Protein–RNA interactions for Protein: P18206

VCL, Vinculin, humanhuman

Predictions only

Length 1,134 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VCLP18206 EIF2B4-212ENST00000622434 1771 ntTSL 5 BASIC16.28■□□□□ 0.2
VCLP18206 IRAK1-204ENST00000393687 2049 ntTSL 1 (best) BASIC16.28■□□□□ 0.2
VCLP18206 ROBO3-201ENST00000397801 4569 ntAPPRIS P2 TSL 1 (best) BASIC16.28■□□□□ 0.2
VCLP18206 ROBO3-220ENST00000538940 4551 ntAPPRIS ALT2 TSL 5 BASIC16.28■□□□□ 0.2
VCLP18206 ATG9B-212ENST00000639579 4539 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
VCLP18206 RBM14-201ENST00000310137 2828 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
VCLP18206 CTCFL-215ENST00000608158 1984 ntTSL 1 (best) BASIC16.27■□□□□ 0.2
VCLP18206 PSEN2-211ENST00000626989 1972 ntTSL 5 BASIC16.27■□□□□ 0.2
VCLP18206 MMP25-201ENST00000336577 3554 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
VCLP18206 COMP-203ENST00000542601 2707 ntTSL 1 (best) BASIC16.27■□□□□ 0.2
VCLP18206 LOXL3-203ENST00000409249 2431 ntTSL 5 BASIC16.27■□□□□ 0.2
VCLP18206 CCDC90B-202ENST00000455220 1550 ntTSL 1 (best) BASIC16.27■□□□□ 0.2
VCLP18206 P3H1-202ENST00000296388 2585 ntAPPRIS P3 TSL 1 (best) BASIC16.27■□□□□ 0.2
VCLP18206 PCDH10-201ENST00000264360 8489 ntAPPRIS P3 TSL 1 (best) BASIC16.27■□□□□ 0.2
VCLP18206 FCN1-201ENST00000371806 1286 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
VCLP18206 HSD17B8-203ENST00000374662 990 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
VCLP18206 PRUNE2-202ENST00000376713 1069 ntTSL 5 BASIC16.27■□□□□ 0.2
VCLP18206 AC004461.1-201ENST00000412461 403 ntBASIC16.27■□□□□ 0.2
VCLP18206 AL122058.1-202ENST00000426580 252 ntTSL 3 BASIC16.27■□□□□ 0.2
VCLP18206 AL109741.1-201ENST00000432195 403 ntTSL 2 BASIC16.27■□□□□ 0.2
VCLP18206 RIMS4-202ENST00000541604 1036 ntAPPRIS ALT1 TSL 1 (best) BASIC16.27■□□□□ 0.2
VCLP18206 TSFM-210ENST00000550559 897 ntTSL 5 BASIC16.27■□□□□ 0.2
VCLP18206 AP000275.2-202ENST00000553001 929 ntTSL 5 BASIC16.27■□□□□ 0.2
VCLP18206 RNF34-208ENST00000555076 593 ntTSL 3 BASIC16.27■□□□□ 0.2
VCLP18206 AC103808.2-201ENST00000582755 594 ntTSL 4 BASIC16.27■□□□□ 0.2
VCLP18206 AL022328.4-201ENST00000608025 1001 ntTSL 2 BASIC16.27■□□□□ 0.2
VCLP18206 AC008267.7-201ENST00000624570 1194 ntBASIC16.27■□□□□ 0.2
VCLP18206 GOLGA2P2Y-202ENST00000423852 1506 ntBASIC16.27■□□□□ 0.2
VCLP18206 CCDC28A-202ENST00000611852 1505 ntTSL 1 (best) BASIC16.27■□□□□ 0.2
VCLP18206 TERF1-201ENST00000276602 3268 ntAPPRIS ALT2 TSL 1 (best) BASIC16.27■□□□□ 0.2
VCLP18206 ASIC1-202ENST00000447966 3778 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
VCLP18206 ZFP1-209ENST00000570010 1457 ntAPPRIS P1 TSL 2 BASIC16.27■□□□□ 0.19
VCLP18206 TRIM24-202ENST00000415680 3799 ntAPPRIS ALT2 TSL 1 (best) BASIC16.27■□□□□ 0.19
