Protein–RNA interactions for Protein: P61020

RAB5B, Ras-related protein Rab-5B, humanhuman

Predictions only

Length 215 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RAB5BP61020 LINC00926-202ENST00000502027 2141 ntTSL 2 BASIC12.63□□□□□ -0.39
RAB5BP61020 PHB2-213ENST00000546111 858 ntTSL 2 BASIC12.63□□□□□ -0.39
RAB5BP61020 COX4I1-202ENST00000561569 716 ntAPPRIS P1 TSL 2 BASIC12.63□□□□□ -0.39
RAB5BP61020 VPS53-216ENST00000574029 585 ntTSL 4 BASIC12.63□□□□□ -0.39
RAB5BP61020 AC069544.1-201ENST00000609399 999 ntBASIC12.63□□□□□ -0.39
RAB5BP61020 ALDH3A2-224ENST00000626500 995 ntTSL 5 BASIC12.63□□□□□ -0.39
RAB5BP61020 FHOD3-201ENST00000257209 4967 ntAPPRIS P3 TSL 1 (best) BASIC12.63□□□□□ -0.39
RAB5BP61020 NTM-202ENST00000374786 3190 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
RAB5BP61020 HIGD1A-201ENST00000321331 1373 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
RAB5BP61020 KCNK4-205ENST00000538767 1389 ntTSL 2 BASIC12.63□□□□□ -0.39
RAB5BP61020 TRAK1-201ENST00000327628 5293 ntAPPRIS P2 TSL 1 (best) BASIC12.63□□□□□ -0.39
RAB5BP61020 TSPAN3-210ENST00000561277 1592 ntTSL 5 BASIC12.63□□□□□ -0.39
RAB5BP61020 SLC22A20-204ENST00000530038 1673 ntBASIC12.63□□□□□ -0.39
RAB5BP61020 UBE2D3-210ENST00000453744 3990 ntAPPRIS ALT1 TSL 1 (best) BASIC12.63□□□□□ -0.39
RAB5BP61020 C9orf78-201ENST00000372447 1795 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
RAB5BP61020 ACTL6A-203ENST00000450518 1750 ntTSL 1 (best) BASIC12.63□□□□□ -0.39
RAB5BP61020 REXO1L8P-201ENST00000604378 1897 ntBASIC12.63□□□□□ -0.39
RAB5BP61020 MKL1-201ENST00000355630 4496 ntTSL 1 (best) BASIC12.63□□□□□ -0.39
RAB5BP61020 NCOR2-204ENST00000405201 8533 ntAPPRIS P4 TSL 1 (best) BASIC12.63□□□□□ -0.39
RAB5BP61020 RNF145-202ENST00000424310 3613 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
RAB5BP61020 TBC1D17-201ENST00000221543 2366 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
RAB5BP61020 AKAP1-201ENST00000314126 2380 ntTSL 1 (best) BASIC12.63□□□□□ -0.39
RAB5BP61020 TBC1D17-209ENST00000622860 2370 ntTSL 5 BASIC12.63□□□□□ -0.39
RAB5BP61020 ANO10-205ENST00000414522 2450 ntTSL 2 BASIC12.63□□□□□ -0.39
RAB5BP61020 MADD-203ENST00000349238 5873 ntAPPRIS ALT2 TSL 1 (best) BASIC12.63□□□□□ -0.39
RAB5BP61020 SELENON-201ENST00000354177 4227 ntAPPRIS ALT2 TSL 5 BASIC12.63□□□□□ -0.39
RAB5BP61020 HYOU1-220ENST00000617285 4529 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
RAB5BP61020 USP19-206ENST00000417901 4706 ntAPPRIS ALT2 TSL 1 (best) BASIC12.63□□□□□ -0.39
RAB5BP61020 SEZ6L-202ENST00000343706 2898 ntTSL 1 (best) BASIC12.63□□□□□ -0.39
RAB5BP61020 UBE2E3-201ENST00000392415 1347 ntAPPRIS P1 TSL 3 BASIC12.62□□□□□ -0.39
RAB5BP61020 TEX13A-202ENST00000609007 1349 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
RAB5BP61020 KIF25-AS1-201ENST00000414364 1420 ntTSL 2 BASIC12.62□□□□□ -0.39
