Protein–RNA interactions for Protein: Q9BT76

UPK3B, Uroplakin-3b, humanhuman

Predictions only

Length 320 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
UPK3BQ9BT76 GATD1-206ENST00000526325 756 ntTSL 5 BASIC11.31□□□□□ -0.6
UPK3BQ9BT76 ZNF576-206ENST00000533118 867 ntAPPRIS P1 TSL 2 BASIC11.31□□□□□ -0.6
UPK3BQ9BT76 SLC25A39P2-201ENST00000537614 270 ntBASIC11.31□□□□□ -0.6
UPK3BQ9BT76 AC069262.1-201ENST00000539058 672 ntBASIC11.31□□□□□ -0.6
UPK3BQ9BT76 RPL28-205ENST00000558131 444 ntTSL 5 BASIC11.31□□□□□ -0.6
UPK3BQ9BT76 KF456478.1-201ENST00000585980 472 ntTSL 3 BASIC11.31□□□□□ -0.6
UPK3BQ9BT76 AL355385.1-201ENST00000606123 409 ntBASIC11.31□□□□□ -0.6
UPK3BQ9BT76 AC243571.2-201ENST00000615265 628 ntTSL 3 BASIC11.31□□□□□ -0.6
UPK3BQ9BT76 GOLGA2-215ENST00000639983 1038 ntTSL 1 (best) BASIC11.31□□□□□ -0.6
UPK3BQ9BT76 SIN3B-202ENST00000379803 5129 ntAPPRIS P3 TSL 1 (best) BASIC11.31□□□□□ -0.6
UPK3BQ9BT76 DCLK2-201ENST00000296550 4265 ntAPPRIS P3 TSL 1 (best) BASIC11.31□□□□□ -0.6
UPK3BQ9BT76 SLC52A1-202ENST00000424747 2412 ntAPPRIS P1 TSL 1 (best) BASIC11.31□□□□□ -0.6
UPK3BQ9BT76 CHAD-201ENST00000258969 1739 ntAPPRIS P1 TSL 1 (best) BASIC11.31□□□□□ -0.6
UPK3BQ9BT76 ANKRD24-206ENST00000600132 4026 ntAPPRIS P2 TSL 5 BASIC11.31□□□□□ -0.6
UPK3BQ9BT76 PLEKHA2-208ENST00000616927 1748 ntTSL 5 BASIC11.31□□□□□ -0.6
UPK3BQ9BT76 PHGDH-202ENST00000369409 1882 ntTSL 1 (best) BASIC11.31□□□□□ -0.6
UPK3BQ9BT76 AC060834.1-201ENST00000443027 2032 ntBASIC11.31□□□□□ -0.6
UPK3BQ9BT76 RSPH6A-201ENST00000221538 2456 ntAPPRIS P2 TSL 1 (best) BASIC11.31□□□□□ -0.6
UPK3BQ9BT76 TRMT44-201ENST00000389737 2799 ntAPPRIS P2 TSL 5 BASIC11.31□□□□□ -0.6
UPK3BQ9BT76 RIMS3-202ENST00000372684 7235 ntAPPRIS P1 TSL 1 (best) BASIC11.31□□□□□ -0.6
UPK3BQ9BT76 GUCD1-203ENST00000404664 1606 ntTSL 2 BASIC11.31□□□□□ -0.6
UPK3BQ9BT76 GJB3-201ENST00000373362 1797 ntAPPRIS P1 TSL 1 (best) BASIC11.31□□□□□ -0.6
UPK3BQ9BT76 JHDM1D-AS1-201ENST00000566699 2380 ntBASIC11.31□□□□□ -0.6
UPK3BQ9BT76 HBP1-201ENST00000222574 2829 ntAPPRIS P1 TSL 1 (best) BASIC11.31□□□□□ -0.6
