Protein–RNA interactions for Protein: Q9BWW4

SSBP3, Single-stranded DNA-binding protein 3, humanhuman

Predicted RBP Predictions only

Length 388 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SSBP3Q9BWW4 NIPA2-204ENST00000398014 3130 ntAPPRIS P1 TSL 5 BASIC13.5□□□□□ -0.25
SSBP3Q9BWW4 GLYCTK-207ENST00000477382 1304 ntTSL 1 (best) BASIC13.5□□□□□ -0.25
SSBP3Q9BWW4 PUS1-208ENST00000542167 2151 ntTSL 5 BASIC13.5□□□□□ -0.25
SSBP3Q9BWW4 MICALL1-201ENST00000215957 4710 ntAPPRIS P1 TSL 1 (best) BASIC13.5□□□□□ -0.25
SSBP3Q9BWW4 PRX-201ENST00000291825 5502 ntAPPRIS P1 TSL 1 (best) BASIC13.5□□□□□ -0.25
SSBP3Q9BWW4 CABP5-201ENST00000293255 1257 ntAPPRIS P1 TSL 1 (best) BASIC13.5□□□□□ -0.25
SSBP3Q9BWW4 POLR1C-201ENST00000304004 1280 ntTSL 1 (best) BASIC13.5□□□□□ -0.25
SSBP3Q9BWW4 POP5-202ENST00000357500 801 ntAPPRIS P1 TSL 1 (best) BASIC13.5□□□□□ -0.25
SSBP3Q9BWW4 TMEM37-202ENST00000409826 794 ntTSL 3 BASIC13.5□□□□□ -0.25
SSBP3Q9BWW4 HNRNPA1P40-201ENST00000426371 1278 ntBASIC13.5□□□□□ -0.25
SSBP3Q9BWW4 FAM8A3P-201ENST00000427218 844 ntBASIC13.5□□□□□ -0.25
SSBP3Q9BWW4 BCRP1-201ENST00000444246 691 ntBASIC13.5□□□□□ -0.25
SSBP3Q9BWW4 AL359764.1-201ENST00000444330 504 ntTSL 3 BASIC13.5□□□□□ -0.25
SSBP3Q9BWW4 AC097493.3-201ENST00000509725 367 ntBASIC13.5□□□□□ -0.25
SSBP3Q9BWW4 AC027369.6-201ENST00000525520 931 ntBASIC13.5□□□□□ -0.25
SSBP3Q9BWW4 AC008750.1-201ENST00000532473 492 ntTSL 3 BASIC13.5□□□□□ -0.25
SSBP3Q9BWW4 PPP1R14B-203ENST00000542235 920 ntTSL 1 (best) BASIC13.5□□□□□ -0.25
SSBP3Q9BWW4 RNF24-204ENST00000545616 1128 ntTSL 1 (best) BASIC13.5□□□□□ -0.25
SSBP3Q9BWW4 TMEM5-AS1-201ENST00000546214 563 ntTSL 4 BASIC13.5□□□□□ -0.25
SSBP3Q9BWW4 AC105021.1-202ENST00000570572 669 ntBASIC13.5□□□□□ -0.25
SSBP3Q9BWW4 LITAF-210ENST00000571976 548 ntTSL 2 BASIC13.5□□□□□ -0.25
SSBP3Q9BWW4 LITAF-214ENST00000574703 486 ntTSL 2 BASIC13.5□□□□□ -0.25
SSBP3Q9BWW4 AJ003147.2-201ENST00000576468 629 ntTSL 3 BASIC13.5□□□□□ -0.25
SSBP3Q9BWW4 MZF1-202ENST00000594108 1110 ntTSL 1 (best) BASIC13.5□□□□□ -0.25
