Protein–RNA interactions for Protein: P35558

PCK1, Phosphoenolpyruvate carboxykinase, cytosolic [GTP], humanhuman

Predictions only

Length 622 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCK1P35558 C15orf61-201ENST00000342683 4253 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
PCK1P35558 ATP6AP2-201ENST00000378438 2022 ntAPPRIS ALT2 TSL 5 BASIC17.04■□□□□ 0.32
PCK1P35558 SYNE3-203ENST00000554873 2826 ntTSL 5 BASIC17.04■□□□□ 0.32
PCK1P35558 ZFAND6-207ENST00000558494 1472 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
PCK1P35558 LINC01270-201ENST00000371639 2281 ntTSL 2 BASIC17.04■□□□□ 0.32
PCK1P35558 AC007728.2-201ENST00000563315 2296 ntTSL 5 BASIC17.04■□□□□ 0.32
PCK1P35558 AC067930.6-201ENST00000623257 4947 ntBASIC17.04■□□□□ 0.32
PCK1P35558 SYT12-203ENST00000525457 1678 ntAPPRIS P1 TSL 2 BASIC17.04■□□□□ 0.32
PCK1P35558 PSEN2-203ENST00000422240 1947 ntAPPRIS ALT1 TSL 2 BASIC17.04■□□□□ 0.32
PCK1P35558 SBSN-201ENST00000452271 1945 ntAPPRIS ALT2 TSL 1 (best) BASIC17.04■□□□□ 0.32
PCK1P35558 HPCAL1-207ENST00000620771 1941 ntAPPRIS P1 TSL 2 BASIC17.04■□□□□ 0.32
PCK1P35558 BEGAIN-201ENST00000355173 2674 ntTSL 1 (best) BASIC17.04■□□□□ 0.32
PCK1P35558 FBLN1-202ENST00000327858 2896 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
PCK1P35558 RUSC1-205ENST00000368354 3114 ntTSL 2 BASIC17.03■□□□□ 0.32
PCK1P35558 TPSAB1-202ENST00000461509 1357 ntAPPRIS ALT2 TSL 1 (best) BASIC17.03■□□□□ 0.32
PCK1P35558 SYT5-207ENST00000590851 3619 ntTSL 2 BASIC17.03■□□□□ 0.32
PCK1P35558 PLXNB1-202ENST00000358536 7308 ntAPPRIS P2 TSL 1 (best) BASIC17.03■□□□□ 0.32
PCK1P35558 HYAL2-208ENST00000447092 4054 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
PCK1P35558 PDGFA-203ENST00000402802 2305 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
PCK1P35558 C12orf65-201ENST00000253233 2073 ntAPPRIS P2 TSL 1 (best) BASIC17.03■□□□□ 0.32
PCK1P35558 UCKL1-201ENST00000354216 1837 ntTSL 1 (best) BASIC17.03■□□□□ 0.32
PCK1P35558 PMS2P7-201ENST00000506558 1336 ntBASIC17.03■□□□□ 0.32
PCK1P35558 ZDHHC13-201ENST00000399351 2283 ntTSL 1 (best) BASIC17.03■□□□□ 0.32
PCK1P35558 CDKN1A-203ENST00000405375 2267 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
PCK1P35558 MFSD2B-202ENST00000406420 1528 ntAPPRIS P2 TSL 5 BASIC17.03■□□□□ 0.32
PCK1P35558 ADORA1-203ENST00000367235 2219 ntTSL 2 BASIC17.03■□□□□ 0.32
PCK1P35558 MAP7-207ENST00000616617 4326 ntAPPRIS ALT2 TSL 5 BASIC17.03■□□□□ 0.32
PCK1P35558 PTGFRN-201ENST00000393203 6178 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
PCK1P35558 ZFAND5-204ENST00000376960 2686 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
PCK1P35558 AURKAIP1-201ENST00000321751 798 ntAPPRIS P1 TSL 2 BASIC17.03■□□□□ 0.32
PCK1P35558 NEK7-201ENST00000367383 586 ntTSL 2 BASIC17.03■□□□□ 0.32