UPK3BQ9BT76 LENG8-209ENST00000616932 2825 ntAPPRIS ALT2 TSL 5 BASIC11.31□□□□□ -0.6
UPK3BQ9BT76 MYB-201ENST00000316528 3571 ntTSL 5 BASIC11.31□□□□□ -0.6
UPK3BQ9BT76 MYB-241ENST00000616088 3573 ntTSL 5 BASIC11.31□□□□□ -0.6
UPK3BQ9BT76 SHH-201ENST00000297261 4454 ntAPPRIS P1 TSL 1 (best) BASIC11.31□□□□□ -0.6
UPK3BQ9BT76 ADAMTS15-201ENST00000299164 5673 ntAPPRIS P1 TSL 1 (best) BASIC11.31□□□□□ -0.6
UPK3BQ9BT76 BCAR1-206ENST00000535626 2894 ntTSL 2 BASIC11.3□□□□□ -0.6
UPK3BQ9BT76 ASL-201ENST00000304874 2143 ntAPPRIS P1 TSL 1 (best) BASIC11.3□□□□□ -0.6
UPK3BQ9BT76 SLC39A6-202ENST00000440549 1657 ntAPPRIS ALT2 TSL 1 (best) BASIC11.3□□□□□ -0.6
UPK3BQ9BT76 GABRD-218ENST00000640949 1684 ntTSL 5 BASIC11.3□□□□□ -0.6
UPK3BQ9BT76 MARCH4-201ENST00000273067 4447 ntAPPRIS P1 TSL 1 (best) BASIC11.3□□□□□ -0.6
UPK3BQ9BT76 UNC13A-204ENST00000550896 5200 ntAPPRIS ALT2 TSL 5 BASIC11.3□□□□□ -0.6
UPK3BQ9BT76 ARHGEF4-206ENST00000428230 2172 ntTSL 5 BASIC11.3□□□□□ -0.6
UPK3BQ9BT76 NDUFA11-205ENST00000592634 2154 ntTSL 2 BASIC11.3□□□□□ -0.6
UPK3BQ9BT76 IGSF8-205ENST00000614243 2191 ntAPPRIS P2 TSL 1 (best) BASIC11.3□□□□□ -0.6
UPK3BQ9BT76 PLPPR4-203ENST00000457765 4846 ntTSL 2 BASIC11.3□□□□□ -0.6
UPK3BQ9BT76 STK32C-204ENST00000368622 2010 ntTSL 1 (best) BASIC11.3□□□□□ -0.6
UPK3BQ9BT76 TMEM57-202ENST00000399766 3294 ntTSL 1 (best) BASIC11.3□□□□□ -0.6
UPK3BQ9BT76 SLC39A8-201ENST00000356736 3144 ntAPPRIS P1 TSL 1 (best) BASIC11.3□□□□□ -0.6
UPK3BQ9BT76 DOCK7-203ENST00000404627 2678 ntTSL 2 BASIC11.3□□□□□ -0.6
UPK3BQ9BT76 HOXA10-202ENST00000396344 1570 ntAPPRIS ALT1 TSL 1 (best) BASIC11.3□□□□□ -0.6
UPK3BQ9BT76 AC006538.1-201ENST00000567905 1585 ntBASIC11.3□□□□□ -0.6
UPK3BQ9BT76 XRCC3-209ENST00000554913 2539 ntAPPRIS P1 TSL 2 BASIC11.3□□□□□ -0.6
UPK3BQ9BT76 LRP8-202ENST00000347547 2382 ntTSL 1 (best) BASIC11.3□□□□□ -0.6
UPK3BQ9BT76 MAPK13-203ENST00000373766 6196 ntTSL 1 (best) BASIC11.3□□□□□ -0.6
UPK3BQ9BT76 TET2-207ENST00000513237 10166 ntAPPRIS ALT2 TSL 1 (best) BASIC11.3□□□□□ -0.6
UPK3BQ9BT76 TET2-209ENST00000540549 10166 ntAPPRIS P2 TSL 1 (best) BASIC11.3□□□□□ -0.6