RAB5BP61020 MAP7D3-201ENST00000316077 4567 ntAPPRIS P3 TSL 1 (best) BASIC12.62□□□□□ -0.39
RAB5BP61020 PEX13-204ENST00000444100 1533 ntTSL 1 (best) BASIC12.62□□□□□ -0.39
RAB5BP61020 ACOT7-204ENST00000377855 1614 ntAPPRIS P4 TSL 1 (best) BASIC12.62□□□□□ -0.39
RAB5BP61020 P2RY6-209ENST00000540342 1611 ntAPPRIS P1 TSL 2 BASIC12.62□□□□□ -0.39
RAB5BP61020 ANGPTL4-202ENST00000393962 1705 ntTSL 5 BASIC12.62□□□□□ -0.39
RAB5BP61020 RNF43-208ENST00000584437 5575 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
RAB5BP61020 AL512306.2-201ENST00000444037 2219 ntTSL 2 BASIC12.62□□□□□ -0.39
RAB5BP61020 CMBL-201ENST00000296658 2335 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
RAB5BP61020 NIM1K-201ENST00000326035 2313 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
RAB5BP61020 AAR2-201ENST00000320849 2430 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
RAB5BP61020 COL2A1-201ENST00000337299 4257 ntAPPRIS P3 TSL 1 (best) BASIC12.62□□□□□ -0.39
RAB5BP61020 STK26-202ENST00000394334 3288 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
RAB5BP61020 ZBTB17-201ENST00000375733 2770 ntAPPRIS ALT2 TSL 1 (best) BASIC12.62□□□□□ -0.39
RAB5BP61020 FUT8-202ENST00000358307 2664 ntTSL 1 (best) BASIC12.62□□□□□ -0.39
RAB5BP61020 PDXDC1-204ENST00000455313 2183 ntTSL 2 BASIC12.62□□□□□ -0.39
RAB5BP61020 PLCXD2-201ENST00000393934 2063 ntTSL 1 (best) BASIC12.62□□□□□ -0.39
RAB5BP61020 CSAD-203ENST00000379846 1962 ntTSL 5 BASIC12.62□□□□□ -0.39
RAB5BP61020 PTGER3-203ENST00000354608 1470 ntAPPRIS ALT2 TSL 5 BASIC12.62□□□□□ -0.39
RAB5BP61020 NXNL2-202ENST00000375855 1457 ntTSL 1 (best) BASIC12.62□□□□□ -0.39
RAB5BP61020 PYURF-201ENST00000273968 1361 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
RAB5BP61020 TSPY8-201ENST00000287721 1161 ntAPPRIS P5 TSL 1 (best) BASIC12.62□□□□□ -0.39
RAB5BP61020 GNGT2-201ENST00000300406 889 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
RAB5BP61020 ZNF580-201ENST00000325333 1261 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
RAB5BP61020 IZUMO4-203ENST00000395307 944 ntAPPRIS P3 TSL 1 (best) BASIC12.62□□□□□ -0.39
RAB5BP61020 GNAS-AS1-201ENST00000424094 1156 ntTSL 1 (best) BASIC12.62□□□□□ -0.39
RAB5BP61020 TSPY10-201ENST00000428845 1161 ntAPPRIS P5 TSL 1 (best) BASIC12.62□□□□□ -0.39
RAB5BP61020 AL355355.2-201ENST00000442321 338 ntBASIC12.62□□□□□ -0.39
RAB5BP61020 HAGLR-207ENST00000452365 661 ntTSL 4 BASIC12.62□□□□□ -0.39
RAB5BP61020 TSPY3-203ENST00000457222 1161 ntAPPRIS P5 TSL 1 (best) BASIC12.62□□□□□ -0.39
RAB5BP61020 MFSD4A-206ENST00000489709 1136 ntTSL 5 BASIC12.62□□□□□ -0.39
RAB5BP61020 ALKAL1-202ENST00000523939 536 ntAPPRIS ALT2 TSL 1 (best) BASIC12.62□□□□□ -0.39
RAB5BP61020 AC138028.5-201ENST00000566114 558 ntTSL 5 BASIC12.62□□□□□ -0.39
RAB5BP61020 AC008687.6-201ENST00000596318 630 ntBASIC12.62□□□□□ -0.39
RAB5BP61020 CD177-202ENST00000607855 536 ntTSL 1 (best) BASIC12.62□□□□□ -0.39