SSBP3Q9BWW4 AC010336.3-201ENST00000597156 667 ntTSL 2 BASIC13.5□□□□□ -0.25
SSBP3Q9BWW4 LAMTOR5-208ENST00000614544 846 ntTSL 1 (best) BASIC13.5□□□□□ -0.25
SSBP3Q9BWW4 DRC3-201ENST00000313838 2064 ntAPPRIS P1 TSL 5 BASIC13.5□□□□□ -0.25
SSBP3Q9BWW4 HNRNPA3-201ENST00000392524 2067 ntAPPRIS P3 TSL 5 BASIC13.5□□□□□ -0.25
SSBP3Q9BWW4 MYB-201ENST00000316528 3571 ntTSL 5 BASIC13.5□□□□□ -0.25
SSBP3Q9BWW4 MYB-241ENST00000616088 3573 ntTSL 5 BASIC13.5□□□□□ -0.25
SSBP3Q9BWW4 AC009292.1-201ENST00000502156 1986 ntTSL 1 (best) BASIC13.5□□□□□ -0.25
SSBP3Q9BWW4 AC092143.3-201ENST00000565150 1900 ntTSL 5 BASIC13.5□□□□□ -0.25
SSBP3Q9BWW4 PANK4-201ENST00000378466 2677 ntAPPRIS P1 TSL 1 (best) BASIC13.5□□□□□ -0.25
SSBP3Q9BWW4 PSMD2-201ENST00000310118 3449 ntAPPRIS P1 TSL 1 (best) BASIC13.5□□□□□ -0.25
SSBP3Q9BWW4 MAPKAP1-206ENST00000373511 3252 ntTSL 1 (best) BASIC13.5□□□□□ -0.25
SSBP3Q9BWW4 WT1-209ENST00000530998 2421 ntTSL 2 BASIC13.5□□□□□ -0.25
SSBP3Q9BWW4 MIER1-205ENST00000371014 1728 ntTSL 2 BASIC13.5□□□□□ -0.25
SSBP3Q9BWW4 LIMS2-217ENST00000545738 1730 ntTSL 5 BASIC13.5□□□□□ -0.25
SSBP3Q9BWW4 TTC8-216ENST00000614125 2377 ntTSL 5 BASIC13.5□□□□□ -0.25
SSBP3Q9BWW4 PDE12-202ENST00000487257 3040 ntTSL 1 (best) BASIC13.5□□□□□ -0.25
SSBP3Q9BWW4 AC063926.3-201ENST00000624734 5658 ntBASIC13.5□□□□□ -0.25
SSBP3Q9BWW4 MCF2L2-201ENST00000328913 4980 ntAPPRIS P2 TSL 5 BASIC13.5□□□□□ -0.25
SSBP3Q9BWW4 SLC5A2-201ENST00000330498 2271 ntAPPRIS P1 TSL 1 (best) BASIC13.5□□□□□ -0.25
SSBP3Q9BWW4 MAP3K3-202ENST00000361733 3529 ntAPPRIS P3 TSL 1 (best) BASIC13.5□□□□□ -0.25
SSBP3Q9BWW4 SUV39H1-202ENST00000376687 2871 ntAPPRIS P1 TSL 1 (best) BASIC13.5□□□□□ -0.25
SSBP3Q9BWW4 PTPRN2-201ENST00000389413 4723 ntTSL 1 (best) BASIC13.49□□□□□ -0.25
SSBP3Q9BWW4 CETN4P-206ENST00000642099 2168 ntBASIC13.49□□□□□ -0.25
SSBP3Q9BWW4 EHD3-201ENST00000322054 4636 ntAPPRIS P1 TSL 1 (best) BASIC13.49□□□□□ -0.25
SSBP3Q9BWW4 JADE2-201ENST00000282605 2748 ntAPPRIS P1 TSL 2 BASIC13.49□□□□□ -0.25
SSBP3Q9BWW4 SH2B3-202ENST00000538307 2062 ntTSL 2 BASIC13.49□□□□□ -0.25
