Protein–RNA interactions for Protein: O60547

GMDS, GDP-mannose 4,6 dehydratase, humanhuman

Predictions only

Length 372 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
GMDSO60547 CLEC18A-203ENST00000449317 1875 ntAPPRIS ALT2 TSL 5 BASIC14.34□□□□□ -0.11
GMDSO60547 DNM1P51-202ENST00000558801 8752 ntTSL 5 BASIC14.34□□□□□ -0.11
GMDSO60547 PRR15-201ENST00000319694 1678 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
GMDSO60547 WDR53-201ENST00000332629 1679 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
GMDSO60547 CLN3-203ENST00000357806 1469 ntTSL 1 (best) BASIC14.34□□□□□ -0.11
GMDSO60547 CYP51A1P2-201ENST00000419457 1499 ntBASIC14.34□□□□□ -0.11
GMDSO60547 SH2B1-206ENST00000545570 1488 ntTSL 2 BASIC14.34□□□□□ -0.11
GMDSO60547 ZFAND6-207ENST00000558494 1472 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
GMDSO60547 POP4-201ENST00000221770 2321 ntTSL 1 (best) BASIC14.34□□□□□ -0.11
GMDSO60547 TMEM44-201ENST00000330115 1278 ntTSL 1 (best) BASIC14.34□□□□□ -0.11
GMDSO60547 ADIPOR1-202ENST00000367254 1116 ntTSL 1 (best) BASIC14.34□□□□□ -0.11
GMDSO60547 SLC2A8-201ENST00000373352 914 ntTSL 2 BASIC14.34□□□□□ -0.11
GMDSO60547 TMEM128-202ENST00000382753 1221 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
GMDSO60547 AL049612.1-201ENST00000427017 694 ntTSL 5 BASIC14.34□□□□□ -0.11
GMDSO60547 AC007834.1-201ENST00000446473 728 ntTSL 3 BASIC14.34□□□□□ -0.11
GMDSO60547 NTMT1-207ENST00000482347 1072 ntTSL 2 BASIC14.34□□□□□ -0.11
GMDSO60547 AC034213.1-201ENST00000507681 806 ntTSL 3 BASIC14.34□□□□□ -0.11
GMDSO60547 CCNG1-208ENST00000510664 994 ntTSL 5 BASIC14.34□□□□□ -0.11
GMDSO60547 MRNIP-205ENST00000518235 1244 ntAPPRIS ALT2 TSL 2 BASIC14.34□□□□□ -0.11
GMDSO60547 SEC23A-206ENST00000553970 574 ntTSL 4 BASIC14.34□□□□□ -0.11
GMDSO60547 AL049869.3-201ENST00000554918 558 ntTSL 3 BASIC14.34□□□□□ -0.11
GMDSO60547 HEXA-210ENST00000567213 1000 ntTSL 3 BASIC14.34□□□□□ -0.11
GMDSO60547 AC084125.4-201ENST00000580385 338 ntTSL 3 BASIC14.34□□□□□ -0.11
GMDSO60547 CYB561-216ENST00000582297 897 ntTSL 3 BASIC14.34□□□□□ -0.11
GMDSO60547 DMPK-202ENST00000343373 3227 ntTSL 1 (best) BASIC14.34□□□□□ -0.11
GMDSO60547 SMARCA4-201ENST00000344626 5392 ntTSL 1 (best) BASIC14.34□□□□□ -0.11
GMDSO60547 AC009237.3-202ENST00000608013 3042 ntTSL 1 (best) BASIC14.34□□□□□ -0.11
GMDSO60547 CASC3-201ENST00000264645 4116 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
GMDSO60547 RHOC-201ENST00000285735 2199 ntAPPRIS P1 TSL 2 BASIC14.34□□□□□ -0.11
GMDSO60547 STXBP5-207ENST00000546097 2160 ntTSL 1 (best) BASIC14.34□□□□□ -0.11
GMDSO60547 HLA-B-249ENST00000412585 1547 ntAPPRIS P1 BASIC14.34□□□□□ -0.11
GMDSO60547 SYNM-201ENST00000328642 3960 ntAPPRIS ALT2 TSL 1 (best) BASIC14.34□□□□□ -0.11
GMDSO60547 CCAR2-202ENST00000389279 3980 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
