Protein–RNA interactions for Protein: O43679

LDB2, LIM domain-binding protein 2, humanhuman

Predictions only

Length 373 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LDB2O43679 TCTN1-202ENST00000397655 1879 ntTSL 1 (best) BASIC16.06■□□□□ 0.16
LDB2O43679 PHB-201ENST00000300408 1832 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
LDB2O43679 AC012507.2-203ENST00000415628 1765 ntTSL 3 BASIC16.06■□□□□ 0.16
LDB2O43679 KRT8-215ENST00000552150 1687 ntTSL 1 (best) BASIC16.06■□□□□ 0.16
LDB2O43679 MARCH2-208ENST00000602117 1667 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
LDB2O43679 ITGB1BP1-204ENST00000360635 4859 ntAPPRIS P1 TSL 5 BASIC16.06■□□□□ 0.16
LDB2O43679 CBWD2-204ENST00000433343 1411 ntTSL 1 (best) BASIC16.06■□□□□ 0.16
LDB2O43679 AC105339.1-201ENST00000440089 1362 ntTSL 1 (best) BASIC16.06■□□□□ 0.16
LDB2O43679 OR52W1-201ENST00000311352 1114 ntAPPRIS P1 BASIC16.06■□□□□ 0.16
LDB2O43679 HSD17B8-203ENST00000374662 990 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
LDB2O43679 SNRPB-201ENST00000381342 1154 ntAPPRIS ALT1 TSL 1 (best) BASIC16.06■□□□□ 0.16
LDB2O43679 YWHAZ-203ENST00000395951 964 ntAPPRIS P1 TSL 2 BASIC16.06■□□□□ 0.16
LDB2O43679 AL353597.1-201ENST00000414875 998 ntTSL 5 BASIC16.06■□□□□ 0.16
LDB2O43679 SNRPB-202ENST00000438552 1008 ntAPPRIS P4 TSL 1 (best) BASIC16.06■□□□□ 0.16
LDB2O43679 AC007364.1-201ENST00000449714 1022 ntTSL 2 BASIC16.06■□□□□ 0.16
LDB2O43679 AL512356.2-201ENST00000546955 174 ntBASIC16.06■□□□□ 0.16
LDB2O43679 CMTM3-205ENST00000562707 714 ntAPPRIS P1 TSL 3 BASIC16.06■□□□□ 0.16
LDB2O43679 CEMP1-201ENST00000565480 519 ntAPPRIS ALT2 TSL 3 BASIC16.06■□□□□ 0.16
LDB2O43679 AC007967.4-201ENST00000614700 386 ntBASIC16.06■□□□□ 0.16
LDB2O43679 AL157832.3-201ENST00000635764 1005 ntTSL 5 BASIC16.06■□□□□ 0.16
LDB2O43679 CRY1-201ENST00000008527 3267 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
LDB2O43679 INTS4P1-202ENST00000587624 2985 ntTSL 5 BASIC16.06■□□□□ 0.16
LDB2O43679 KCNC2-209ENST00000550433 2931 ntAPPRIS ALT2 TSL 1 (best) BASIC16.06■□□□□ 0.16
LDB2O43679 RDX-201ENST00000343115 4491 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
LDB2O43679 ALPL-204ENST00000374840 2589 ntAPPRIS P3 TSL 1 (best) BASIC16.06■□□□□ 0.16
LDB2O43679 ENDOV-212ENST00000520284 2500 ntTSL 2 BASIC16.06■□□□□ 0.16
LDB2O43679 CDK11B-208ENST00000629289 2490 ntTSL 5 BASIC16.06■□□□□ 0.16
LDB2O43679 SMARCA4-201ENST00000344626 5392 ntTSL 1 (best) BASIC16.06■□□□□ 0.16
LDB2O43679 CTPS2-201ENST00000359276 3629 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
LDB2O43679 CDKN2B-AS1-208ENST00000580576 2175 ntTSL 1 (best) BASIC16.06■□□□□ 0.16
LDB2O43679 SCN3B-202ENST00000392770 6061 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
LDB2O43679 CCDC59-201ENST00000256151 1983 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