SSBP3Q9BWW4 SOWAHB-201ENST00000334306 3220 ntAPPRIS P1 BASIC13.49□□□□□ -0.25
SSBP3Q9BWW4 WDR45B-201ENST00000392325 2587 ntAPPRIS P1 TSL 1 (best) BASIC13.49□□□□□ -0.25
SSBP3Q9BWW4 FAM53B-202ENST00000337318 5431 ntAPPRIS P1 TSL 1 (best) BASIC13.49□□□□□ -0.25
SSBP3Q9BWW4 TUBB8-201ENST00000561967 1413 ntTSL 5 BASIC13.49□□□□□ -0.25
SSBP3Q9BWW4 GALNT18-201ENST00000227756 2504 ntAPPRIS P1 TSL 1 (best) BASIC13.49□□□□□ -0.25
SSBP3Q9BWW4 SYDE1-204ENST00000600440 3058 ntTSL 1 (best) BASIC13.49□□□□□ -0.25
SSBP3Q9BWW4 CSNK1A1L-201ENST00000379800 2406 ntAPPRIS P1 BASIC13.49□□□□□ -0.25
SSBP3Q9BWW4 SLC6A8-204ENST00000430077 1892 ntTSL 2 BASIC13.49□□□□□ -0.25
SSBP3Q9BWW4 WBP2-204ENST00000585462 1895 ntTSL 3 BASIC13.49□□□□□ -0.25
SSBP3Q9BWW4 CARD10-201ENST00000251973 3934 ntAPPRIS P1 TSL 1 (best) BASIC13.49□□□□□ -0.25
SSBP3Q9BWW4 RPS19-201ENST00000221975 500 ntTSL 3 BASIC13.49□□□□□ -0.25
SSBP3Q9BWW4 MRPL2-201ENST00000230413 899 ntTSL 2 BASIC13.49□□□□□ -0.25
SSBP3Q9BWW4 PAGE5-201ENST00000289619 741 ntAPPRIS P3 TSL 1 (best) BASIC13.49□□□□□ -0.25
SSBP3Q9BWW4 CXCL12-206ENST00000395795 404 ntTSL 5 BASIC13.49□□□□□ -0.25
SSBP3Q9BWW4 AL365255.1-202ENST00000413887 363 ntTSL 5 BASIC13.49□□□□□ -0.25
SSBP3Q9BWW4 AC007388.1-210ENST00000415640 458 ntTSL 3 BASIC13.49□□□□□ -0.25
SSBP3Q9BWW4 AC062015.1-201ENST00000423838 1134 ntTSL 1 (best) BASIC13.49□□□□□ -0.25
SSBP3Q9BWW4 IQCF3-201ENST00000437810 1270 ntAPPRIS P1 TSL 1 (best) BASIC13.49□□□□□ -0.25
SSBP3Q9BWW4 FOLR3-201ENST00000442948 805 ntTSL 5 BASIC13.49□□□□□ -0.25
SSBP3Q9BWW4 SNX21-206ENST00000462307 1043 ntTSL 1 (best) BASIC13.49□□□□□ -0.25
SSBP3Q9BWW4 CALML4-206ENST00000467889 987 ntAPPRIS P1 TSL 1 (best) BASIC13.49□□□□□ -0.25
SSBP3Q9BWW4 SATB1-217ENST00000493952 626 ntTSL 3 BASIC13.49□□□□□ -0.25
SSBP3Q9BWW4 CSRP2-202ENST00000546966 754 ntAPPRIS P1 TSL 3 BASIC13.49□□□□□ -0.25
SSBP3Q9BWW4 AC012173.1-201ENST00000567942 430 ntTSL 3 BASIC13.49□□□□□ -0.25
SSBP3Q9BWW4 RPS19-202ENST00000593863 526 ntAPPRIS P1 TSL 3 BASIC13.49□□□□□ -0.25
SSBP3Q9BWW4 HAUS2-211ENST00000639412 375 ntTSL 2 BASIC13.49□□□□□ -0.25