UPK3BQ9BT76 ZNF618-203ENST00000374126 3018 ntAPPRIS ALT2 TSL 1 (best) BASIC11.3□□□□□ -0.6
UPK3BQ9BT76 CABP2-201ENST00000294288 925 ntTSL 1 (best) BASIC11.3□□□□□ -0.6
UPK3BQ9BT76 TMEM270-201ENST00000320531 854 ntAPPRIS P1 TSL 1 (best) BASIC11.3□□□□□ -0.6
UPK3BQ9BT76 FBXO44-205ENST00000376768 959 ntTSL 2 BASIC11.3□□□□□ -0.6
UPK3BQ9BT76 SLBP-205ENST00000488267 987 ntTSL 2 BASIC11.3□□□□□ -0.6
UPK3BQ9BT76 PMF1-BGLAP-203ENST00000490491 1007 ntAPPRIS P1 TSL 2 BASIC11.3□□□□□ -0.6
UPK3BQ9BT76 ALG1L8P-201ENST00000533887 760 ntBASIC11.3□□□□□ -0.6
UPK3BQ9BT76 GMFG-207ENST00000598034 1028 ntAPPRIS ALT1 TSL 1 (best) BASIC11.3□□□□□ -0.6
UPK3BQ9BT76 CBY1-211ENST00000619293 1118 ntTSL 5 BASIC11.3□□□□□ -0.6
UPK3BQ9BT76 AC244153.1-203ENST00000622796 419 ntTSL 2 BASIC11.3□□□□□ -0.6
UPK3BQ9BT76 AC092811.2-201ENST00000632561 559 ntTSL 4 BASIC11.3□□□□□ -0.6
UPK3BQ9BT76 LARP6-201ENST00000299213 4469 ntAPPRIS P1 TSL 1 (best) BASIC11.3□□□□□ -0.6
UPK3BQ9BT76 MITF-204ENST00000352241 4814 ntAPPRIS ALT1 TSL 1 (best) BASIC11.3□□□□□ -0.6
UPK3BQ9BT76 SQOR-208ENST00000568606 1792 ntAPPRIS P1 TSL 5 BASIC11.3□□□□□ -0.6
UPK3BQ9BT76 SPAG9-201ENST00000262013 8273 ntTSL 1 (best) BASIC11.3□□□□□ -0.6
UPK3BQ9BT76 CD1D-201ENST00000368171 2253 ntAPPRIS P1 TSL 1 (best) BASIC11.3□□□□□ -0.6
UPK3BQ9BT76 MIEF1-202ENST00000402881 2269 ntTSL 1 (best) BASIC11.3□□□□□ -0.6
UPK3BQ9BT76 AL645728.1-201ENST00000366221 2101 ntBASIC11.3□□□□□ -0.6
UPK3BQ9BT76 OGFOD2-224ENST00000545612 1465 ntTSL 2 BASIC11.3□□□□□ -0.6
UPK3BQ9BT76 PITPNM3-201ENST00000262483 7086 ntAPPRIS P3 TSL 1 (best) BASIC11.3□□□□□ -0.6
UPK3BQ9BT76 HOXB6-203ENST00000484302 1960 ntAPPRIS P1 TSL 2 BASIC11.3□□□□□ -0.6
UPK3BQ9BT76 TNKS-211ENST00000520408 1964 ntTSL 2 BASIC11.3□□□□□ -0.6
UPK3BQ9BT76 EPS15L1-207ENST00000594975 2489 ntTSL 2 BASIC11.3□□□□□ -0.6
UPK3BQ9BT76 PTPRC-206ENST00000413409 1338 ntTSL 1 (best) BASIC11.3□□□□□ -0.6
UPK3BQ9BT76 AL671710.1-201ENST00000610245 2349 ntBASIC11.3□□□□□ -0.6
UPK3BQ9BT76 LINGO1-204ENST00000561030 2677 ntTSL 1 (best) BASIC11.3□□□□□ -0.6
