Protein–RNA interactions for Protein: Q8WXC6

COPS9, COP9 signalosome complex subunit 9, humanhuman

Predictions only

Length 57 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COPS9Q8WXC6 KRT85-201ENST00000257901 2447 ntAPPRIS P1 TSL 1 (best) BASIC10.94□□□□□ -0.66
COPS9Q8WXC6 SPDEF-202ENST00000544425 1866 ntAPPRIS ALT1 TSL 2 BASIC10.94□□□□□ -0.66
COPS9Q8WXC6 ATP6AP2-217ENST00000636580 2337 ntAPPRIS P2 TSL 1 (best) BASIC10.94□□□□□ -0.66
COPS9Q8WXC6 CYB561D2-201ENST00000232508 1225 ntAPPRIS P1 TSL 1 (best) BASIC10.94□□□□□ -0.66
COPS9Q8WXC6 VCY1B-201ENST00000250823 550 ntAPPRIS P1 TSL 1 (best) BASIC10.94□□□□□ -0.66
COPS9Q8WXC6 VCY-201ENST00000250825 550 ntAPPRIS P1 TSL 1 (best) BASIC10.94□□□□□ -0.66
COPS9Q8WXC6 TSPY14P-201ENST00000303979 915 ntBASIC10.94□□□□□ -0.66
COPS9Q8WXC6 KCNK7-202ENST00000342202 1283 ntTSL 1 (best) BASIC10.94□□□□□ -0.66
COPS9Q8WXC6 ACVR1C-203ENST00000348328 1270 ntTSL 1 (best) BASIC10.94□□□□□ -0.66
COPS9Q8WXC6 Telomerase-vert.1-201ENST00000363312 438 ntBASIC10.94□□□□□ -0.66
COPS9Q8WXC6 PSMA7-201ENST00000370858 925 ntTSL 2 BASIC10.94□□□□□ -0.66
COPS9Q8WXC6 PSMA7-203ENST00000370873 996 ntAPPRIS P1 TSL 1 (best) BASIC10.94□□□□□ -0.66
COPS9Q8WXC6 DAB1-202ENST00000371230 1150 ntTSL 5 BASIC10.94□□□□□ -0.66
COPS9Q8WXC6 TRA2B-203ENST00000382191 976 ntTSL 2 BASIC10.94□□□□□ -0.66
COPS9Q8WXC6 NAA60-204ENST00000421765 1045 ntTSL 2 BASIC10.94□□□□□ -0.66
COPS9Q8WXC6 MAGI2-AS3-211ENST00000451809 707 ntTSL 3 BASIC10.94□□□□□ -0.66
COPS9Q8WXC6 AC104596.1-202ENST00000507486 759 ntTSL 3 BASIC10.94□□□□□ -0.66
COPS9Q8WXC6 AL356805.1-201ENST00000556383 341 ntTSL 3 BASIC10.94□□□□□ -0.66
COPS9Q8WXC6 IRX5-204ENST00000560154 879 ntTSL 5 BASIC10.94□□□□□ -0.66
COPS9Q8WXC6 LINC02167-201ENST00000562769 594 ntTSL 3 BASIC10.94□□□□□ -0.66
COPS9Q8WXC6 TMEM249-203ENST00000565365 975 ntAPPRIS P2 TSL 3 BASIC10.94□□□□□ -0.66
COPS9Q8WXC6 AC006058.3-201ENST00000606217 1069 ntBASIC10.94□□□□□ -0.66
COPS9Q8WXC6 PHOSPHO2-207ENST00000616524 1253 ntAPPRIS P1 TSL 3 BASIC10.94□□□□□ -0.66
COPS9Q8WXC6 PHOSPHO2-208ENST00000617738 1053 ntAPPRIS P1 TSL 2 BASIC10.94□□□□□ -0.66
