASEH1-AS1-202ENST00000438436 1218 ntTSL 1 (best) BASIC15.51■□□□□ 0.07
CPNE3O75131 S100A6-205ENST00000496817 673 ntAPPRIS P1 TSL 2 BASIC15.51■□□□□ 0.07
CPNE3O75131 TRMT112-206ENST00000544844 1106 ntAPPRIS P3 TSL 1 (best) BASIC15.51■□□□□ 0.07
CPNE3O75131 AL110118.2-203ENST00000557574 554 ntAPPRIS P1 TSL 4 BASIC15.51■□□□□ 0.07
CPNE3O75131 AC105021.1-202ENST00000570572 669 ntBASIC15.51■□□□□ 0.07
CPNE3O75131 AC087645.2-202ENST00000586583 643 ntTSL 4 BASIC15.51■□□□□ 0.07
CPNE3O75131 AL589739.1-201ENST00000607720 493 ntBASIC15.51■□□□□ 0.07
CPNE3O75131 HDDC2-203ENST00000608284 538 ntTSL 3 BASIC15.51■□□□□ 0.07
CPNE3O75131 AC009118.2-201ENST00000613275 655 ntBASIC15.51■□□□□ 0.07
CPNE3O75131 LAMTOR5-208ENST00000614544 846 ntTSL 1 (best) BASIC15.51■□□□□ 0.07
CPNE3O75131 FAM92A-219ENST00000620645 1014 ntAPPRIS ALT2 TSL 5 BASIC15.51■□□□□ 0.07
CPNE3O75131 AC090164.4-201ENST00000632451 313 ntTSL 5 BASIC15.51■□□□□ 0.07
CPNE3O75131 CACNB3-201ENST00000301050 2696 ntAPPRIS P1 TSL 1 (best) BASIC15.51■□□□□ 0.07
CPNE3O75131 BLOC1S5-202ENST00000397457 2684 ntAPPRIS P1 TSL 1 (best) BASIC15.51■□□□□ 0.07
CPNE3O75131 FDX1-201ENST00000260270 3206 ntAPPRIS P1 TSL 1 (best) BASIC15.51■□□□□ 0.07
CPNE3O75131 AIFM2-201ENST00000307864 3243 ntAPPRIS P1 TSL 1 (best) BASIC15.51■□□□□ 0.07
CPNE3O75131 AC006974.1-201ENST00000637928 1501 ntTSL 5 BASIC15.51■□□□□ 0.07
CPNE3O75131 DRC3-201ENST00000313838 2064 ntAPPRIS P1 TSL 5 BASIC15.51■□□□□ 0.07
CPNE3O75131 AL031731.1-201ENST00000642131 2094 ntBASIC15.51■□□□□ 0.07
CPNE3O75131 DGAT1-206ENST00000528718 3711 ntAPPRIS P1 TSL 1 (best) BASIC15.51■□□□□ 0.07
CPNE3O75131 ADGRA1-202ENST00000392607 4283 ntAPPRIS P2 TSL 5 BASIC15.51■□□□□ 0.07
CPNE3O75131 PCGF1-201ENST00000233630 1792 ntAPPRIS P1 TSL 1 (best) BASIC15.51■□□□□ 0.07
CPNE3O75131 RHBG-204ENST00000537040 1789 ntAPPRIS P1 TSL 1 (best) BASIC15.51■□□□□ 0.07
CPNE3O75131 ACTRT3-201ENST00000330368 2005 ntAPPRIS P1 TSL 1 (best) BASIC15.51■□□□□ 0.07
CPNE3O75131 RIMS1-213ENST00000517960 4428 ntTSL 5 BASIC15.51■□□□□ 0.07
CPNE3O75131 RIMS1-215ENST00000520567 4442 ntTSL 5 BASIC15.51■□□□□ 0.07
CPNE3O75131 NCALD-217ENST00000521599 2289 ntAPPRIS P1 TSL 1 (best) BASIC15.51■□□□□ 0.07
CPNE3O75131 FLVCR1-AS1-201ENST00000356684 2525 ntTSL 2 BASIC15.51■□□□□ 0.07
CPNE3O75131 CPVL-202ENST00000396276 1739 ntAPPRIS P1 TSL 1 (best) BASIC15.51■□□□□ 0.07
CPNE3O75131 TMEM120A-201ENST00000417509 1444 ntTSL 2 BASIC15.51■□□□□ 0.07
CPNE3O75131 TRPM2-208ENST00000621064 1669 ntTSL 5 BASIC15.51■□□□□ 0.07
CPNE3O75131 TRPV4-205ENST00000537083 2436 ntTSL 1 (best) BASIC15.51■□□□□ 0.07