VCLP18206 CELF4-202ENST00000361795 1853 ntAPPRIS ALT1 TSL 2 BASIC16.27■□□□□ 0.19
VCLP18206 ACTL8-201ENST00000375406 1861 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.19
VCLP18206 ARMC6-203ENST00000392336 1866 ntTSL 2 BASIC16.27■□□□□ 0.19
VCLP18206 ALMS1P1-202ENST00000450720 1601 ntTSL 1 (best) BASIC16.27■□□□□ 0.19
VCLP18206 AMT-233ENST00000636522 1620 ntTSL 2 BASIC16.27■□□□□ 0.19
VCLP18206 IQCC-202ENST00000537469 2252 ntAPPRIS ALT2 TSL 1 (best) BASIC16.26■□□□□ 0.19
VCLP18206 ZFP41-201ENST00000330701 4797 ntAPPRIS P1 TSL 2 BASIC16.26■□□□□ 0.19
VCLP18206 SLC26A1-202ENST00000398516 3109 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
VCLP18206 MUL1-201ENST00000264198 2438 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
VCLP18206 SLC39A1-201ENST00000310483 2427 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
VCLP18206 MGEA5-201ENST00000357797 3263 ntTSL 1 (best) BASIC16.26■□□□□ 0.19
VCLP18206 NQO2-201ENST00000338130 1515 ntAPPRIS P1 TSL 2 BASIC16.26■□□□□ 0.19
VCLP18206 SLC25A35-205ENST00000580340 1541 ntTSL 1 (best) BASIC16.26■□□□□ 0.19
VCLP18206 ASNS-201ENST00000175506 2356 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
VCLP18206 TSC22D4-201ENST00000300181 2383 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
VCLP18206 LRRC57-202ENST00000397130 2384 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
VCLP18206 GPS1-202ENST00000320548 1949 ntTSL 2 BASIC16.26■□□□□ 0.19
VCLP18206 ULK4-203ENST00000420927 1904 ntTSL 1 (best) BASIC16.26■□□□□ 0.19
VCLP18206 DMTN-202ENST00000358242 2772 ntTSL 5 BASIC16.26■□□□□ 0.19
VCLP18206 KIFC3-205ENST00000540079 2781 ntTSL 2 BASIC16.26■□□□□ 0.19
VCLP18206 NTRK3-203ENST00000357724 2980 ntTSL 5 BASIC16.26■□□□□ 0.19
VCLP18206 GSTO1-202ENST00000369713 972 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
VCLP18206 PRORY-201ENST00000382764 878 ntAPPRIS P1 TSL 5 BASIC16.26■□□□□ 0.19
VCLP18206 HHATL-AS1-201ENST00000423165 557 ntTSL 4 BASIC16.26■□□□□ 0.19
VCLP18206 AL162431.1-201ENST00000434447 543 ntTSL 3 BASIC16.26■□□□□ 0.19
VCLP18206 PTGES3-204ENST00000448157 1017 ntTSL 2 BASIC16.26■□□□□ 0.19
VCLP18206 AC005020.2-201ENST00000455905 830 ntAPPRIS P1 TSL 3 BASIC16.26■□□□□ 0.19
VCLP18206 AC090515.4-201ENST00000558042 450 ntTSL 3 BASIC16.26■□□□□ 0.19
VCLP18206 AC243562.1-201ENST00000560672 389 ntBASIC16.26■□□□□ 0.19
VCLP18206 QPRT-203ENST00000562473 579 ntTSL 3 BASIC16.26■□□□□ 0.19
VCLP18206 AC009053.3-201ENST00000567148 574 ntTSL 4 BASIC16.26■□□□□ 0.19
VCLP18206 KRT16P2-202ENST00000579062 563 ntTSL 4 BASIC16.26■□□□□ 0.19
VCLP18206 IL11-202ENST00000585513 1201 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
VCLP18206 BCL2L12-206ENST00000598306 510 ntTSL 5 BASIC16.26■□□□□ 0.19