PCK1P35558 MOB1B-202ENST00000396051 1107 ntTSL 2 BASIC17.03■□□□□ 0.32
PCK1P35558 AP1S3-202ENST00000396653 589 ntTSL 4 BASIC17.03■□□□□ 0.32
PCK1P35558 SMAGP-202ENST00000398453 1062 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
PCK1P35558 C22orf39-203ENST00000399568 1005 ntTSL 1 (best) BASIC17.03■□□□□ 0.32
PCK1P35558 LINC00398-201ENST00000414407 906 ntTSL 2 BASIC17.03■□□□□ 0.32
PCK1P35558 AC023274.1-201ENST00000418278 595 ntBASIC17.03■□□□□ 0.32
PCK1P35558 AC245100.5-201ENST00000452108 331 ntBASIC17.03■□□□□ 0.32
PCK1P35558 MMP24-AS1-209ENST00000456790 712 ntAPPRIS P1 TSL 2 BASIC17.03■□□□□ 0.32
PCK1P35558 NTMT1-205ENST00000459968 1123 ntTSL 2 BASIC17.03■□□□□ 0.32
PCK1P35558 AKR1A1-204ENST00000471651 1018 ntTSL 1 (best) BASIC17.03■□□□□ 0.32
PCK1P35558 C8orf46-205ENST00000480005 865 ntTSL 2 BASIC17.03■□□□□ 0.32
PCK1P35558 INO80E-210ENST00000567705 880 ntTSL 3 BASIC17.03■□□□□ 0.32
PCK1P35558 CDC14C-201ENST00000428251 1719 ntBASIC17.03■□□□□ 0.32
PCK1P35558 AC069224.1-201ENST00000566372 1715 ntBASIC17.03■□□□□ 0.32
PCK1P35558 GRIK5-204ENST00000593562 3308 ntAPPRIS P1 TSL 5 BASIC17.03■□□□□ 0.32
PCK1P35558 NOX4-215ENST00000534731 2156 ntTSL 1 (best) BASIC17.03■□□□□ 0.32
PCK1P35558 GPR89B-201ENST00000314163 1934 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
PCK1P35558 ERP29-203ENST00000546477 1698 ntTSL 3 BASIC17.03■□□□□ 0.32
PCK1P35558 CHL1-202ENST00000397491 5235 ntTSL 1 (best) BASIC17.03■□□□□ 0.32
PCK1P35558 SLC9A7-205ENST00000616978 10024 ntAPPRIS ALT2 TSL 1 (best) BASIC17.03■□□□□ 0.32
PCK1P35558 AC007326.2-201ENST00000624224 7579 ntBASIC17.03■□□□□ 0.32
PCK1P35558 RAP1GDS1-203ENST00000380158 2085 ntTSL 1 (best) BASIC17.03■□□□□ 0.32
PCK1P35558 RUNX1-202ENST00000344691 7274 ntAPPRIS ALT1 TSL 1 (best) BASIC17.03■□□□□ 0.32
PCK1P35558 BRF1-201ENST00000327359 2292 ntTSL 2 BASIC17.03■□□□□ 0.32
PCK1P35558 RBPMS-204ENST00000397323 2941 ntAPPRIS P3 TSL 1 (best) BASIC17.03■□□□□ 0.32
PCK1P35558 TM9SF1-201ENST00000261789 2452 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
PCK1P35558 PIK3CD-206ENST00000536656 5483 ntTSL 5 BASIC17.03■□□□□ 0.32
PCK1P35558 PIK3CD-208ENST00000628140 5483 ntTSL 5 BASIC17.03■□□□□ 0.32
PCK1P35558 HOXB5-201ENST00000239151 2041 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
PCK1P35558 FAHD2B-202ENST00000414820 1388 ntAPPRIS P1 TSL 5 BASIC17.02■□□□□ 0.32
PCK1P35558 BFSP2-201ENST00000302334 1558 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.32
PCK1P35558 ARHGEF5-201ENST00000056217 5544 ntAPPRIS P2 TSL 1 (best) BASIC17.02■□□□□ 0.32
PCK1P35558 LATS1-202ENST00000392273 2567 ntTSL 1 (best) BASIC17.02■□□□□ 0.32
PCK1P35558 BSG-215ENST00000618006 1329 ntTSL 2 BASIC17.02■□□□□ 0.32
PCK1P35558 MRPS22-212ENST00000495075 1547 ntAPPRIS P2 TSL 1 (best) BASIC17.02■□□□□ 0.32