LDB2O43679 SLC34A1-204ENST00000512593 1912 ntTSL 2 BASIC16.06■□□□□ 0.16
LDB2O43679 ATP6V0E2-AS1-201ENST00000461019 2973 ntTSL 1 (best) BASIC16.05■□□□□ 0.16
LDB2O43679 BUD13-202ENST00000375445 1793 ntAPPRIS ALT2 TSL 1 (best) BASIC16.05■□□□□ 0.16
LDB2O43679 MFGE8-215ENST00000566497 1689 ntAPPRIS P1 TSL 5 BASIC16.05■□□□□ 0.16
LDB2O43679 AL162727.3-201ENST00000635661 2787 ntBASIC16.05■□□□□ 0.16
LDB2O43679 SUN2-203ENST00000406622 2725 ntAPPRIS P1 TSL 2 BASIC16.05■□□□□ 0.16
LDB2O43679 PRX-202ENST00000324001 4855 ntTSL 1 (best) BASIC16.05■□□□□ 0.16
LDB2O43679 PELI2-201ENST00000267460 5909 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
LDB2O43679 GPR61-206ENST00000616874 2459 ntAPPRIS P1 TSL 2 BASIC16.05■□□□□ 0.16
LDB2O43679 STARD7-201ENST00000337288 3368 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
LDB2O43679 MED17-201ENST00000251871 5142 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
LDB2O43679 AKAP9-205ENST00000394564 1356 ntTSL 1 (best) BASIC16.05■□□□□ 0.16
LDB2O43679 ID3-201ENST00000374561 1251 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
LDB2O43679 IL32-205ENST00000396890 1067 ntAPPRIS ALT2 TSL 1 (best) BASIC16.05■□□□□ 0.16
LDB2O43679 LBH-203ENST00000404397 543 ntTSL 4 BASIC16.05■□□□□ 0.16
LDB2O43679 FBLN7-204ENST00000409667 1124 ntTSL 1 (best) BASIC16.05■□□□□ 0.16
LDB2O43679 PLAC9P1-202ENST00000433290 400 ntTSL 2 BASIC16.05■□□□□ 0.16
LDB2O43679 HLA-J-203ENST00000494367 1087 ntBASIC16.05■□□□□ 0.16
LDB2O43679 FAM86HP-203ENST00000511564 521 ntTSL 2 BASIC16.05■□□□□ 0.16
LDB2O43679 SYBU-219ENST00000528647 2995 ntAPPRIS P4 TSL 2 BASIC16.05■□□□□ 0.16
LDB2O43679 CYB561D1-209ENST00000533024 913 ntTSL 2 BASIC16.05■□□□□ 0.16
LDB2O43679 IL32-233ENST00000552664 731 ntAPPRIS P4 TSL 3 BASIC16.05■□□□□ 0.16
LDB2O43679 AC087392.4-201ENST00000574560 486 ntTSL 3 BASIC16.05■□□□□ 0.16
LDB2O43679 DM1-AS-201ENST00000586251 483 ntTSL 2 BASIC16.05■□□□□ 0.16
LDB2O43679 AL133215.2-201ENST00000609242 977 ntBASIC16.05■□□□□ 0.16
LDB2O43679 AC003101.2-201ENST00000612557 442 ntBASIC16.05■□□□□ 0.16
LDB2O43679 DIRC2-201ENST00000261038 3596 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
LDB2O43679 NAF1-201ENST00000274054 1907 ntAPPRIS P3 TSL 1 (best) BASIC16.05■□□□□ 0.16
LDB2O43679 CDK11B-204ENST00000407249 2677 ntTSL 1 (best) BASIC16.05■□□□□ 0.16
LDB2O43679 TOMM40-207ENST00000592434 3415 ntAPPRIS ALT2 TSL 2 BASIC16.05■□□□□ 0.16
LDB2O43679 LINC00391-201ENST00000433569 1844 ntTSL 5 BASIC16.05■□□□□ 0.16
LDB2O43679 PRAG1-202ENST00000622241 4639 ntAPPRIS P1 TSL 2 BASIC16.05■□□□□ 0.16
LDB2O43679 SENP6-205ENST00000447266 6501 ntAPPRIS ALT2 TSL 1 (best) BASIC16.05■□□□□ 0.16
LDB2O43679 SNCAIP-202ENST00000261368 3745 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