UPK3BQ9BT76 CLDN11-201ENST00000064724 2169 ntAPPRIS P1 TSL 1 (best) BASIC11.3□□□□□ -0.6
UPK3BQ9BT76 CPSF4-201ENST00000292476 1691 ntAPPRIS P3 TSL 1 (best) BASIC11.3□□□□□ -0.6
UPK3BQ9BT76 C10orf107-201ENST00000330194 1685 ntAPPRIS P2 TSL 1 (best) BASIC11.3□□□□□ -0.6
UPK3BQ9BT76 SH2D2A-202ENST00000368199 1658 ntAPPRIS P3 TSL 1 (best) BASIC11.3□□□□□ -0.6
UPK3BQ9BT76 SSBP3-205ENST00000417664 1666 ntTSL 5 BASIC11.3□□□□□ -0.6
UPK3BQ9BT76 CCNA1-203ENST00000625767 1699 ntTSL 1 (best) BASIC11.3□□□□□ -0.6
UPK3BQ9BT76 ABLIM2-203ENST00000361737 3396 ntAPPRIS ALT2 TSL 2 BASIC11.3□□□□□ -0.6
UPK3BQ9BT76 SHQ1-201ENST00000325599 2879 ntAPPRIS P1 TSL 1 (best) BASIC11.3□□□□□ -0.6
UPK3BQ9BT76 SDCBP2-202ENST00000360779 1519 ntAPPRIS P1 TSL 1 (best) BASIC11.3□□□□□ -0.6
UPK3BQ9BT76 GOLGA2P2Y-202ENST00000423852 1506 ntBASIC11.3□□□□□ -0.6
UPK3BQ9BT76 PPM1A-203ENST00000395076 8184 ntAPPRIS P1 TSL 1 (best) BASIC11.29□□□□□ -0.6
UPK3BQ9BT76 CNOT8-204ENST00000517876 2708 ntAPPRIS P1 TSL 5 BASIC11.29□□□□□ -0.6
UPK3BQ9BT76 AC105020.1-201ENST00000435356 2205 ntBASIC11.29□□□□□ -0.6
UPK3BQ9BT76 KIAA1211-201ENST00000264229 4109 ntAPPRIS P2 TSL 2 BASIC11.29□□□□□ -0.6
UPK3BQ9BT76 NTRK3-202ENST00000355254 2938 ntAPPRIS ALT2 TSL 5 BASIC11.29□□□□□ -0.6
UPK3BQ9BT76 KMT2E-201ENST00000257745 6714 ntAPPRIS P1 TSL 1 (best) BASIC11.29□□□□□ -0.6
UPK3BQ9BT76 KANK2-201ENST00000586659 5162 ntAPPRIS P3 TSL 1 (best) BASIC11.29□□□□□ -0.6
UPK3BQ9BT76 LMF1-201ENST00000262301 2621 ntAPPRIS P1 TSL 5 BASIC11.29□□□□□ -0.6
UPK3BQ9BT76 PNO1-201ENST00000263657 2286 ntAPPRIS P1 TSL 1 (best) BASIC11.29□□□□□ -0.6
UPK3BQ9BT76 MAPRE1-201ENST00000375571 2623 ntAPPRIS P1 TSL 1 (best) BASIC11.29□□□□□ -0.6
UPK3BQ9BT76 CSF1-204ENST00000369802 2484 ntAPPRIS P1 TSL 1 (best) BASIC11.29□□□□□ -0.6
UPK3BQ9BT76 PAQR6-204ENST00000356983 2143 ntAPPRIS ALT1 TSL 2 BASIC11.29□□□□□ -0.6
UPK3BQ9BT76 STARD7-201ENST00000337288 3368 ntAPPRIS P1 TSL 1 (best) BASIC11.29□□□□□ -0.6
UPK3BQ9BT76 IGFBP5-201ENST00000233813 6215 ntAPPRIS P1 TSL 1 (best) BASIC11.29□□□□□ -0.6
Retrieved 100 of 98,524 protein–RNA pairs in 33.6 ms