Protein–RNA interactions for Protein: Q6PCD5

RFWD3, E3 ubiquitin-protein ligase RFWD3, humanhuman

Predictions only

Length 774 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RFWD3Q6PCD5 NDUFA4L2-202ENST00000554503 1177 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
RFWD3Q6PCD5 RAB3D-202ENST00000589655 924 ntAPPRIS P1 TSL 2 BASIC16.85■□□□□ 0.29
RFWD3Q6PCD5 ERCC1-212ENST00000591636 836 ntTSL 2 BASIC16.85■□□□□ 0.29
RFWD3Q6PCD5 LAMTOR5-208ENST00000614544 846 ntTSL 1 (best) BASIC16.85■□□□□ 0.29
RFWD3Q6PCD5 CSNK1A1-202ENST00000377843 2559 ntAPPRIS ALT1 TSL 1 (best) BASIC16.85■□□□□ 0.29
RFWD3Q6PCD5 UCKL1-203ENST00000369908 1954 ntAPPRIS P1 TSL 2 BASIC16.85■□□□□ 0.29
RFWD3Q6PCD5 CLMAT3-201ENST00000510576 1973 ntTSL 1 (best) BASIC16.85■□□□□ 0.29
RFWD3Q6PCD5 GHDC-201ENST00000301671 2650 ntAPPRIS P1 TSL 2 BASIC16.85■□□□□ 0.29
RFWD3Q6PCD5 LINC00884-202ENST00000448892 2680 ntTSL 5 BASIC16.85■□□□□ 0.29
RFWD3Q6PCD5 PDZRN3-201ENST00000263666 4248 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
RFWD3Q6PCD5 ORMDL3-201ENST00000304046 2111 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
RFWD3Q6PCD5 HSD17B7P2-202ENST00000494540 1401 ntTSL 1 (best) BASIC16.85■□□□□ 0.29
RFWD3Q6PCD5 LONRF3-203ENST00000422289 2898 ntTSL 2 BASIC16.85■□□□□ 0.29
RFWD3Q6PCD5 AC092718.8-201ENST00000640345 2892 ntAPPRIS P1 TSL 5 BASIC16.85■□□□□ 0.29
RFWD3Q6PCD5 CYP46A1-201ENST00000261835 2181 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
RFWD3Q6PCD5 LONRF3-201ENST00000304778 2989 ntTSL 1 (best) BASIC16.85■□□□□ 0.29
RFWD3Q6PCD5 HHIPL1-201ENST00000330710 7390 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
RFWD3Q6PCD5 AL138694.1-201ENST00000637731 1689 ntAPPRIS P1 TSL 5 BASIC16.85■□□□□ 0.29
RFWD3Q6PCD5 MAP4K4-205ENST00000350878 7640 ntTSL 1 (best) BASIC16.85■□□□□ 0.29
RFWD3Q6PCD5 SAMM50-201ENST00000350028 1717 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
RFWD3Q6PCD5 MAP4K1-208ENST00000589130 2654 ntTSL 5 BASIC16.84■□□□□ 0.29
RFWD3Q6PCD5 SCP2-213ENST00000528311 1896 ntTSL 2 BASIC16.84■□□□□ 0.29
RFWD3Q6PCD5 LINC00094-205ENST00000603928 5722 ntAPPRIS ALT2 TSL 2 BASIC16.84■□□□□ 0.29
RFWD3Q6PCD5 PPP2R5D-202ENST00000394110 2894 ntTSL 1 (best) BASIC16.84■□□□□ 0.29
RFWD3Q6PCD5 MBD1-222ENST00000590208 2913 ntAPPRIS ALT2 TSL 1 (best) BASIC16.84■□□□□ 0.29
RFWD3Q6PCD5 INPP5K-204ENST00000421807 2988 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
RFWD3Q6PCD5 DACH1-203ENST00000619232 2986 ntAPPRIS ALT2 TSL 5 BASIC16.84■□□□□ 0.29
RFWD3Q6PCD5 TLCD2-201ENST00000330676 5971 ntAPPRIS P1 TSL 2 BASIC16.84■□□□□ 0.29
RFWD3Q6PCD5 AL365203.3-201ENST00000609742 2057 ntBASIC16.84■□□□□ 0.29
RFWD3Q6PCD5 FBXL5-201ENST00000341285 3385 ntAPPRIS P3 TSL 1 (best) BASIC16.84■□□□□ 0.29
RFWD3Q6PCD5 HIP1R-201ENST00000253083 4539 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
RFWD3Q6PCD5 C6orf52-202ENST00000379586 430 ntAPPRIS ALT2 TSL 2 BASIC16.84■□□□□ 0.29
