Protein–RNA interactions for Protein: P05060

CHGB, Secretogranin-1, humanhuman

Predictions only

Length 677 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CHGBP05060 PSMD9-201ENST00000261817 2307 ntAPPRIS ALT1 TSL 2 BASIC19.28■□□□□ 0.68
CHGBP05060 AC007950.2-201ENST00000615045 2347 ntBASIC19.28■□□□□ 0.68
CHGBP05060 PHF20L1-209ENST00000395386 6237 ntAPPRIS P1 TSL 5 BASIC19.28■□□□□ 0.68
CHGBP05060 PARVB-204ENST00000406477 1569 ntTSL 1 (best) BASIC19.27■□□□□ 0.68
CHGBP05060 AC022144.1-201ENST00000602255 1580 ntBASIC19.27■□□□□ 0.68
CHGBP05060 RANBP10-201ENST00000317506 5341 ntAPPRIS P2 TSL 1 (best) BASIC19.27■□□□□ 0.68
CHGBP05060 RANBP10-209ENST00000630626 5305 ntAPPRIS ALT2 TSL 5 BASIC19.27■□□□□ 0.68
CHGBP05060 ARHGAP5-205ENST00000433497 3047 ntTSL 1 (best) BASIC19.27■□□□□ 0.68
CHGBP05060 DEPDC7-202ENST00000311388 2012 ntTSL 1 (best) BASIC19.27■□□□□ 0.68
CHGBP05060 SBNO2-204ENST00000587024 4861 ntAPPRIS ALT2 TSL 2 BASIC19.27■□□□□ 0.68
CHGBP05060 KRT35-201ENST00000246639 1778 ntTSL 1 (best) BASIC19.27■□□□□ 0.68
CHGBP05060 ASAH1-240ENST00000636997 1774 ntTSL 5 BASIC19.27■□□□□ 0.68
CHGBP05060 ESR2-209ENST00000555278 1883 ntTSL 1 (best) BASIC19.27■□□□□ 0.68
CHGBP05060 LINC00266-1-201ENST00000279067 928 ntTSL 1 (best) BASIC19.27■□□□□ 0.68
CHGBP05060 CALY-203ENST00000368558 825 ntTSL 5 BASIC19.27■□□□□ 0.68
CHGBP05060 VMA21-202ENST00000370361 693 ntTSL 5 BASIC19.27■□□□□ 0.68
CHGBP05060 FBXO4-206ENST00000509134 1284 ntTSL 5 BASIC19.27■□□□□ 0.68
CHGBP05060 SERBP1P5-201ENST00000510079 1181 ntBASIC19.27■□□□□ 0.68
CHGBP05060 AC100810.1-201ENST00000518822 978 ntTSL 2 BASIC19.27■□□□□ 0.68
CHGBP05060 RAB35-202ENST00000534951 939 ntTSL 2 BASIC19.27■□□□□ 0.68
CHGBP05060 AC243562.2-201ENST00000561247 970 ntBASIC19.27■□□□□ 0.68
CHGBP05060 TAF4B-201ENST00000269142 5260 ntAPPRIS P3 TSL 1 (best) BASIC19.27■□□□□ 0.68
CHGBP05060 SCARB1-202ENST00000339570 3329 ntTSL 5 BASIC19.27■□□□□ 0.68
CHGBP05060 DUSP26-203ENST00000523956 1373 ntAPPRIS P1 TSL 5 BASIC19.27■□□□□ 0.68
CHGBP05060 KCNMA1-278ENST00000640141 5705 ntAPPRIS ALT2 TSL 5 BASIC19.27■□□□□ 0.68
CHGBP05060 SPATA20-202ENST00000356488 2634 ntTSL 1 (best) BASIC19.27■□□□□ 0.68
CHGBP05060 EPN1-203ENST00000411543 2621 ntTSL 1 (best) BASIC19.27■□□□□ 0.68
CHGBP05060 CCDC136-212ENST00000487361 2268 ntAPPRIS ALT2 TSL 5 BASIC19.27■□□□□ 0.68
CHGBP05060 ACSL1-202ENST00000454703 3636 ntTSL 5 BASIC19.27■□□□□ 0.67
CHGBP05060 SALL4-203ENST00000395997 1918 ntTSL 1 (best) BASIC19.27■□□□□ 0.67
CHGBP05060 SMARCA4-215ENST00000590574 5282 ntAPPRIS ALT1 TSL 5 BASIC19.27■□□□□ 0.67
CHGBP05060 BATF2-201ENST00000301887 2142 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.67
CHGBP05060 APLN-201ENST00000429967 3205 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.67
