Protein–RNA interactions for Protein: Q9H0A8

COMMD4, COMM domain-containing protein 4, humanhuman

Predictions only

Length 199 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COMMD4Q9H0A8 DENND4C-209ENST00000602925 6831 ntAPPRIS P1 TSL 5 BASIC14.31□□□□□ -0.12
COMMD4Q9H0A8 TMEM181-201ENST00000367090 5390 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
COMMD4Q9H0A8 DGKZ-205ENST00000456247 3482 ntAPPRIS ALT2 TSL 1 (best) BASIC14.31□□□□□ -0.12
COMMD4Q9H0A8 NACC1-201ENST00000292431 4445 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
COMMD4Q9H0A8 MFSD5-202ENST00000534842 2038 ntTSL 2 BASIC14.31□□□□□ -0.12
COMMD4Q9H0A8 TBC1D17-202ENST00000535102 2025 ntTSL 2 BASIC14.31□□□□□ -0.12
COMMD4Q9H0A8 TEAD4-202ENST00000359864 1690 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
COMMD4Q9H0A8 RASSF1-205ENST00000395126 1657 ntTSL 1 (best) BASIC14.31□□□□□ -0.12
COMMD4Q9H0A8 FAM53C-202ENST00000434981 1686 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
COMMD4Q9H0A8 SNX30-201ENST00000374232 7622 ntAPPRIS P1 TSL 5 BASIC14.31□□□□□ -0.12
COMMD4Q9H0A8 DHDH-201ENST00000221403 1081 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
COMMD4Q9H0A8 TYMS-202ENST00000323250 693 ntTSL 1 (best) BASIC14.31□□□□□ -0.12
COMMD4Q9H0A8 YIF1B-203ENST00000339413 1225 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
COMMD4Q9H0A8 PQLC3-202ENST00000402361 696 ntTSL 2 BASIC14.31□□□□□ -0.12
COMMD4Q9H0A8 HAUS4P1-201ENST00000406739 1145 ntBASIC14.31□□□□□ -0.12
COMMD4Q9H0A8 C7orf34-201ENST00000409607 766 ntAPPRIS P2 TSL 1 (best) BASIC14.31□□□□□ -0.12
COMMD4Q9H0A8 VMO1-203ENST00000416307 712 ntTSL 2 BASIC14.31□□□□□ -0.12
COMMD4Q9H0A8 TRA2B-205ENST00000453386 2952 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
COMMD4Q9H0A8 SAPCD2P3-201ENST00000455031 850 ntBASIC14.31□□□□□ -0.12
COMMD4Q9H0A8 AL611929.1-201ENST00000457340 449 ntTSL 3 BASIC14.31□□□□□ -0.12
COMMD4Q9H0A8 BANK1-207ENST00000508653 2115 ntTSL 1 (best) BASIC14.31□□□□□ -0.12
COMMD4Q9H0A8 IGLL5-201ENST00000526893 1050 ntAPPRIS P2 TSL 1 (best) BASIC14.31□□□□□ -0.12
COMMD4Q9H0A8 IGLL5-202ENST00000531372 882 ntTSL 1 (best) BASIC14.31□□□□□ -0.12
COMMD4Q9H0A8 AP1S2-206ENST00000545766 576 ntTSL 1 (best) BASIC14.31□□□□□ -0.12
COMMD4Q9H0A8 AL450267.1-201ENST00000557174 520 ntTSL 5 BASIC14.31□□□□□ -0.12
COMMD4Q9H0A8 ATPAF2-213ENST00000585101 566 ntTSL 4 BASIC14.31□□□□□ -0.12
COMMD4Q9H0A8 AC008878.2-201ENST00000601870 942 ntAPPRIS P1 TSL 4 BASIC14.31□□□□□ -0.12
COMMD4Q9H0A8 LINC01666-201ENST00000623794 845 ntTSL 5 BASIC14.31□□□□□ -0.12
COMMD4Q9H0A8 KCP-203ENST00000610776 5108 ntTSL 5 BASIC14.31□□□□□ -0.12
COMMD4Q9H0A8 CNOT10-202ENST00000331889 2573 ntTSL 1 (best) BASIC14.31□□□□□ -0.12
COMMD4Q9H0A8 HAP1-204ENST00000393939 5683 ntTSL 1 (best) BASIC14.31□□□□□ -0.12
COMMD4Q9H0A8 TMEM216-201ENST00000334888 1306 ntAPPRIS ALT2 TSL 2 BASIC14.31□□□□□ -0.12
