Protein–RNA interactions for Protein: O43316

PAX4, Paired box protein Pax-4, humanhuman

Predictions only

Length 350 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PAX4O43316 TXNDC11-201ENST00000283033 3140 ntAPPRIS P3 TSL 2 BASIC11.59□□□□□ -0.55
PAX4O43316 KIF3C-201ENST00000264712 5344 ntAPPRIS P1 TSL 1 (best) BASIC11.59□□□□□ -0.55
PAX4O43316 POTEE-204ENST00000613282 1926 ntTSL 5 BASIC11.59□□□□□ -0.55
PAX4O43316 POTEI-202ENST00000615053 1926 ntTSL 5 BASIC11.59□□□□□ -0.55
PAX4O43316 ITGB8-201ENST00000222573 8751 ntAPPRIS P1 TSL 1 (best) BASIC11.59□□□□□ -0.55
PAX4O43316 GDF5-201ENST00000374369 2383 ntAPPRIS P1 TSL 1 (best) BASIC11.59□□□□□ -0.55
PAX4O43316 COTL1-201ENST00000262428 1843 ntAPPRIS P1 TSL 1 (best) BASIC11.59□□□□□ -0.55
PAX4O43316 CD1E-213ENST00000444681 1820 ntAPPRIS ALT2 TSL 1 (best) BASIC11.59□□□□□ -0.55
PAX4O43316 MAGEA2-201ENST00000595583 1830 ntAPPRIS P1 TSL 1 (best) BASIC11.59□□□□□ -0.55
PAX4O43316 ELK1-202ENST00000343894 736 ntAPPRIS ALT2 TSL 1 (best) BASIC11.59□□□□□ -0.55
PAX4O43316 IFNA2-201ENST00000380206 1135 ntAPPRIS P1 BASIC11.59□□□□□ -0.55
PAX4O43316 EXOSC8-202ENST00000389704 1198 ntAPPRIS P1 TSL 1 (best) BASIC11.59□□□□□ -0.55
PAX4O43316 YBX2P1-201ENST00000394192 760 ntBASIC11.59□□□□□ -0.55
PAX4O43316 PRR29-203ENST00000425164 1266 ntTSL 2 BASIC11.59□□□□□ -0.55
PAX4O43316 AL671277.1-201ENST00000429656 993 ntBASIC11.59□□□□□ -0.55
PAX4O43316 PLXNB2-207ENST00000449103 6383 ntAPPRIS P1 TSL 5 BASIC11.59□□□□□ -0.55
PAX4O43316 AL390729.1-201ENST00000456651 587 ntTSL 2 BASIC11.59□□□□□ -0.55
PAX4O43316 HELT-204ENST00000515777 841 ntAPPRIS P4 TSL 1 (best) BASIC11.59□□□□□ -0.55
PAX4O43316 PGAM5P1-201ENST00000518923 814 ntBASIC11.59□□□□□ -0.55
PAX4O43316 AC087276.3-201ENST00000526220 787 ntTSL 3 BASIC11.59□□□□□ -0.55
PAX4O43316 IGLL5-201ENST00000526893 1050 ntAPPRIS P2 TSL 1 (best) BASIC11.59□□□□□ -0.55
PAX4O43316 IGLL5-202ENST00000531372 882 ntTSL 1 (best) BASIC11.59□□□□□ -0.55
PAX4O43316 HIST4H4-204ENST00000539745 577 ntAPPRIS P1 BASIC11.59□□□□□ -0.55
PAX4O43316 AP000763.4-201ENST00000544674 752 ntTSL 5 BASIC11.59□□□□□ -0.55
PAX4O43316 BRF1-219ENST00000551787 824 ntTSL 1 (best) BASIC11.59□□□□□ -0.55
PAX4O43316 HAGH-208ENST00000566709 1291 ntTSL 5 BASIC11.59□□□□□ -0.55
PAX4O43316 MIR3908-201ENST00000579798 126 ntBASIC11.59□□□□□ -0.55
PAX4O43316 SNHG15-206ENST00000580528 1073 ntTSL 2 BASIC11.59□□□□□ -0.55
PAX4O43316 RPL27-206ENST00000589913 697 ntAPPRIS P1 TSL 1 (best) BASIC11.59□□□□□ -0.55
PAX4O43316 MTX1-207ENST00000609421 1085 ntAPPRIS P1 TSL 1 (best) BASIC11.59□□□□□ -0.55
PAX4O43316 SBK3-202ENST00000612221 1270 ntAPPRIS P1 TSL 5 BASIC11.59□□□□□ -0.55
PAX4O43316 C20orf181-201ENST00000623918 480 ntBASIC11.59□□□□□ -0.55
PAX4O43316 FUK-207ENST00000571514 3054 ntTSL 2 BASIC11.59□□□□□ -0.55
