Protein–RNA interactions for Protein: Q9BYE3

LCE3D, Late cornified envelope protein 3D, humanhuman

Predictions only

Length 92 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LCE3DQ9BYE3 PACRGL-207ENST00000502938 810 ntTSL 4 BASIC4.38□□□□□ -1.71
LCE3DQ9BYE3 ZNF346-203ENST00000503425 1191 ntTSL 2 BASIC4.38□□□□□ -1.71
LCE3DQ9BYE3 CXCL2-202ENST00000508487 1218 ntAPPRIS P1 TSL 1 (best) BASIC4.38□□□□□ -1.71
LCE3DQ9BYE3 PENK-204ENST00000518770 863 ntTSL 2 BASIC4.38□□□□□ -1.71
LCE3DQ9BYE3 IKBKB-210ENST00000518983 447 ntTSL 2 BASIC4.38□□□□□ -1.71
LCE3DQ9BYE3 FOSL1-203ENST00000531493 1200 ntTSL 1 (best) BASIC4.38□□□□□ -1.71
LCE3DQ9BYE3 GCHFR-202ENST00000558467 785 ntTSL 2 BASIC4.38□□□□□ -1.71
LCE3DQ9BYE3 USP3-AS1-204ENST00000559861 620 ntTSL 5 BASIC4.38□□□□□ -1.71
LCE3DQ9BYE3 MIEF2-207ENST00000578621 540 ntTSL 4 BASIC4.38□□□□□ -1.71
LCE3DQ9BYE3 LIMD2-211ENST00000583211 1298 ntTSL 3 BASIC4.38□□□□□ -1.71
LCE3DQ9BYE3 IFT20-215ENST00000585313 852 ntAPPRIS P4 TSL 3 BASIC4.38□□□□□ -1.71
LCE3DQ9BYE3 PDCD5-207ENST00000590247 699 ntAPPRIS P1 TSL 1 (best) BASIC4.38□□□□□ -1.71
LCE3DQ9BYE3 AC008686.1-203ENST00000591826 463 ntTSL 2 BASIC4.38□□□□□ -1.71
LCE3DQ9BYE3 AC011446.2-202ENST00000592882 756 ntTSL 3 BASIC4.38□□□□□ -1.71
LCE3DQ9BYE3 AC011511.2-201ENST00000592893 918 ntTSL 3 BASIC4.38□□□□□ -1.71
LCE3DQ9BYE3 GPR32P1-201ENST00000601788 811 ntBASIC4.38□□□□□ -1.71
LCE3DQ9BYE3 AC016737.2-201ENST00000609273 358 ntTSL 3 BASIC4.38□□□□□ -1.71
LCE3DQ9BYE3 SLF2-205ENST00000609386 891 ntAPPRIS ALT2 BASIC4.38□□□□□ -1.71
LCE3DQ9BYE3 MMD2-204ENST00000612910 778 ntTSL 5 BASIC4.38□□□□□ -1.71
LCE3DQ9BYE3 LITAF-220ENST00000620789 692 ntTSL 5 BASIC4.38□□□□□ -1.71
LCE3DQ9BYE3 AC009477.2-201ENST00000635976 171 ntAPPRIS P1 BASIC4.38□□□□□ -1.71
LCE3DQ9BYE3 CLN3-259ENST00000637551 1083 ntTSL 5 BASIC4.38□□□□□ -1.71
LCE3DQ9BYE3 RPS27A-211ENST00000639844 606 ntTSL 5 BASIC4.38□□□□□ -1.71
LCE3DQ9BYE3 AC064853.5-201ENST00000641976 258 ntAPPRIS P1 BASIC4.38□□□□□ -1.71
LCE3DQ9BYE3 NDUFAB1-201ENST00000007516 717 ntAPPRIS P1 TSL 1 (best) BASIC4.38□□□□□ -1.71