PCK1P35558 TMEM222-210ENST00000608611 1511 ntAPPRIS ALT1 TSL 1 (best) BASIC17.02■□□□□ 0.32
PCK1P35558 FAM49B-224ENST00000522941 1700 ntTSL 5 BASIC17.02■□□□□ 0.32
PCK1P35558 AL445931.1-201ENST00000412181 2112 ntTSL 2 BASIC17.02■□□□□ 0.32
PCK1P35558 CDKN2AIP-203ENST00000504169 2721 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.32
PCK1P35558 PLIN1-202ENST00000430628 2900 ntAPPRIS P1 TSL 5 BASIC17.02■□□□□ 0.32
PCK1P35558 KIF26A-201ENST00000315264 6714 ntAPPRIS ALT2 TSL 1 (best) BASIC17.02■□□□□ 0.32
PCK1P35558 GSAP-201ENST00000257626 3251 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.32
PCK1P35558 SH2B1-201ENST00000322610 3095 ntTSL 2 BASIC17.02■□□□□ 0.32
PCK1P35558 LINC00884-202ENST00000448892 2680 ntTSL 5 BASIC17.02■□□□□ 0.32
PCK1P35558 RB1CC1-202ENST00000435644 6614 ntAPPRIS ALT1 TSL 1 (best) BASIC17.02■□□□□ 0.32
PCK1P35558 NARF-206ENST00000457415 1668 ntTSL 5 BASIC17.02■□□□□ 0.32
PCK1P35558 FCN2-201ENST00000291744 1057 ntAPPRIS P2 TSL 1 (best) BASIC17.02■□□□□ 0.32
PCK1P35558 SPACA4-201ENST00000321762 972 ntAPPRIS P1 BASIC17.02■□□□□ 0.32
PCK1P35558 HIST1H4J-201ENST00000355057 373 ntAPPRIS P1 BASIC17.02■□□□□ 0.32
PCK1P35558 AL355306.1-201ENST00000415580 579 ntBASIC17.02■□□□□ 0.32
PCK1P35558 MIR130B-201ENST00000498589 1093 ntTSL 5 BASIC17.02■□□□□ 0.32
PCK1P35558 FAM86C2P-203ENST00000528684 1004 ntBASIC17.02■□□□□ 0.32
PCK1P35558 IGHV3OR16-6-201ENST00000568775 360 ntBASIC17.02■□□□□ 0.32
PCK1P35558 AP000894.3-201ENST00000582554 351 ntTSL 5 BASIC17.02■□□□□ 0.32
PCK1P35558 GPR42-202ENST00000597214 1182 ntAPPRIS P1 BASIC17.02■□□□□ 0.32
PCK1P35558 HNRNPDL-206ENST00000602300 1291 ntAPPRIS ALT2 TSL 1 (best) BASIC17.02■□□□□ 0.32
PCK1P35558 AC092902.6-201ENST00000641783 218 ntBASIC17.02■□□□□ 0.32
PCK1P35558 MYO3A-206ENST00000543632 2203 ntTSL 1 (best) BASIC17.02■□□□□ 0.32
PCK1P35558 CLPTM1L-216ENST00000630539 2032 ntTSL 5 BASIC17.02■□□□□ 0.32
PCK1P35558 AQP3-201ENST00000297991 1849 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.31
PCK1P35558 LINC02228-204ENST00000642115 2962 ntBASIC17.02■□□□□ 0.31
PCK1P35558 RIMS1-216ENST00000521978 5079 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.31
PCK1P35558 DRG2-201ENST00000225729 1964 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.31
PCK1P35558 SEPT5-204ENST00000406395 1974 ntTSL 5 BASIC17.02■□□□□ 0.31
PCK1P35558 LMNB1-201ENST00000261366 2878 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.31
PCK1P35558 LINC02447-202ENST00000501888 2146 ntBASIC17.02■□□□□ 0.31
PCK1P35558 EGLN2-207ENST00000593726 2821 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.31
PCK1P35558 AASDHPPT-201ENST00000278618 2955 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
PCK1P35558 REEP3-201ENST00000373758 5205 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
Retrieved 100 of 98,524 protein–RNA pairs in 34.1 ms