RAB5BP61020 MAZ-216ENST00000616501 991 ntTSL 5 BASIC12.62□□□□□ -0.39
RAB5BP61020 AC008622.2-201ENST00000617006 1229 ntBASIC12.62□□□□□ -0.39
RAB5BP61020 ACBD4-216ENST00000619916 1276 ntTSL 5 BASIC12.62□□□□□ -0.39
RAB5BP61020 CNTN1-203ENST00000547702 3033 ntTSL 2 BASIC12.62□□□□□ -0.39
RAB5BP61020 WNT3A-201ENST00000284523 2932 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
RAB5BP61020 DUSP18-204ENST00000403268 2920 ntTSL 1 (best) BASIC12.62□□□□□ -0.39
RAB5BP61020 TMEM117-207ENST00000551577 2643 ntTSL 1 (best) BASIC12.62□□□□□ -0.39
RAB5BP61020 TMEM260-201ENST00000261556 4264 ntAPPRIS P1 TSL 2 BASIC12.62□□□□□ -0.39
RAB5BP61020 CELP-203ENST00000624767 2414 ntTSL 5 BASIC12.62□□□□□ -0.39
RAB5BP61020 ABCB7-202ENST00000339447 2234 ntTSL 1 (best) BASIC12.62□□□□□ -0.39
RAB5BP61020 FLNA-203ENST00000369850 8382 ntAPPRIS ALT2 TSL 1 (best) BASIC12.62□□□□□ -0.39
RAB5BP61020 SMTNL2-201ENST00000338859 1919 ntTSL 1 (best) BASIC12.62□□□□□ -0.39
RAB5BP61020 ZNF821-203ENST00000446827 1822 ntTSL 1 (best) BASIC12.62□□□□□ -0.39
RAB5BP61020 PSMD8-210ENST00000620216 1538 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
RAB5BP61020 DCST2-202ENST00000368424 2392 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
RAB5BP61020 MAD1L1-203ENST00000402746 2355 ntTSL 2 BASIC12.62□□□□□ -0.39
RAB5BP61020 AC026790.1-201ENST00000399760 2941 ntTSL 2 BASIC12.61□□□□□ -0.39
RAB5BP61020 CDC45-205ENST00000437685 2072 ntTSL 2 BASIC12.61□□□□□ -0.39
RAB5BP61020 KIAA1683-201ENST00000392413 4402 ntAPPRIS ALT2 TSL 1 (best) BASIC12.61□□□□□ -0.39
RAB5BP61020 RSRP1-202ENST00000431849 1954 ntAPPRIS ALT2 TSL 1 (best) BASIC12.61□□□□□ -0.39
RAB5BP61020 FAM153A-203ENST00000440605 1966 ntAPPRIS P2 TSL 1 (best) BASIC12.61□□□□□ -0.39
RAB5BP61020 LAMB2-201ENST00000305544 5643 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
RAB5BP61020 DDX43-201ENST00000370336 2513 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
RAB5BP61020 GUCD1-206ENST00000435822 3613 ntAPPRIS ALT1 TSL 1 (best) BASIC12.61□□□□□ -0.39
RAB5BP61020 PCMTD1-201ENST00000360540 4252 ntAPPRIS P1 TSL 5 BASIC12.61□□□□□ -0.39
RAB5BP61020 CEP19-202ENST00000409690 2201 ntAPPRIS P2 TSL 1 (best) BASIC12.61□□□□□ -0.39
RAB5BP61020 CACNA1G-230ENST00000514717 6699 ntAPPRIS ALT2 TSL 1 (best) BASIC12.61□□□□□ -0.39
RAB5BP61020 GPANK1-201ENST00000375893 1598 ntAPPRIS P1 TSL 5 BASIC12.61□□□□□ -0.39
RAB5BP61020 TNS2-203ENST00000379902 4737 ntAPPRIS ALT2 TSL 1 (best) BASIC12.61□□□□□ -0.39
RAB5BP61020 EDNRA-206ENST00000511804 1569 ntTSL 2 BASIC12.61□□□□□ -0.39
RAB5BP61020 TMEM47-201ENST00000275954 4054 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
RAB5BP61020 RAPGEF4-AS1-202ENST00000435328 4625 ntTSL 1 (best) BASIC12.61□□□□□ -0.39
RAB5BP61020 COBL-205ENST00000441453 3785 ntTSL 1 (best) BASIC12.61□□□□□ -0.39
RAB5BP61020 DPP9-210ENST00000597849 2025 ntTSL 5 BASIC12.61□□□□□ -0.39
Retrieved 100 of 98,524 protein–RNA pairs in 37.4 ms