LDB2O43679 KRT27-201ENST00000301656 1612 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
LDB2O43679 PRKACG-201ENST00000377276 1585 ntAPPRIS P1 BASIC16.04■□□□□ 0.16
LDB2O43679 SPATA18-202ENST00000419395 2816 ntTSL 2 BASIC16.04■□□□□ 0.16
LDB2O43679 GNAL-202ENST00000334049 6535 ntTSL 1 (best) BASIC16.04■□□□□ 0.16
LDB2O43679 FBXL5-201ENST00000341285 3385 ntAPPRIS P3 TSL 1 (best) BASIC16.04■□□□□ 0.16
LDB2O43679 MGEA5-202ENST00000361464 5155 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
LDB2O43679 AC007495.1-201ENST00000501259 2678 ntTSL 1 (best) BASIC16.04■□□□□ 0.16
LDB2O43679 GAS2L2-201ENST00000604063 2661 ntAPPRIS ALT2 TSL 5 BASIC16.04■□□□□ 0.16
LDB2O43679 PHTF1-205ENST00000393357 3244 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
LDB2O43679 KRT8P37-201ENST00000451609 1420 ntBASIC16.04■□□□□ 0.16
LDB2O43679 PTPN5-201ENST00000358540 3135 ntTSL 1 (best) BASIC16.04■□□□□ 0.16
LDB2O43679 C14orf93-207ENST00000397382 1986 ntAPPRIS P1 TSL 5 BASIC16.04■□□□□ 0.16
LDB2O43679 Z99756.1-201ENST00000458463 1951 ntTSL 1 (best) BASIC16.04■□□□□ 0.16
LDB2O43679 GK2-201ENST00000358842 1942 ntAPPRIS P1 BASIC16.04■□□□□ 0.16
LDB2O43679 APP-204ENST00000357903 3543 ntAPPRIS ALT2 TSL 1 (best) BASIC16.04■□□□□ 0.16
LDB2O43679 ETV2-204ENST00000403402 1335 ntAPPRIS P3 TSL 1 (best) BASIC16.04■□□□□ 0.16
LDB2O43679 MINK1-202ENST00000355280 4961 ntAPPRIS P4 TSL 1 (best) BASIC16.04■□□□□ 0.16
LDB2O43679 MAPK8IP2-202ENST00000329492 3381 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
LDB2O43679 CTNNB1-210ENST00000453024 2841 ntTSL 2 BASIC16.04■□□□□ 0.16
LDB2O43679 UGDH-202ENST00000501493 2826 ntTSL 2 BASIC16.04■□□□□ 0.16
LDB2O43679 TMEM179B-201ENST00000333449 1023 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
LDB2O43679 AL139400.1-201ENST00000366220 510 ntBASIC16.04■□□□□ 0.16
LDB2O43679 IZUMO4-201ENST00000395296 869 ntTSL 2 BASIC16.04■□□□□ 0.16
LDB2O43679 RBM39-205ENST00000397370 612 ntTSL 2 BASIC16.04■□□□□ 0.16
LDB2O43679 AC091729.1-201ENST00000449721 869 ntTSL 3 BASIC16.04■□□□□ 0.16
LDB2O43679 AC025183.1-201ENST00000506335 425 ntTSL 4 BASIC16.04■□□□□ 0.16
LDB2O43679 FXYD6-209ENST00000530956 579 ntAPPRIS P2 TSL 2 BASIC16.04■□□□□ 0.16
LDB2O43679 LITAF-210ENST00000571976 548 ntTSL 2 BASIC16.04■□□□□ 0.16
LDB2O43679 LITAF-214ENST00000574703 486 ntTSL 2 BASIC16.04■□□□□ 0.16
LDB2O43679 MIR4453-201ENST00000584019 89 ntBASIC16.04■□□□□ 0.16
LDB2O43679 TRAPPC6A-202ENST00000585934 758 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
LDB2O43679 AC010615.2-202ENST00000597444 832 ntTSL 3 BASIC16.04■□□□□ 0.16
LDB2O43679 COLCA2-204ENST00000610738 975 ntAPPRIS P2 TSL 1 (best) BASIC16.04■□□□□ 0.16
LDB2O43679 C16orf58-201ENST00000327237 2793 ntAPPRIS P2 TSL 1 (best) BASIC16.04■□□□□ 0.16
Retrieved 100 of 98,524 protein–RNA pairs in 46.1 ms