COPS9Q8WXC6 IRX5-205ENST00000620085 881 ntTSL 1 (best) BASIC10.94□□□□□ -0.66
COPS9Q8WXC6 SLFNL1-AS1-201ENST00000626479 4800 ntTSL 1 (best) BASIC10.94□□□□□ -0.66
COPS9Q8WXC6 GPI-205ENST00000586425 1799 ntTSL 5 BASIC10.94□□□□□ -0.66
COPS9Q8WXC6 TGM6-201ENST00000202625 2292 ntAPPRIS P1 TSL 1 (best) BASIC10.94□□□□□ -0.66
COPS9Q8WXC6 DHX40-202ENST00000425628 2255 ntTSL 2 BASIC10.94□□□□□ -0.66
COPS9Q8WXC6 TEN1-CDK3-202ENST00000569284 3287 ntAPPRIS P1 TSL 2 BASIC10.94□□□□□ -0.66
COPS9Q8WXC6 KDM5B-203ENST00000367265 10345 ntAPPRIS P1 TSL 1 (best) BASIC10.94□□□□□ -0.66
COPS9Q8WXC6 AC009242.1-201ENST00000634300 2706 ntTSL 5 BASIC10.94□□□□□ -0.66
COPS9Q8WXC6 HSPA12B-201ENST00000254963 3151 ntAPPRIS P1 TSL 1 (best) BASIC10.94□□□□□ -0.66
COPS9Q8WXC6 PDE1B-207ENST00000550620 2150 ntTSL 1 (best) BASIC10.94□□□□□ -0.66
COPS9Q8WXC6 COLQ-206ENST00000603808 1668 ntAPPRIS ALT1 TSL 1 (best) BASIC10.94□□□□□ -0.66
COPS9Q8WXC6 FMO5-201ENST00000254090 2632 ntAPPRIS P1 TSL 1 (best) BASIC10.94□□□□□ -0.66
COPS9Q8WXC6 ATG9A-205ENST00000409618 4025 ntAPPRIS P1 TSL 5 BASIC10.94□□□□□ -0.66
COPS9Q8WXC6 PPIL6-202ENST00000424445 4031 ntTSL 5 BASIC10.94□□□□□ -0.66
COPS9Q8WXC6 CPT2-201ENST00000371486 3094 ntAPPRIS P1 TSL 1 (best) BASIC10.94□□□□□ -0.66
COPS9Q8WXC6 HSPA12A-205ENST00000635765 5841 ntAPPRIS ALT2 TSL 5 BASIC10.94□□□□□ -0.66
COPS9Q8WXC6 MKS1-204ENST00000537529 2083 ntTSL 1 (best) BASIC10.94□□□□□ -0.66
COPS9Q8WXC6 AC232323.1-201ENST00000540724 2099 ntBASIC10.94□□□□□ -0.66
COPS9Q8WXC6 REXO1L5P-201ENST00000622260 2098 ntBASIC10.94□□□□□ -0.66
COPS9Q8WXC6 TRPV4-204ENST00000536838 2514 ntTSL 1 (best) BASIC10.94□□□□□ -0.66
COPS9Q8WXC6 ITFG1-201ENST00000320640 3400 ntAPPRIS P1 TSL 1 (best) BASIC10.94□□□□□ -0.66
COPS9Q8WXC6 FAM225A-202ENST00000453010 5625 ntTSL 1 (best) BASIC10.94□□□□□ -0.66
COPS9Q8WXC6 CEP78-203ENST00000376598 2404 ntAPPRIS ALT2 TSL 5 BASIC10.94□□□□□ -0.66
COPS9Q8WXC6 RSRP1-202ENST00000431849 1954 ntAPPRIS ALT2 TSL 1 (best) BASIC10.94□□□□□ -0.66
COPS9Q8WXC6 SLC18A1-207ENST00000519026 1980 ntTSL 5 BASIC10.94□□□□□ -0.66