SSBP3Q9BWW4 SYT1-201ENST00000261205 4808 ntAPPRIS P3 TSL 1 (best) BASIC13.49□□□□□ -0.25
SSBP3Q9BWW4 CDC42EP4-201ENST00000335793 3272 ntAPPRIS P1 TSL 1 (best) BASIC13.49□□□□□ -0.25
SSBP3Q9BWW4 CXCL6-201ENST00000226317 1718 ntAPPRIS P2 TSL 1 (best) BASIC13.49□□□□□ -0.25
SSBP3Q9BWW4 NFIC-203ENST00000443272 1716 ntAPPRIS P1 TSL 2 BASIC13.49□□□□□ -0.25
SSBP3Q9BWW4 NFIX-210ENST00000588228 1692 ntTSL 2 BASIC13.49□□□□□ -0.25
SSBP3Q9BWW4 ZNF767P-201ENST00000463567 3520 ntTSL 2 BASIC13.49□□□□□ -0.25
SSBP3Q9BWW4 PGBD5-201ENST00000391860 10961 ntAPPRIS P1 TSL 1 (best) BASIC13.49□□□□□ -0.25
SSBP3Q9BWW4 SLIT3-201ENST00000332966 4895 ntAPPRIS ALT2 TSL 1 (best) BASIC13.49□□□□□ -0.25
SSBP3Q9BWW4 SH3YL1-206ENST00000405430 2064 ntAPPRIS P1 TSL 5 BASIC13.49□□□□□ -0.25
SSBP3Q9BWW4 TRIM9-202ENST00000338969 3312 ntTSL 2 BASIC13.49□□□□□ -0.25
SSBP3Q9BWW4 DOK5-201ENST00000262593 1963 ntAPPRIS P1 TSL 1 (best) BASIC13.49□□□□□ -0.25
SSBP3Q9BWW4 PSEN2-211ENST00000626989 1972 ntTSL 5 BASIC13.49□□□□□ -0.25
SSBP3Q9BWW4 PGR-209ENST00000617858 2816 ntTSL 5 BASIC13.49□□□□□ -0.25
SSBP3Q9BWW4 SIN3B-206ENST00000595541 2767 ntTSL 2 BASIC13.49□□□□□ -0.25
SSBP3Q9BWW4 NUCKS1-201ENST00000367142 6496 ntAPPRIS P1 TSL 1 (best) BASIC13.48□□□□□ -0.25
SSBP3Q9BWW4 MCF2L2-208ENST00000473233 4748 ntAPPRIS ALT2 TSL 5 BASIC13.48□□□□□ -0.25
SSBP3Q9BWW4 MAP4-202ENST00000360240 5142 ntAPPRIS P3 TSL 1 (best) BASIC13.48□□□□□ -0.25
SSBP3Q9BWW4 TOM1L2-209ENST00000540946 1420 ntTSL 2 BASIC13.48□□□□□ -0.25
SSBP3Q9BWW4 CD1E-213ENST00000444681 1820 ntAPPRIS ALT2 TSL 1 (best) BASIC13.48□□□□□ -0.25
SSBP3Q9BWW4 RELA-227ENST00000615805 2236 ntTSL 5 BASIC13.48□□□□□ -0.25
SSBP3Q9BWW4 FAM222B-211ENST00000582266 2613 ntTSL 1 (best) BASIC13.48□□□□□ -0.25
SSBP3Q9BWW4 ACSL6-201ENST00000296869 2561 ntTSL 5 BASIC13.48□□□□□ -0.25
SSBP3Q9BWW4 MAP3K20-203ENST00000409176 2572 ntAPPRIS P1 TSL 1 (best) BASIC13.48□□□□□ -0.25
SSBP3Q9BWW4 PCM1-206ENST00000518537 2171 ntTSL 1 (best) BASIC13.48□□□□□ -0.25
Retrieved 100 of 98,524 protein–RNA pairs in 54.9 ms