CPNE3O75131 RBPMS-204ENST00000397323 2941 ntAPPRIS P3 TSL 1 (best) BASIC15.5■□□□□ 0.07
CPNE3O75131 SH3BP2-207ENST00000503393 9158 ntTSL 1 (best) BASIC15.5■□□□□ 0.07
CPNE3O75131 ZNF687-201ENST00000324048 5378 ntAPPRIS P1 TSL 1 (best) BASIC15.5■□□□□ 0.07
CPNE3O75131 LCK-202ENST00000336890 2117 ntAPPRIS P1 TSL 1 (best) BASIC15.5■□□□□ 0.07
CPNE3O75131 FTSJ1-202ENST00000348411 1892 ntAPPRIS P4 TSL 1 (best) BASIC15.5■□□□□ 0.07
CPNE3O75131 ESR2-206ENST00000553796 1634 ntTSL 1 (best) BASIC15.5■□□□□ 0.07
CPNE3O75131 TINF2-208ENST00000558566 1874 ntAPPRIS ALT2 TSL 2 BASIC15.5■□□□□ 0.07
CPNE3O75131 MMP25-201ENST00000336577 3554 ntAPPRIS P1 TSL 1 (best) BASIC15.5■□□□□ 0.07
CPNE3O75131 LEMD3-201ENST00000308330 4764 ntAPPRIS P1 TSL 1 (best) BASIC15.5■□□□□ 0.07
CPNE3O75131 CYB5R3-204ENST00000407332 1849 ntTSL 1 (best) BASIC15.5■□□□□ 0.07
CPNE3O75131 SLC12A9-201ENST00000354161 3273 ntAPPRIS P1 TSL 1 (best) BASIC15.5■□□□□ 0.07
CPNE3O75131 EML3-202ENST00000394773 3256 ntAPPRIS P2 TSL 1 (best) BASIC15.5■□□□□ 0.07
CPNE3O75131 RHCE-201ENST00000294413 1591 ntAPPRIS P2 TSL 1 (best) BASIC15.5■□□□□ 0.07
CPNE3O75131 AC022144.1-201ENST00000602255 1580 ntBASIC15.5■□□□□ 0.07
CPNE3O75131 TMEM19-201ENST00000266673 5656 ntAPPRIS P1 TSL 1 (best) BASIC15.5■□□□□ 0.07
CPNE3O75131 TEAD3-204ENST00000639578 1308 ntAPPRIS P2 TSL 1 (best) BASIC15.5■□□□□ 0.07
CPNE3O75131 AL139300.1-201ENST00000472726 2505 ntAPPRIS P1 TSL 2 BASIC15.5■□□□□ 0.07
CPNE3O75131 DFNA5-207ENST00000419307 2265 ntTSL 1 (best) BASIC15.5■□□□□ 0.07
CPNE3O75131 EFNB3-201ENST00000226091 3222 ntAPPRIS P1 TSL 1 (best) BASIC15.5■□□□□ 0.07
CPNE3O75131 ZNF133-204ENST00000396026 2717 ntAPPRIS P3 TSL 3 BASIC15.5■□□□□ 0.07
CPNE3O75131 CCDC127-201ENST00000296824 9342 ntAPPRIS P1 TSL 1 (best) BASIC15.5■□□□□ 0.07
CPNE3O75131 PDE4C-201ENST00000262805 2472 ntAPPRIS ALT2 TSL 1 (best) BASIC15.5■□□□□ 0.07
CPNE3O75131 DXO-203ENST00000375356 1533 ntAPPRIS P1 TSL 1 (best) BASIC15.5■□□□□ 0.07
CPNE3O75131 TTC24-202ENST00000368237 1969 ntAPPRIS P1 TSL 5 BASIC15.5■□□□□ 0.07
CPNE3O75131 ARHGEF28-201ENST00000296794 5246 ntTSL 5 BASIC15.5■□□□□ 0.07
CPNE3O75131 C1QA-201ENST00000374642 1143 ntAPPRIS P1 TSL 1 (best) BASIC15.5■□□□□ 0.07
CPNE3O75131 SNCA-205ENST00000394991 1290 ntAPPRIS P1 TSL 1 (best) BASIC15.5■□□□□ 0.07
CPNE3O75131 TSSK5P-201ENST00000423978 907 ntBASIC15.5■□□□□ 0.07
CPNE3O75131 AL669831.5-201ENST00000434264 844 ntTSL 5 BASIC15.5■□□□□ 0.07
CPNE3O75131 TMEM120A-203ENST00000439537 1161 ntTSL 1 (best) BASIC15.5■□□□□ 0.07
CPNE3O75131 AC139713.2-206ENST00000499587 566 ntTSL 4 BASIC15.5■□□□□ 0.07