COPS9Q8WXC6 CLCN2-201ENST00000265593 3290 ntAPPRIS P3 TSL 1 (best) BASIC10.94□□□□□ -0.66
COPS9Q8WXC6 PLPP3-201ENST00000371250 3292 ntAPPRIS P1 TSL 1 (best) BASIC10.94□□□□□ -0.66
COPS9Q8WXC6 USP22-206ENST00000537526 4976 ntAPPRIS ALT2 TSL 1 (best) BASIC10.94□□□□□ -0.66
COPS9Q8WXC6 PDK2-201ENST00000007708 2384 ntTSL 2 BASIC10.94□□□□□ -0.66
COPS9Q8WXC6 SGK2-206ENST00000423407 1915 ntAPPRIS P1 TSL 1 (best) BASIC10.94□□□□□ -0.66
COPS9Q8WXC6 SH2B1-206ENST00000545570 1488 ntTSL 2 BASIC10.93□□□□□ -0.66
COPS9Q8WXC6 SLC29A1-203ENST00000371724 2275 ntAPPRIS P1 TSL 5 BASIC10.93□□□□□ -0.66
COPS9Q8WXC6 CDC42-203ENST00000400259 2274 ntAPPRIS ALT1 TSL 5 BASIC10.93□□□□□ -0.66
COPS9Q8WXC6 ITSN1-210ENST00000399353 3913 ntTSL 1 (best) BASIC10.93□□□□□ -0.66
COPS9Q8WXC6 AC007614.5-201ENST00000623424 8892 ntBASIC10.93□□□□□ -0.66
COPS9Q8WXC6 SPHK2-210ENST00000599748 2683 ntAPPRIS ALT2 TSL 1 (best) BASIC10.93□□□□□ -0.66
COPS9Q8WXC6 LAT-204ENST00000395461 1448 ntAPPRIS ALT2 TSL 1 (best) BASIC10.93□□□□□ -0.66
COPS9Q8WXC6 RPS23-201ENST00000296674 3437 ntAPPRIS P1 TSL 1 (best) BASIC10.93□□□□□ -0.66
COPS9Q8WXC6 SFRP4-201ENST00000436072 2966 ntAPPRIS P1 TSL 1 (best) BASIC10.93□□□□□ -0.66
COPS9Q8WXC6 LINC00528-201ENST00000600723 2160 ntBASIC10.93□□□□□ -0.66
COPS9Q8WXC6 AP000704.1-201ENST00000637940 2182 ntTSL 5 BASIC10.93□□□□□ -0.66
COPS9Q8WXC6 BTRC-202ENST00000370187 6134 ntAPPRIS P4 TSL 1 (best) BASIC10.93□□□□□ -0.66
COPS9Q8WXC6 PDCD5-203ENST00000419343 1799 ntTSL 2 BASIC10.93□□□□□ -0.66
COPS9Q8WXC6 HMOX2-205ENST00000458134 1797 ntAPPRIS P1 TSL 5 BASIC10.93□□□□□ -0.66
COPS9Q8WXC6 ZBED1-202ENST00000381222 4507 ntAPPRIS P1 TSL 1 (best) BASIC10.93□□□□□ -0.66
COPS9Q8WXC6 CLEC4G-201ENST00000328853 1360 ntAPPRIS P1 TSL 1 (best) BASIC10.93□□□□□ -0.66
COPS9Q8WXC6 AGPAT2-201ENST00000371694 1391 ntTSL 1 (best) BASIC10.93□□□□□ -0.66
COPS9Q8WXC6 TOP3BP1-201ENST00000420768 1380 ntBASIC10.93□□□□□ -0.66
COPS9Q8WXC6 KCNH1-214ENST00000640566 1365 ntTSL 1 (best) BASIC10.93□□□□□ -0.66
COPS9Q8WXC6 CDK2-204ENST00000553376 1725 ntTSL 5 BASIC10.93□□□□□ -0.66