CHGBP05060 SREBF2-201ENST00000361204 5240 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.67
CHGBP05060 NFIC-202ENST00000395111 1755 ntTSL 2 BASIC19.27■□□□□ 0.67
CHGBP05060 TPD52L2-204ENST00000351424 2302 ntAPPRIS P4 TSL 2 BASIC19.26■□□□□ 0.67
CHGBP05060 PDGFA-201ENST00000354513 1308 ntTSL 1 (best) BASIC19.26■□□□□ 0.67
CHGBP05060 HNRNPH3-202ENST00000354695 1332 ntAPPRIS ALT1 TSL 1 (best) BASIC19.26■□□□□ 0.67
CHGBP05060 ATP6AP2-233ENST00000638153 1303 ntAPPRIS ALT2 TSL 5 BASIC19.26■□□□□ 0.67
CHGBP05060 VSX2-201ENST00000261980 2995 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
CHGBP05060 CERNA1-202ENST00000560518 1972 ntTSL 2 BASIC19.26■□□□□ 0.67
CHGBP05060 RASA4-204ENST00000462172 2634 ntTSL 1 (best) BASIC19.26■□□□□ 0.67
CHGBP05060 TMEM222-210ENST00000608611 1511 ntAPPRIS ALT1 TSL 1 (best) BASIC19.26■□□□□ 0.67
CHGBP05060 FAM215B-201ENST00000458392 2183 ntTSL 1 (best) BASIC19.26■□□□□ 0.67
CHGBP05060 ATP2C1-224ENST00000533801 3690 ntTSL 1 (best) BASIC19.26■□□□□ 0.67
CHGBP05060 PIK3IP1-203ENST00000441972 2374 ntTSL 2 BASIC19.26■□□□□ 0.67
CHGBP05060 SERTM1-201ENST00000315190 3207 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
CHGBP05060 LMF2-202ENST00000474879 2582 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
CHGBP05060 STK10-201ENST00000176763 6060 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
CHGBP05060 FAM104A-202ENST00000405159 2865 ntTSL 1 (best) BASIC19.26■□□□□ 0.67
CHGBP05060 GMNN-201ENST00000230056 1262 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
CHGBP05060 C2orf40-201ENST00000238044 789 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
CHGBP05060 LCE5A-201ENST00000334269 819 ntAPPRIS P1 TSL 3 BASIC19.26■□□□□ 0.67
CHGBP05060 KRT18P64-201ENST00000434946 1219 ntBASIC19.26■□□□□ 0.67
CHGBP05060 TEX48-201ENST00000436752 708 ntAPPRIS P1 TSL 5 BASIC19.26■□□□□ 0.67
CHGBP05060 TSPY16P-201ENST00000449843 468 ntBASIC19.26■□□□□ 0.67
CHGBP05060 AC106795.3-201ENST00000511650 547 ntTSL 4 BASIC19.26■□□□□ 0.67
CHGBP05060 TMEM258-204ENST00000537328 575 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
CHGBP05060 AC025048.3-201ENST00000590609 569 ntBASIC19.26■□□□□ 0.67
CHGBP05060 AC011467.4-201ENST00000594891 528 ntBASIC19.26■□□□□ 0.67
CHGBP05060 MRNIP-225ENST00000610475 810 ntTSL 5 BASIC19.26■□□□□ 0.67
CHGBP05060 TEX48-202ENST00000612244 662 ntTSL 3 BASIC19.26■□□□□ 0.67
CHGBP05060 AC005702.4-201ENST00000618393 416 ntBASIC19.26■□□□□ 0.67
CHGBP05060 VPS16-203ENST00000380469 2318 ntTSL 2 BASIC19.26■□□□□ 0.67
CHGBP05060 GIT2-220ENST00000553118 2424 ntTSL 5 BASIC19.26■□□□□ 0.67
CHGBP05060 CNGA3-205ENST00000436404 2504 ntAPPRIS ALT2 TSL 1 (best) BASIC19.26■□□□□ 0.67
CHGBP05060 MPP5-201ENST00000261681 5552 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