PAX4O43316 SMARCA2-204ENST00000357248 5855 ntAPPRIS P1 TSL 5 BASIC11.59□□□□□ -0.55
PAX4O43316 C1orf43-201ENST00000350592 1610 ntTSL 1 (best) BASIC11.59□□□□□ -0.55
PAX4O43316 AP004609.1-201ENST00000498872 1646 ntTSL 1 (best) BASIC11.59□□□□□ -0.55
PAX4O43316 CCDC43-202ENST00000457422 2058 ntTSL 1 (best) BASIC11.59□□□□□ -0.55
PAX4O43316 SLC22A12-205ENST00000473690 2522 ntTSL 2 BASIC11.59□□□□□ -0.55
PAX4O43316 SLC29A2-205ENST00000544554 2505 ntAPPRIS P1 TSL 2 BASIC11.59□□□□□ -0.55
PAX4O43316 B3GAT2-201ENST00000230053 6565 ntAPPRIS P1 TSL 1 (best) BASIC11.59□□□□□ -0.55
PAX4O43316 CSPG4-201ENST00000308508 8290 ntAPPRIS P1 TSL 1 (best) BASIC11.59□□□□□ -0.55
PAX4O43316 F7-201ENST00000346342 2409 ntAPPRIS ALT2 TSL 1 (best) BASIC11.59□□□□□ -0.55
PAX4O43316 NQO2-201ENST00000338130 1515 ntAPPRIS P1 TSL 2 BASIC11.59□□□□□ -0.55
PAX4O43316 ACTR3-208ENST00000535589 1530 ntTSL 2 BASIC11.59□□□□□ -0.55
PAX4O43316 CALU-205ENST00000535011 3210 ntTSL 1 (best) BASIC11.59□□□□□ -0.55
PAX4O43316 MAP3K4-201ENST00000348824 5295 ntAPPRIS ALT2 TSL 5 BASIC11.59□□□□□ -0.55
PAX4O43316 TRA2A-202ENST00000392502 2229 ntAPPRIS ALT2 TSL 2 BASIC11.59□□□□□ -0.55
PAX4O43316 ABR-203ENST00000536794 2213 ntTSL 2 BASIC11.59□□□□□ -0.55
PAX4O43316 PDE12-202ENST00000487257 3040 ntTSL 1 (best) BASIC11.59□□□□□ -0.55
PAX4O43316 RSBN1-201ENST00000261441 6621 ntAPPRIS P1 TSL 2 BASIC11.59□□□□□ -0.55
PAX4O43316 TSPAN4-208ENST00000409531 1339 ntTSL 5 BASIC11.59□□□□□ -0.55
PAX4O43316 B3GNT3-202ENST00000595387 1349 ntAPPRIS P1 TSL 1 (best) BASIC11.59□□□□□ -0.55
PAX4O43316 KIAA0319-203ENST00000535378 6896 ntAPPRIS ALT2 TSL 2 BASIC11.59□□□□□ -0.55
PAX4O43316 ANKRD35-202ENST00000544626 3093 ntTSL 5 BASIC11.58□□□□□ -0.55
PAX4O43316 RHCE-201ENST00000294413 1591 ntAPPRIS P2 TSL 1 (best) BASIC11.58□□□□□ -0.55
PAX4O43316 GALE-216ENST00000617979 1566 ntAPPRIS P1 TSL 1 (best) BASIC11.58□□□□□ -0.55
PAX4O43316 MTMR9-201ENST00000221086 7481 ntAPPRIS P1 TSL 1 (best) BASIC11.58□□□□□ -0.56
PAX4O43316 FAM49B-202ENST00000517654 1817 ntAPPRIS P1 TSL 5 BASIC11.58□□□□□ -0.56
PAX4O43316 IGSF11-209ENST00000491903 1487 ntTSL 2 BASIC11.58□□□□□ -0.56
PAX4O43316 PHF24-201ENST00000242315 5718 ntAPPRIS P1 TSL 1 (best) BASIC11.58□□□□□ -0.56
PAX4O43316 TRIM25-201ENST00000316881 5734 ntAPPRIS P1 TSL 1 (best) BASIC11.58□□□□□ -0.56
PAX4O43316 COL17A1-201ENST00000353479 5734 ntAPPRIS P2 TSL 1 (best) BASIC11.58□□□□□ -0.56
PAX4O43316 SUSD5-201ENST00000309558 5008 ntAPPRIS P1 TSL 1 (best) BASIC11.58□□□□□ -0.56
PAX4O43316 FOXP1-218ENST00000498215 2400 ntAPPRIS P3 TSL 2 BASIC11.58□□□□□ -0.56
PAX4O43316 CSK-210ENST00000567571 2443 ntAPPRIS P1 TSL 2 BASIC11.58□□□□□ -0.56
PAX4O43316 NIPA1-201ENST00000337435 6567 ntAPPRIS P4 TSL 1 (best) BASIC11.58□□□□□ -0.56
PAX4O43316 ARCN1-203ENST00000392859 1709 ntTSL 2 BASIC11.58□□□□□ -0.56