CPNE3O75131 AC055854.1-201ENST00000523627 570 ntTSL 4 BASIC15.5■□□□□ 0.07
CPNE3O75131 AKIP1-211ENST00000534506 576 ntTSL 3 BASIC15.5■□□□□ 0.07
CPNE3O75131 PPP1R14B-203ENST00000542235 920 ntTSL 1 (best) BASIC15.5■□□□□ 0.07
CPNE3O75131 RN7SL828P-201ENST00000607615 303 ntBASIC15.5■□□□□ 0.07
CPNE3O75131 HAUS2-211ENST00000639412 375 ntTSL 2 BASIC15.5■□□□□ 0.07
CPNE3O75131 TBC1D25-201ENST00000376771 4042 ntAPPRIS P1 TSL 1 (best) BASIC15.5■□□□□ 0.07
CPNE3O75131 TXNDC2-204ENST00000536353 1703 ntTSL 5 BASIC15.5■□□□□ 0.07
CPNE3O75131 CUX1-213ENST00000549414 4452 ntAPPRIS ALT2 TSL 5 BASIC15.5■□□□□ 0.07
CPNE3O75131 SSR4-201ENST00000320857 1671 ntAPPRIS P1 TSL 2 BASIC15.5■□□□□ 0.07
CPNE3O75131 PTHLH-201ENST00000201015 1872 ntAPPRIS P3 TSL 3 BASIC15.5■□□□□ 0.07
CPNE3O75131 PRDM1-203ENST00000369096 5164 ntAPPRIS P1 TSL 1 (best) BASIC15.5■□□□□ 0.07
CPNE3O75131 ARID4B-202ENST00000349213 5811 ntTSL 1 (best) BASIC15.5■□□□□ 0.07
CPNE3O75131 PTPRO-209ENST00000543886 2070 ntTSL 1 (best) BASIC15.5■□□□□ 0.07
CPNE3O75131 TDRD6-201ENST00000316081 6817 ntAPPRIS P3 TSL 1 (best) BASIC15.5■□□□□ 0.07
CPNE3O75131 ATXN7-213ENST00000538065 6842 ntAPPRIS ALT2 TSL 1 (best) BASIC15.5■□□□□ 0.07
CPNE3O75131 ASXL1-210ENST00000613218 7038 ntAPPRIS ALT2 TSL 5 BASIC15.5■□□□□ 0.07
CPNE3O75131 HNF1A-212ENST00000544413 2014 ntTSL 1 (best) BASIC15.5■□□□□ 0.07
CPNE3O75131 BCL2L2-PABPN1-203ENST00000557008 1366 ntAPPRIS P1 TSL 5 BASIC15.49■□□□□ 0.07
CPNE3O75131 IL11RA-215ENST00000602473 1388 ntTSL 1 (best) BASIC15.49■□□□□ 0.07
CPNE3O75131 PICALM-219ENST00000532317 3474 ntTSL 1 (best) BASIC15.49■□□□□ 0.07
CPNE3O75131 AC006538.1-201ENST00000567905 1585 ntBASIC15.49■□□□□ 0.07
CPNE3O75131 CYP2U1-201ENST00000332884 4944 ntAPPRIS P1 TSL 1 (best) BASIC15.49■□□□□ 0.07
CPNE3O75131 ABCB6-201ENST00000265316 3016 ntAPPRIS P1 TSL 1 (best) BASIC15.49■□□□□ 0.07
CPNE3O75131 CLIC5-202ENST00000339561 2390 ntAPPRIS P1 TSL 1 (best) BASIC15.49■□□□□ 0.07
CPNE3O75131 ANKRD24-206ENST00000600132 4026 ntAPPRIS P2 TSL 5 BASIC15.49■□□□□ 0.07
CPNE3O75131 PFKP-202ENST00000381075 2769 ntTSL 2 BASIC15.49■□□□□ 0.07
CPNE3O75131 CORO2B-201ENST00000261861 3569 ntAPPRIS P1 TSL 1 (best) BASIC15.49■□□□□ 0.07
CPNE3O75131 CORO2B-204ENST00000566799 3566 ntTSL 1 (best) BASIC15.49■□□□□ 0.07
CPNE3O75131 RAD51C-215ENST00000583539 1319 ntAPPRIS ALT2 TSL 2 BASIC15.49■□□□□ 0.07
CPNE3O75131 SAP130-203ENST00000357702 4173 ntTSL 1 (best) BASIC15.49■□□□□ 0.07
CPNE3O75131 SYT6-201ENST00000369547 4369 ntTSL 1 (best) BASIC15.49■□□□□ 0.07
Retrieved 100 of 98,524 protein–RNA pairs in 52 ms