GMDSO60547 ZNF561-AS1-204ENST00000587536 1799 ntTSL 2 BASIC14.34□□□□□ -0.11
GMDSO60547 ACSL3-202ENST00000392066 3147 ntAPPRIS P1 TSL 5 BASIC14.34□□□□□ -0.11
GMDSO60547 TRIM14-201ENST00000341469 4454 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
GMDSO60547 CDS2-203ENST00000460006 9298 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
GMDSO60547 ICMT-201ENST00000343813 4771 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
GMDSO60547 SLC25A34-201ENST00000294454 2986 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
GMDSO60547 ZNF259P1-201ENST00000407656 1365 ntBASIC14.34□□□□□ -0.11
GMDSO60547 SRSF2-205ENST00000508921 1390 ntTSL 2 BASIC14.34□□□□□ -0.11
GMDSO60547 URAHP-203ENST00000517889 1381 ntTSL 1 (best) BASIC14.34□□□□□ -0.11
GMDSO60547 KCNG3-202ENST00000394973 3656 ntAPPRIS ALT1 TSL 1 (best) BASIC14.34□□□□□ -0.11
GMDSO60547 IQCE-204ENST00000404984 2086 ntAPPRIS ALT2 TSL 5 BASIC14.34□□□□□ -0.11
GMDSO60547 LEF1-202ENST00000379951 3477 ntTSL 1 (best) BASIC14.34□□□□□ -0.11
GMDSO60547 CHDH-201ENST00000315251 7665 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.11
GMDSO60547 GNS-201ENST00000258145 5122 ntAPPRIS P2 TSL 1 (best) BASIC14.33□□□□□ -0.11
GMDSO60547 SCP2-201ENST00000371509 1889 ntTSL 1 (best) BASIC14.33□□□□□ -0.11
GMDSO60547 ARMC6-203ENST00000392336 1866 ntTSL 2 BASIC14.33□□□□□ -0.11
GMDSO60547 PRKD2-201ENST00000291281 3070 ntAPPRIS P3 TSL 1 (best) BASIC14.33□□□□□ -0.11
GMDSO60547 HOXA5-201ENST00000222726 1657 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.11
GMDSO60547 MFGE8-215ENST00000566497 1689 ntAPPRIS P1 TSL 5 BASIC14.33□□□□□ -0.11
GMDSO60547 ACP5-212ENST00000592828 1699 ntAPPRIS P1 TSL 5 BASIC14.33□□□□□ -0.11
GMDSO60547 LRRC47-201ENST00000378251 4310 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.11
GMDSO60547 CHRFAM7A-203ENST00000401522 1913 ntTSL 1 (best) BASIC14.33□□□□□ -0.11
GMDSO60547 CCDC50-201ENST00000392455 8429 ntAPPRIS ALT1 TSL 1 (best) BASIC14.33□□□□□ -0.11
GMDSO60547 GOLGA8DP-202ENST00000341390 2184 ntBASIC14.33□□□□□ -0.11
GMDSO60547 SPHK2-210ENST00000599748 2683 ntAPPRIS ALT2 TSL 1 (best) BASIC14.33□□□□□ -0.12
GMDSO60547 BCAR3-201ENST00000260502 3171 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
GMDSO60547 CLPTM1L-209ENST00000507807 1740 ntTSL 1 (best) BASIC14.33□□□□□ -0.12
GMDSO60547 MANSC1-201ENST00000396349 2220 ntTSL 2 BASIC14.33□□□□□ -0.12
GMDSO60547 NUP58-201ENST00000381718 2489 ntAPPRIS ALT1 TSL 2 BASIC14.33□□□□□ -0.12
GMDSO60547 TC2N-201ENST00000340892 4708 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
GMDSO60547 SHROOM4-201ENST00000289292 6261 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
GMDSO60547 DDB1-201ENST00000301764 4506 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
GMDSO60547 TBC1D2-201ENST00000342112 3046 ntTSL 2 BASIC14.33□□□□□ -0.12