LCE3DQ9BYE3 TAF5-201ENST00000369839 3268 ntAPPRIS P1 TSL 1 (best) BASIC4.38□□□□□ -1.71
LCE3DQ9BYE3 LDB3-202ENST00000361373 5297 ntAPPRIS P3 TSL 1 (best) BASIC4.38□□□□□ -1.71
LCE3DQ9BYE3 TCAF2P1-201ENST00000291129 2421 ntBASIC4.38□□□□□ -1.71
LCE3DQ9BYE3 ZSCAN10-209ENST00000576985 2739 ntAPPRIS P1 TSL 5 BASIC4.38□□□□□ -1.71
LCE3DQ9BYE3 FYN-202ENST00000354650 3628 ntAPPRIS P4 TSL 1 (best) BASIC4.38□□□□□ -1.71
LCE3DQ9BYE3 FUT3-209ENST00000589918 2182 ntAPPRIS P1 TSL 1 (best) BASIC4.38□□□□□ -1.71
LCE3DQ9BYE3 DDX20-201ENST00000369702 4212 ntAPPRIS P1 TSL 1 (best) BASIC4.38□□□□□ -1.71
LCE3DQ9BYE3 POLG-201ENST00000268124 4500 ntAPPRIS P1 TSL 1 (best) BASIC4.38□□□□□ -1.71
LCE3DQ9BYE3 MC1R-202ENST00000555147 3099 ntAPPRIS P1 BASIC4.38□□□□□ -1.71
LCE3DQ9BYE3 CRLS1-201ENST00000378863 3958 ntAPPRIS P1 TSL 1 (best) BASIC4.38□□□□□ -1.71
LCE3DQ9BYE3 RPLP0-219ENST00000551150 1344 ntAPPRIS P1 TSL 1 (best) BASIC4.38□□□□□ -1.71
LCE3DQ9BYE3 BSG-202ENST00000346916 1605 ntTSL 1 (best) BASIC4.38□□□□□ -1.71
LCE3DQ9BYE3 PDE9A-205ENST00000349112 1616 ntTSL 1 (best) BASIC4.38□□□□□ -1.71
LCE3DQ9BYE3 LCOR-203ENST00000371097 4852 ntAPPRIS P3 TSL 1 (best) BASIC4.38□□□□□ -1.71
LCE3DQ9BYE3 ACOT7-204ENST00000377855 1614 ntAPPRIS P4 TSL 1 (best) BASIC4.38□□□□□ -1.71
LCE3DQ9BYE3 NSDHL-203ENST00000440023 1630 ntAPPRIS P2 TSL 5 BASIC4.38□□□□□ -1.71
LCE3DQ9BYE3 POLR2M-206ENST00000494490 1648 ntTSL 5 BASIC4.38□□□□□ -1.71
LCE3DQ9BYE3 NISCH-207ENST00000479054 5173 ntAPPRIS P3 TSL 1 (best) BASIC4.38□□□□□ -1.71
LCE3DQ9BYE3 ADAD1-203ENST00000388725 1918 ntTSL 2 BASIC4.38□□□□□ -1.71
LCE3DQ9BYE3 POLR1D-212ENST00000630983 1931 ntTSL 5 BASIC4.38□□□□□ -1.71
LCE3DQ9BYE3 ABHD14B-201ENST00000315877 2236 ntTSL 5 BASIC4.38□□□□□ -1.71
LCE3DQ9BYE3 DCP1B-202ENST00000535873 2231 ntTSL 2 BASIC4.38□□□□□ -1.71
LCE3DQ9BYE3 AC005089.1-201ENST00000619486 2241 ntBASIC4.38□□□□□ -1.71
LCE3DQ9BYE3 RASGRF2-206ENST00000638442 2842 ntTSL 5 BASIC4.38□□□□□ -1.71
LCE3DQ9BYE3 RASD2-201ENST00000216127 3412 ntAPPRIS P1 TSL 1 (best) BASIC4.38□□□□□ -1.71
LCE3DQ9BYE3 SLC40A1-201ENST00000261024 3442 ntAPPRIS P1 TSL 1 (best) BASIC4.38□□□□□ -1.71