COMMD4Q9H0A8 FLT3LG-204ENST00000595510 1301 ntTSL 5 BASIC14.31□□□□□ -0.12
COMMD4Q9H0A8 DUSP13-210ENST00000491677 1770 ntAPPRIS P3 TSL 1 (best) BASIC14.31□□□□□ -0.12
COMMD4Q9H0A8 SPDEF-202ENST00000544425 1866 ntAPPRIS ALT1 TSL 2 BASIC14.31□□□□□ -0.12
COMMD4Q9H0A8 AC068831.3-201ENST00000553321 1858 ntTSL 2 BASIC14.31□□□□□ -0.12
COMMD4Q9H0A8 PPT1-215ENST00000641471 2368 ntBASIC14.31□□□□□ -0.12
COMMD4Q9H0A8 FAM46C-201ENST00000369448 5751 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
COMMD4Q9H0A8 PCDHB14-201ENST00000239449 4828 ntAPPRIS P1 BASIC14.31□□□□□ -0.12
COMMD4Q9H0A8 XKR5-201ENST00000618742 4893 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
COMMD4Q9H0A8 PKD1L2-209ENST00000531391 1488 ntTSL 1 (best) BASIC14.31□□□□□ -0.12
COMMD4Q9H0A8 EPS15L1-207ENST00000594975 2489 ntTSL 2 BASIC14.31□□□□□ -0.12
COMMD4Q9H0A8 UBA5-213ENST00000494238 2997 ntTSL 1 (best) BASIC14.31□□□□□ -0.12
COMMD4Q9H0A8 SNX19-201ENST00000265909 6535 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
COMMD4Q9H0A8 TNFRSF14-AS1-201ENST00000416860 3522 ntTSL 2 BASIC14.31□□□□□ -0.12
COMMD4Q9H0A8 COL17A1-201ENST00000353479 5734 ntAPPRIS P2 TSL 1 (best) BASIC14.3□□□□□ -0.12
COMMD4Q9H0A8 SLC22A6-203ENST00000421062 1560 ntTSL 1 (best) BASIC14.3□□□□□ -0.12
COMMD4Q9H0A8 LCK-206ENST00000373564 2137 ntTSL 5 BASIC14.3□□□□□ -0.12
COMMD4Q9H0A8 MSI2-204ENST00000442934 1624 ntTSL 2 BASIC14.3□□□□□ -0.12
COMMD4Q9H0A8 ATP6AP2-225ENST00000637482 1648 ntAPPRIS ALT2 TSL 5 BASIC14.3□□□□□ -0.12
COMMD4Q9H0A8 SLC6A13-201ENST00000343164 2185 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
COMMD4Q9H0A8 TNFRSF10A-201ENST00000221132 2714 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
COMMD4Q9H0A8 ACP2-201ENST00000256997 2203 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
COMMD4Q9H0A8 KIF26B-202ENST00000407071 7287 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
COMMD4Q9H0A8 LUC7L3-202ENST00000393227 2284 ntTSL 1 (best) BASIC14.3□□□□□ -0.12
COMMD4Q9H0A8 GLIDR-204ENST00000638724 1765 ntTSL 5 BASIC14.3□□□□□ -0.12
COMMD4Q9H0A8 ACOX3-202ENST00000413009 2374 ntTSL 1 (best) BASIC14.3□□□□□ -0.12
COMMD4Q9H0A8 CCNY-201ENST00000265375 4768 ntAPPRIS ALT1 TSL 1 (best) BASIC14.3□□□□□ -0.12
COMMD4Q9H0A8 NPHP4-211ENST00000622020 3004 ntTSL 5 BASIC14.3□□□□□ -0.12
COMMD4Q9H0A8 LDLR-204ENST00000545707 2429 ntTSL 2 BASIC14.3□□□□□ -0.12
COMMD4Q9H0A8 TK2-203ENST00000451102 3738 ntAPPRIS ALT2 TSL 1 (best) BASIC14.3□□□□□ -0.12
COMMD4Q9H0A8 ISCU-201ENST00000311893 994 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
COMMD4Q9H0A8 UBE2C-204ENST00000356455 850 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
COMMD4Q9H0A8 ZNF593-202ENST00000374266 675 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
COMMD4Q9H0A8 TRIM36-203ENST00000379618 693 ntTSL 1 (best) BASIC14.3□□□□□ -0.12