GMDSO60547 MED16-207ENST00000589119 2772 ntAPPRIS P2 TSL 1 (best) BASIC14.33□□□□□ -0.12
GMDSO60547 CNKSR1-202ENST00000374253 2538 ntAPPRIS ALT2 TSL 1 (best) BASIC14.33□□□□□ -0.12
GMDSO60547 ISCA2-201ENST00000298818 851 ntTSL 5 BASIC14.33□□□□□ -0.12
GMDSO60547 MUC1-204ENST00000343256 648 ntTSL 1 (best) BASIC14.33□□□□□ -0.12
GMDSO60547 CD99-204ENST00000381187 892 ntAPPRIS ALT2 TSL 2 BASIC14.33□□□□□ -0.12
GMDSO60547 AP1S3-203ENST00000396654 830 ntAPPRIS P2 TSL 2 BASIC14.33□□□□□ -0.12
GMDSO60547 THAP7-202ENST00000399133 1144 ntAPPRIS P1 TSL 2 BASIC14.33□□□□□ -0.12
GMDSO60547 CLDN14-205ENST00000399139 1231 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
GMDSO60547 PLA2G16-203ENST00000415826 1099 ntAPPRIS P1 TSL 2 BASIC14.33□□□□□ -0.12
GMDSO60547 STARD13-205ENST00000439831 945 ntTSL 2 BASIC14.33□□□□□ -0.12
GMDSO60547 MIR503HG-203ENST00000441492 649 ntTSL 1 (best) BASIC14.33□□□□□ -0.12
GMDSO60547 HYAL1-206ENST00000447605 666 ntTSL 1 (best) BASIC14.33□□□□□ -0.12
GMDSO60547 AL391069.2-202ENST00000447795 622 ntTSL 1 (best) BASIC14.33□□□□□ -0.12
GMDSO60547 SLC26A4-AS1-202ENST00000449741 586 ntTSL 4 BASIC14.33□□□□□ -0.12
GMDSO60547 RNASET2-206ENST00000476238 887 ntAPPRIS P1 TSL 5 BASIC14.33□□□□□ -0.12
GMDSO60547 C1QB-203ENST00000509305 1254 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
GMDSO60547 MRPL49-203ENST00000526171 501 ntTSL 2 BASIC14.33□□□□□ -0.12
GMDSO60547 FAM181A-205ENST00000557719 1072 ntAPPRIS P1 TSL 2 BASIC14.33□□□□□ -0.12
GMDSO60547 AC092384.3-201ENST00000561980 531 ntTSL 4 BASIC14.33□□□□□ -0.12
GMDSO60547 MIF4GD-205ENST00000578305 569 ntTSL 5 BASIC14.33□□□□□ -0.12
GMDSO60547 AC055811.1-201ENST00000584203 1231 ntTSL 5 BASIC14.33□□□□□ -0.12
GMDSO60547 IFT20-215ENST00000585313 852 ntAPPRIS P4 TSL 3 BASIC14.33□□□□□ -0.12
GMDSO60547 BABAM1-206ENST00000595632 966 ntAPPRIS ALT2 TSL 5 BASIC14.33□□□□□ -0.12
GMDSO60547 SELENOM-210ENST00000611680 689 ntAPPRIS ALT2 TSL 5 BASIC14.33□□□□□ -0.12
GMDSO60547 CCL3-204ENST00000613922 778 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
GMDSO60547 HMGN3-203ENST00000620514 1010 ntTSL 3 BASIC14.33□□□□□ -0.12
GMDSO60547 ACY1-212ENST00000635797 1294 ntTSL 5 BASIC14.33□□□□□ -0.12
GMDSO60547 PLA2G16-206ENST00000639271 957 ntTSL 5 BASIC14.33□□□□□ -0.12
GMDSO60547 GNAO1-201ENST00000262493 3337 ntAPPRIS P5 TSL 1 (best) BASIC14.33□□□□□ -0.12
GMDSO60547 WDR20-202ENST00000322340 3060 ntTSL 1 (best) BASIC14.33□□□□□ -0.12
GMDSO60547 KIAA1211-206ENST00000541073 4117 ntAPPRIS ALT2 TSL 1 (best) BASIC14.33□□□□□ -0.12
GMDSO60547 PARD6G-201ENST00000353265 3868 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
GMDSO60547 PKD2L2-205ENST00000508638 2333 ntTSL 1 (best) BASIC14.33□□□□□ -0.12
GMDSO60547 DMAP1-201ENST00000315913 1552 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
Retrieved 100 of 98,524 protein–RNA pairs in 77.4 ms