LCE3DQ9BYE3 FAM122B-202ENST00000343004 4326 ntAPPRIS ALT2 TSL 1 (best) BASIC4.38□□□□□ -1.71
LCE3DQ9BYE3 PSME4-202ENST00000404125 7099 ntAPPRIS P1 TSL 1 (best) BASIC4.38□□□□□ -1.71
LCE3DQ9BYE3 SMARCA2-209ENST00000382203 5867 ntTSL 1 (best) BASIC4.38□□□□□ -1.71
LCE3DQ9BYE3 GRB2-201ENST00000316615 3181 ntTSL 5 BASIC4.38□□□□□ -1.71
LCE3DQ9BYE3 ADAMTSL1-205ENST00000380548 8030 ntAPPRIS P1 TSL 5 BASIC4.38□□□□□ -1.71
LCE3DQ9BYE3 UVSSA-206ENST00000507531 2597 ntAPPRIS P2 TSL 1 (best) BASIC4.38□□□□□ -1.71
LCE3DQ9BYE3 SNX14-215ENST00000513865 2259 ntTSL 5 BASIC4.38□□□□□ -1.71
LCE3DQ9BYE3 LRRC71-201ENST00000337428 1959 ntAPPRIS P1 TSL 1 (best) BASIC4.38□□□□□ -1.71
LCE3DQ9BYE3 HAPLN3-201ENST00000359595 1980 ntAPPRIS P1 TSL 1 (best) BASIC4.38□□□□□ -1.71
LCE3DQ9BYE3 CLEC18C-203ENST00000541793 1955 ntAPPRIS P2 TSL 1 (best) BASIC4.38□□□□□ -1.71
LCE3DQ9BYE3 CLEC18C-210ENST00000569347 1970 ntAPPRIS P2 TSL 1 (best) BASIC4.38□□□□□ -1.71
LCE3DQ9BYE3 PDLIM7-202ENST00000355841 1689 ntAPPRIS P4 TSL 1 (best) BASIC4.38□□□□□ -1.71
LCE3DQ9BYE3 WDR45-202ENST00000356463 1688 ntTSL 1 (best) BASIC4.38□□□□□ -1.71
LCE3DQ9BYE3 ATG14-201ENST00000247178 4742 ntAPPRIS P1 TSL 1 (best) BASIC4.38□□□□□ -1.71
LCE3DQ9BYE3 PROM2-201ENST00000317620 4728 ntAPPRIS P1 TSL 1 (best) BASIC4.38□□□□□ -1.71
LCE3DQ9BYE3 AL358334.2-201ENST00000553648 4714 ntTSL 2 BASIC4.38□□□□□ -1.71
LCE3DQ9BYE3 GPS2-201ENST00000380728 1379 ntAPPRIS P1 TSL 1 (best) BASIC4.38□□□□□ -1.71
LCE3DQ9BYE3 PPP1R26P4-201ENST00000619065 3527 ntBASIC4.38□□□□□ -1.71
LCE3DQ9BYE3 ARFGAP2-202ENST00000426335 2937 ntTSL 2 BASIC4.38□□□□□ -1.71
LCE3DQ9BYE3 CYP4F22-201ENST00000269703 2641 ntAPPRIS P1 TSL 2 BASIC4.38□□□□□ -1.71
LCE3DQ9BYE3 TIE1-201ENST00000372476 3882 ntAPPRIS P1 TSL 1 (best) BASIC4.38□□□□□ -1.71
LCE3DQ9BYE3 PKD2L2-205ENST00000508638 2333 ntTSL 1 (best) BASIC4.38□□□□□ -1.71
LCE3DQ9BYE3 FAM193A-201ENST00000324666 4846 ntAPPRIS ALT2 TSL 1 (best) BASIC4.38□□□□□ -1.71
LCE3DQ9BYE3 FAM151A-201ENST00000302250 2005 ntAPPRIS P2 TSL 1 (best) BASIC4.38□□□□□ -1.71
LCE3DQ9BYE3 TNFSF13-202ENST00000349228 2036 ntTSL 1 (best) BASIC4.38□□□□□ -1.71