COMMD4Q9H0A8 MRPL20P1-201ENST00000400819 433 ntBASIC14.3□□□□□ -0.12
COMMD4Q9H0A8 KRT18P27-201ENST00000427733 1299 ntBASIC14.3□□□□□ -0.12
COMMD4Q9H0A8 ARPC4-203ENST00000433034 926 ntTSL 3 BASIC14.3□□□□□ -0.12
COMMD4Q9H0A8 PGAP2-206ENST00000459679 795 ntTSL 2 BASIC14.3□□□□□ -0.12
COMMD4Q9H0A8 RNASET2-206ENST00000476238 887 ntAPPRIS P1 TSL 5 BASIC14.3□□□□□ -0.12
COMMD4Q9H0A8 SKP2-204ENST00000508514 821 ntTSL 3 BASIC14.3□□□□□ -0.12
COMMD4Q9H0A8 BATF2-204ENST00000527716 1230 ntTSL 2 BASIC14.3□□□□□ -0.12
COMMD4Q9H0A8 OR7E14P-202ENST00000530490 1290 ntBASIC14.3□□□□□ -0.12
COMMD4Q9H0A8 PLPP5-214ENST00000531823 875 ntTSL 3 BASIC14.3□□□□□ -0.12
COMMD4Q9H0A8 AL589182.1-202ENST00000548416 533 ntTSL 4 BASIC14.3□□□□□ -0.12
COMMD4Q9H0A8 ETFA-208ENST00000559602 792 ntTSL 3 BASIC14.3□□□□□ -0.12
COMMD4Q9H0A8 MIR4515-201ENST00000584082 81 ntBASIC14.3□□□□□ -0.12
COMMD4Q9H0A8 LINC00910-203ENST00000587874 544 ntTSL 4 BASIC14.3□□□□□ -0.12
COMMD4Q9H0A8 CYGB-205ENST00000590175 830 ntTSL 3 BASIC14.3□□□□□ -0.12
COMMD4Q9H0A8 LCE1C-202ENST00000607093 644 ntAPPRIS P2 BASIC14.3□□□□□ -0.12
COMMD4Q9H0A8 AC018529.2-201ENST00000612024 828 ntTSL 4 BASIC14.3□□□□□ -0.12
COMMD4Q9H0A8 MCRIP2-211ENST00000629534 341 ntTSL 2 BASIC14.3□□□□□ -0.12
COMMD4Q9H0A8 CDH1-202ENST00000422392 2567 ntTSL 1 (best) BASIC14.3□□□□□ -0.12
COMMD4Q9H0A8 YARS-201ENST00000373477 3238 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
COMMD4Q9H0A8 NOTO-201ENST00000398468 2749 ntAPPRIS P1 TSL 2 BASIC14.3□□□□□ -0.12
COMMD4Q9H0A8 CCDC68-204ENST00000591504 4132 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
COMMD4Q9H0A8 AC023157.3-201ENST00000619086 2088 ntBASIC14.3□□□□□ -0.12
COMMD4Q9H0A8 CFAP43-203ENST00000369719 1434 ntTSL 2 BASIC14.3□□□□□ -0.12
COMMD4Q9H0A8 PIGW-204ENST00000614443 2312 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
COMMD4Q9H0A8 COLEC11-209ENST00000418971 1595 ntTSL 2 BASIC14.3□□□□□ -0.12
COMMD4Q9H0A8 AC008677.1-201ENST00000519230 1561 ntBASIC14.3□□□□□ -0.12
COMMD4Q9H0A8 ATG9A-205ENST00000409618 4025 ntAPPRIS P1 TSL 5 BASIC14.3□□□□□ -0.12
COMMD4Q9H0A8 ARPC5-201ENST00000294742 1637 ntAPPRIS ALT1 TSL 1 (best) BASIC14.3□□□□□ -0.12
COMMD4Q9H0A8 AC067750.1-201ENST00000608826 6545 ntBASIC14.3□□□□□ -0.12
COMMD4Q9H0A8 ABTB2-201ENST00000435224 4902 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
COMMD4Q9H0A8 TMEM263-201ENST00000280756 3362 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
COMMD4Q9H0A8 TMTC1-206ENST00000551659 4228 ntAPPRIS ALT2 TSL 5 BASIC14.3□□□□□ -0.12
COMMD4Q9H0A8 TMEM97-201ENST00000226230 2568 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
COMMD4Q9H0A8 RNF32-204ENST00000392743 1746 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
COMMD4Q9H0A8 WIPF3-202ENST00000409123 3491 ntAPPRIS ALT2 TSL 5 BASIC14.29□□□□□ -0.12
Retrieved 100 of 98,524 protein–RNA pairs in 53.2 ms