CHGBP05060 NFIC-201ENST00000341919 1573 ntTSL 1 (best) BASIC19.26■□□□□ 0.67
CHGBP05060 VILL-207ENST00000465644 1857 ntTSL 5 BASIC19.26■□□□□ 0.67
CHGBP05060 ST3GAL6-214ENST00000483910 1886 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
CHGBP05060 BECN1-213ENST00000590099 2087 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
CHGBP05060 SCNN1A-221ENST00000543768 2361 ntAPPRIS ALT2 TSL 2 BASIC19.26■□□□□ 0.67
CHGBP05060 FGFR3-204ENST00000412135 3951 ntTSL 5 BASIC19.25■□□□□ 0.67
CHGBP05060 ZDHHC11B-204ENST00000622126 1301 ntTSL 5 BASIC19.25■□□□□ 0.67
CHGBP05060 AC002310.1-201ENST00000457283 1445 ntTSL 2 BASIC19.25■□□□□ 0.67
CHGBP05060 IL11RA-202ENST00000441545 1700 ntAPPRIS P1 TSL 5 BASIC19.25■□□□□ 0.67
CHGBP05060 ACE-203ENST00000413513 2237 ntTSL 2 BASIC19.25■□□□□ 0.67
CHGBP05060 GLIS1-201ENST00000312233 2812 ntAPPRIS P2 TSL 2 BASIC19.25■□□□□ 0.67
CHGBP05060 CD8A-201ENST00000283635 2873 ntAPPRIS P4 TSL 1 (best) BASIC19.25■□□□□ 0.67
CHGBP05060 FOXP3-202ENST00000376199 2274 ntTSL 2 BASIC19.25■□□□□ 0.67
CHGBP05060 GAREM2-202ENST00000407684 5138 ntTSL 2 BASIC19.25■□□□□ 0.67
CHGBP05060 AP001282.1-201ENST00000531301 1499 ntBASIC19.25■□□□□ 0.67
CHGBP05060 PRKAR2A-201ENST00000265563 6471 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
CHGBP05060 RPS5-201ENST00000196551 740 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
CHGBP05060 TMEM41A-201ENST00000296254 1060 ntTSL 2 BASIC19.25■□□□□ 0.67
CHGBP05060 SBSPON-201ENST00000297354 3801 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
CHGBP05060 PRSS55-201ENST00000328655 1124 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
CHGBP05060 CRYGN-201ENST00000337323 754 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
CHGBP05060 XAGE1A-203ENST00000375602 614 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
CHGBP05060 XAGE1B-203ENST00000375616 614 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
CHGBP05060 FAM8A3P-201ENST00000427218 844 ntBASIC19.25■□□□□ 0.67
CHGBP05060 GNAQP1-201ENST00000444815 1067 ntBASIC19.25■□□□□ 0.67
CHGBP05060 LINC01336-202ENST00000506086 479 ntTSL 5 BASIC19.25■□□□□ 0.67
CHGBP05060 NDUFAF2-203ENST00000511107 586 ntTSL 1 (best) BASIC19.25■□□□□ 0.67
CHGBP05060 RPL10P19-202ENST00000520582 722 ntTSL 3 BASIC19.25■□□□□ 0.67
CHGBP05060 HNRNPUP1-201ENST00000554987 333 ntBASIC19.25■□□□□ 0.67
CHGBP05060 MIR4745-201ENST00000577608 62 ntBASIC19.25■□□□□ 0.67
CHGBP05060 KLK15-203ENST00000596931 692 ntTSL 1 (best) BASIC19.25■□□□□ 0.67
CHGBP05060 KLK15-204ENST00000598239 855 ntAPPRIS P3 TSL 1 (best) BASIC19.25■□□□□ 0.67
CHGBP05060 AC097359.3-201ENST00000603982 1210 ntBASIC19.25■□□□□ 0.67
Retrieved 100 of 98,524 protein–RNA pairs in 22.7 ms