LCE3DQ9BYE3 HTR1B-201ENST00000369947 2021 ntAPPRIS P1 BASIC4.38□□□□□ -1.71
LCE3DQ9BYE3 ZNF397-204ENST00000585800 2046 ntTSL 5 BASIC4.38□□□□□ -1.71
LCE3DQ9BYE3 P3H1-201ENST00000236040 2993 ntAPPRIS ALT2 TSL 2 BASIC4.38□□□□□ -1.71
LCE3DQ9BYE3 SYBU-219ENST00000528647 2995 ntAPPRIS P4 TSL 2 BASIC4.38□□□□□ -1.71
LCE3DQ9BYE3 FKBP8-201ENST00000222308 1710 ntAPPRIS ALT1 TSL 1 (best) BASIC4.38□□□□□ -1.71
LCE3DQ9BYE3 KCNH4-201ENST00000264661 3920 ntAPPRIS P1 TSL 1 (best) BASIC4.38□□□□□ -1.71
LCE3DQ9BYE3 ENDOV-213ENST00000520367 2680 ntTSL 2 BASIC4.38□□□□□ -1.71
LCE3DQ9BYE3 ARHGAP6-204ENST00000380718 3632 ntAPPRIS ALT2 TSL 1 (best) BASIC4.38□□□□□ -1.71
LCE3DQ9BYE3 NEDD4L-205ENST00000400345 3647 ntAPPRIS P4 TSL 1 (best) BASIC4.38□□□□□ -1.71
LCE3DQ9BYE3 THSD7A-205ENST00000617773 10583 ntAPPRIS ALT2 TSL 5 BASIC4.38□□□□□ -1.71
LCE3DQ9BYE3 DPP6-205ENST00000427557 2388 ntTSL 2 BASIC4.38□□□□□ -1.71
LCE3DQ9BYE3 BCAT2-209ENST00000599246 1449 ntTSL 1 (best) BASIC4.38□□□□□ -1.71
LCE3DQ9BYE3 PHTF1-202ENST00000369598 3000 ntTSL 5 BASIC4.38□□□□□ -1.71
LCE3DQ9BYE3 SOX14-201ENST00000306087 2055 ntAPPRIS P1 BASIC4.37□□□□□ -1.71
LCE3DQ9BYE3 DDOST-201ENST00000375048 2079 ntTSL 1 (best) BASIC4.37□□□□□ -1.71
LCE3DQ9BYE3 TNS1-205ENST00000419504 5921 ntAPPRIS ALT2 TSL 1 (best) BASIC4.37□□□□□ -1.71
LCE3DQ9BYE3 TNS1-207ENST00000430930 5900 ntAPPRIS ALT2 TSL 1 (best) BASIC4.37□□□□□ -1.71
LCE3DQ9BYE3 ADAMTS13-202ENST00000356589 4349 ntAPPRIS ALT2 TSL 1 (best) BASIC4.37□□□□□ -1.71
LCE3DQ9BYE3 PRKAR1A-203ENST00000392711 4327 ntAPPRIS P1 TSL 5 BASIC4.37□□□□□ -1.71
LCE3DQ9BYE3 SNED1-201ENST00000310397 8174 ntAPPRIS P2 TSL 5 BASIC4.37□□□□□ -1.71
LCE3DQ9BYE3 NAPEPLD-201ENST00000341533 4972 ntAPPRIS P1 TSL 1 (best) BASIC4.37□□□□□ -1.71
LCE3DQ9BYE3 LRFN1-201ENST00000248668 3381 ntAPPRIS P1 TSL 1 (best) BASIC4.37□□□□□ -1.71
LCE3DQ9BYE3 WTIP-202ENST00000590071 13665 ntAPPRIS P1 TSL 1 (best) BASIC4.37□□□□□ -1.71
LCE3DQ9BYE3 SLC25A45-214ENST00000534028 2432 ntTSL 1 (best) BASIC4.37□□□□□ -1.71
Retrieved 100 of 98,524 protein–RNA pairs in 52.4 ms