COPS9Q8WXC6 RIPOR3-202ENST00000327979 4377 ntAPPRIS P1 TSL 2 BASIC10.93□□□□□ -0.66
COPS9Q8WXC6 GJA8-201ENST00000369235 1302 ntAPPRIS P1 BASIC10.93□□□□□ -0.66
COPS9Q8WXC6 BCAR3-201ENST00000260502 3171 ntAPPRIS P1 TSL 1 (best) BASIC10.93□□□□□ -0.66
COPS9Q8WXC6 TMPRSS3-204ENST00000433957 2403 ntAPPRIS ALT1 TSL 1 (best) BASIC10.93□□□□□ -0.66
COPS9Q8WXC6 CCDC181-206ENST00000491570 1652 ntTSL 2 BASIC10.93□□□□□ -0.66
COPS9Q8WXC6 ICE1-201ENST00000296564 7927 ntAPPRIS P2 TSL 1 (best) BASIC10.93□□□□□ -0.66
COPS9Q8WXC6 TFAP2A-201ENST00000319516 2035 ntTSL 5 BASIC10.93□□□□□ -0.66
COPS9Q8WXC6 IPO13-201ENST00000372339 1201 ntTSL 2 BASIC10.93□□□□□ -0.66
COPS9Q8WXC6 ERICH4-201ENST00000378187 946 ntAPPRIS P1 TSL 5 BASIC10.93□□□□□ -0.66
COPS9Q8WXC6 TBC1D7-205ENST00000379307 1084 ntTSL 1 (best) BASIC10.93□□□□□ -0.66
COPS9Q8WXC6 NABP1-203ENST00000409510 843 ntTSL 5 BASIC10.93□□□□□ -0.66
COPS9Q8WXC6 MRPS24-203ENST00000418740 743 ntTSL 2 BASIC10.93□□□□□ -0.66
COPS9Q8WXC6 AC073050.1-201ENST00000442316 462 ntTSL 3 BASIC10.93□□□□□ -0.66
COPS9Q8WXC6 FAHD2CP-202ENST00000443258 893 ntTSL 3 BASIC10.93□□□□□ -0.66
COPS9Q8WXC6 TNFRSF1B-204ENST00000536782 557 ntTSL 1 (best) BASIC10.93□□□□□ -0.66
COPS9Q8WXC6 LINC01238-205ENST00000567549 1107 ntBASIC10.93□□□□□ -0.66
COPS9Q8WXC6 AC010531.6-201ENST00000602282 401 ntTSL 2 BASIC10.93□□□□□ -0.66
COPS9Q8WXC6 SLF2-205ENST00000609386 891 ntAPPRIS ALT2 BASIC10.93□□□□□ -0.66
COPS9Q8WXC6 AD001527.2-201ENST00000622994 785 ntBASIC10.93□□□□□ -0.66
COPS9Q8WXC6 NDUFAB1-201ENST00000007516 717 ntAPPRIS P1 TSL 1 (best) BASIC10.93□□□□□ -0.66
COPS9Q8WXC6 NOTO-201ENST00000398468 2749 ntAPPRIS P1 TSL 2 BASIC10.93□□□□□ -0.66
COPS9Q8WXC6 NSUN5-202ENST00000310326 1602 ntAPPRIS ALT2 TSL 2 BASIC10.93□□□□□ -0.66
COPS9Q8WXC6 MSI2-204ENST00000442934 1624 ntTSL 2 BASIC10.93□□□□□ -0.66
COPS9Q8WXC6 FNIP1-205ENST00000615660 6589 ntTSL 5 BASIC10.93□□□□□ -0.66
COPS9Q8WXC6 AAK1-202ENST00000409068 2606 ntTSL 2 BASIC10.93□□□□□ -0.66
COPS9Q8WXC6 AC008677.1-201ENST00000519230 1561 ntBASIC10.93□□□□□ -0.66
Retrieved 100 of 98,524 protein–RNA pairs in 73.8 ms