PAX4O43316 CALCR-207ENST00000426151 1741 ntAPPRIS P3 TSL 1 (best) BASIC11.58□□□□□ -0.56
PAX4O43316 LRRC59-201ENST00000225972 2910 ntAPPRIS P1 TSL 1 (best) BASIC11.58□□□□□ -0.56
PAX4O43316 EIF4G1-201ENST00000342981 5667 ntAPPRIS ALT1 TSL 1 (best) BASIC11.58□□□□□ -0.56
PAX4O43316 PPIC-201ENST00000306442 1380 ntAPPRIS P1 TSL 1 (best) BASIC11.58□□□□□ -0.56
PAX4O43316 WDR45-206ENST00000376368 1381 ntTSL 1 (best) BASIC11.58□□□□□ -0.56
PAX4O43316 AL662844.4-201ENST00000606367 2838 ntBASIC11.58□□□□□ -0.56
PAX4O43316 AC026412.1-202ENST00000512335 2231 ntTSL 1 (best) BASIC11.58□□□□□ -0.56
PAX4O43316 MAGEF1-201ENST00000317897 1636 ntAPPRIS P1 BASIC11.58□□□□□ -0.56
PAX4O43316 AC005052.1-201ENST00000625181 2492 ntBASIC11.58□□□□□ -0.56
PAX4O43316 NSUN2-201ENST00000264670 3303 ntAPPRIS P3 TSL 1 (best) BASIC11.58□□□□□ -0.56
PAX4O43316 SRPX-201ENST00000378533 1874 ntAPPRIS P3 TSL 1 (best) BASIC11.58□□□□□ -0.56
PAX4O43316 PIKFYVE-204ENST00000407449 1898 ntTSL 1 (best) BASIC11.58□□□□□ -0.56
PAX4O43316 JADE2-201ENST00000282605 2748 ntAPPRIS P1 TSL 2 BASIC11.58□□□□□ -0.56
PAX4O43316 XPO6-201ENST00000304658 4422 ntAPPRIS P1 TSL 1 (best) BASIC11.58□□□□□ -0.56
PAX4O43316 PNKD-202ENST00000258362 2991 ntAPPRIS ALT2 TSL 1 (best) BASIC11.58□□□□□ -0.56
PAX4O43316 CGREF1-201ENST00000260595 1177 ntAPPRIS ALT2 TSL 5 BASIC11.58□□□□□ -0.56
PAX4O43316 TNNC2-202ENST00000372557 780 ntTSL 3 BASIC11.58□□□□□ -0.56
PAX4O43316 C2orf49-202ENST00000410049 854 ntTSL 1 (best) BASIC11.58□□□□□ -0.56
PAX4O43316 C11orf74-203ENST00000446510 1062 ntAPPRIS P3 TSL 5 BASIC11.58□□□□□ -0.56
PAX4O43316 NECAP2-208ENST00000504551 768 ntTSL 5 BASIC11.58□□□□□ -0.56
PAX4O43316 LINC02123-201ENST00000514869 885 ntTSL 1 (best) BASIC11.58□□□□□ -0.56
PAX4O43316 AC019257.1-202ENST00000521498 445 ntTSL 5 BASIC11.58□□□□□ -0.56
PAX4O43316 QPRT-203ENST00000562473 579 ntTSL 3 BASIC11.58□□□□□ -0.56
PAX4O43316 RARRES2P8-201ENST00000566335 367 ntBASIC11.58□□□□□ -0.56
PAX4O43316 MARVELD3-206ENST00000567566 850 ntAPPRIS ALT2 TSL 1 (best) BASIC11.58□□□□□ -0.56
PAX4O43316 IGFLR1-205ENST00000588992 730 ntAPPRIS ALT2 TSL 2 BASIC11.58□□□□□ -0.56
PAX4O43316 SLC1A6-208ENST00000598504 2987 ntTSL 1 (best) BASIC11.58□□□□□ -0.56
PAX4O43316 IRF1-211ENST00000613424 821 ntTSL 1 (best) BASIC11.58□□□□□ -0.56
PAX4O43316 GMPPA-202ENST00000341142 1524 ntAPPRIS P1 TSL 5 BASIC11.58□□□□□ -0.56
PAX4O43316 GOPC-201ENST00000052569 4590 ntAPPRIS P1 TSL 1 (best) BASIC11.58□□□□□ -0.56
PAX4O43316 GRAMD1A-202ENST00000411896 2523 ntAPPRIS ALT2 TSL 2 BASIC11.58□□□□□ -0.56
PAX4O43316 XRCC3-209ENST00000554913 2539 ntAPPRIS P1 TSL 2 BASIC11.58□□□□□ -0.56
PAX4O43316 PRDM15-201ENST00000269844 4881 ntAPPRIS P3 TSL 1 (best) BASIC11.58□□□□□ -0.56
Retrieved 100 of 98,524 protein–RNA pairs in 32.6 ms