VCLP18206 CU104787.1-201ENST00000624155 288 ntTSL 1 (best) BASIC16.26■□□□□ 0.19
VCLP18206 ZNF418-208ENST00000599852 2501 ntTSL 2 BASIC16.26■□□□□ 0.19
VCLP18206 NOMO2-203ENST00000543392 3765 ntAPPRIS ALT2 TSL 1 (best) BASIC16.26■□□□□ 0.19
VCLP18206 PCGF3-213ENST00000620529 1899 ntBASIC16.26■□□□□ 0.19
VCLP18206 CDIP1-209ENST00000567695 2062 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
VCLP18206 KCNK9-203ENST00000520439 1441 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
VCLP18206 CUX1-213ENST00000549414 4452 ntAPPRIS ALT2 TSL 5 BASIC16.26■□□□□ 0.19
VCLP18206 MARCO-201ENST00000327097 1838 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
VCLP18206 WBP2-215ENST00000591399 2225 ntAPPRIS P2 TSL 5 BASIC16.26■□□□□ 0.19
VCLP18206 PABPC4-201ENST00000372856 3016 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
VCLP18206 TNKS1BP1-201ENST00000358252 5795 ntAPPRIS P2 TSL 1 (best) BASIC16.26■□□□□ 0.19
VCLP18206 CA10-203ENST00000451037 3189 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
VCLP18206 SLC25A27-201ENST00000371347 2963 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
VCLP18206 SSH3-203ENST00000376757 2990 ntTSL 2 BASIC16.26■□□□□ 0.19
VCLP18206 LMF2-202ENST00000474879 2582 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
VCLP18206 SLC29A2-207ENST00000619145 2380 ntTSL 5 BASIC16.26■□□□□ 0.19
VCLP18206 Z99756.1-201ENST00000458463 1951 ntTSL 1 (best) BASIC16.26■□□□□ 0.19
VCLP18206 CDK18-201ENST00000360066 3141 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
VCLP18206 CMTM3-202ENST00000424011 2330 ntAPPRIS P1 TSL 2 BASIC16.25■□□□□ 0.19
VCLP18206 FRMD5-202ENST00000417257 5011 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
VCLP18206 LGMN-211ENST00000555699 1728 ntTSL 5 BASIC16.25■□□□□ 0.19
VCLP18206 TSC2-202ENST00000350773 5532 ntAPPRIS ALT2 TSL 1 (best) BASIC16.25■□□□□ 0.19
VCLP18206 EPS15L1-207ENST00000594975 2489 ntTSL 2 BASIC16.25■□□□□ 0.19
VCLP18206 EWSR1-201ENST00000331029 2267 ntTSL 5 BASIC16.25■□□□□ 0.19
VCLP18206 PRRG3-205ENST00000538575 1303 ntAPPRIS P1 TSL 5 BASIC16.25■□□□□ 0.19
VCLP18206 ARL8B-201ENST00000256496 3005 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
VCLP18206 C12orf40-202ENST00000405531 1656 ntAPPRIS ALT2 TSL 1 (best) BASIC16.25■□□□□ 0.19
VCLP18206 NFIX-210ENST00000588228 1692 ntTSL 2 BASIC16.25■□□□□ 0.19
VCLP18206 TBRG4-203ENST00000395655 2225 ntTSL 2 BASIC16.25■□□□□ 0.19
VCLP18206 AP2A2-222ENST00000534328 1491 ntTSL 5 BASIC16.25■□□□□ 0.19
VCLP18206 DIABLO-208ENST00000464942 2569 ntTSL 1 (best) BASIC16.25■□□□□ 0.19
VCLP18206 EYA2-208ENST00000497062 2384 ntTSL 1 (best) BASIC16.25■□□□□ 0.19
VCLP18206 GFRA2-208ENST00000524240 4921 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
Retrieved 100 of 98,524 protein–RNA pairs in 46.3 ms