RFWD3Q6PCD5 HFE-208ENST00000397022 1280 ntTSL 1 (best) BASIC16.84■□□□□ 0.29
RFWD3Q6PCD5 METTL21A-202ENST00000406927 1103 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
RFWD3Q6PCD5 RAB17-204ENST00000409822 1077 ntTSL 5 BASIC16.84■□□□□ 0.29
RFWD3Q6PCD5 HFE-214ENST00000488199 781 ntTSL 1 (best) BASIC16.84■□□□□ 0.29
RFWD3Q6PCD5 AC027243.1-201ENST00000559539 758 ntTSL 3 BASIC16.84■□□□□ 0.29
RFWD3Q6PCD5 AC140878.1-201ENST00000565277 250 ntBASIC16.84■□□□□ 0.29
RFWD3Q6PCD5 CLN3-246ENST00000636228 1224 ntTSL 1 (best) BASIC16.84■□□□□ 0.29
RFWD3Q6PCD5 JRK-203ENST00000571961 2687 ntAPPRIS ALT2 TSL 1 (best) BASIC16.84■□□□□ 0.29
RFWD3Q6PCD5 IER2-203ENST00000588173 2934 ntAPPRIS P1 BASIC16.84■□□□□ 0.29
RFWD3Q6PCD5 MED19-201ENST00000337672 1637 ntTSL 1 (best) BASIC16.84■□□□□ 0.29
RFWD3Q6PCD5 TMEM147-AS1-203ENST00000589137 1627 ntTSL 1 (best) BASIC16.84■□□□□ 0.29
RFWD3Q6PCD5 NFIC-203ENST00000443272 1716 ntAPPRIS P1 TSL 2 BASIC16.84■□□□□ 0.29
RFWD3Q6PCD5 TXNDC2-204ENST00000536353 1703 ntTSL 5 BASIC16.84■□□□□ 0.29
RFWD3Q6PCD5 BTNL9-201ENST00000327705 3500 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
RFWD3Q6PCD5 GPS1-208ENST00000578552 1874 ntAPPRIS ALT1 TSL 1 (best) BASIC16.84■□□□□ 0.29
RFWD3Q6PCD5 NAT9-210ENST00000580301 1860 ntTSL 1 (best) BASIC16.84■□□□□ 0.29
RFWD3Q6PCD5 SNAI2-201ENST00000020945 2010 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
RFWD3Q6PCD5 CASK-203ENST00000378163 4411 ntAPPRIS ALT1 TSL 5 BASIC16.84■□□□□ 0.29
RFWD3Q6PCD5 TCF25-201ENST00000263346 2233 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
RFWD3Q6PCD5 CLU-215ENST00000523500 2381 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
RFWD3Q6PCD5 INTS11-247ENST00000540437 2629 ntTSL 2 BASIC16.83■□□□□ 0.29
RFWD3Q6PCD5 CROCCP3-201ENST00000263511 5368 ntTSL 1 (best) BASIC16.83■□□□□ 0.29
RFWD3Q6PCD5 AC005064.1-201ENST00000422488 2725 ntTSL 1 (best) BASIC16.83■□□□□ 0.29
RFWD3Q6PCD5 KIF18B-204ENST00000593135 2745 ntAPPRIS P3 TSL 5 BASIC16.83■□□□□ 0.29
RFWD3Q6PCD5 MTA1-203ENST00000406191 2770 ntAPPRIS P5 TSL 2 BASIC16.83■□□□□ 0.29
RFWD3Q6PCD5 SLC9A7P1-201ENST00000554295 3311 ntBASIC16.83■□□□□ 0.29
RFWD3Q6PCD5 SNED1-202ENST00000342631 1930 ntTSL 1 (best) BASIC16.83■□□□□ 0.28
RFWD3Q6PCD5 ITSN2-201ENST00000355123 6300 ntAPPRIS P4 TSL 1 (best) BASIC16.83■□□□□ 0.28
RFWD3Q6PCD5 ANKRD2-203ENST00000370655 1451 ntTSL 1 (best) BASIC16.83■□□□□ 0.28
RFWD3Q6PCD5 CAP1-205ENST00000372802 2964 ntAPPRIS ALT1 TSL 5 BASIC16.83■□□□□ 0.28
RFWD3Q6PCD5 SLC2A13-202ENST00000380858 3082 ntTSL 1 (best) BASIC16.83■□□□□ 0.28
RFWD3Q6PCD5 SNX9-201ENST00000392185 4198 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
RFWD3Q6PCD5 MANBAL-204ENST00000397151 1503 ntAPPRIS P1 TSL 3 BASIC16.83■□□□□ 0.28
RFWD3Q6PCD5 MANBAL-205ENST00000397152 1539 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
RFWD3Q6PCD5 LHCGR-203ENST00000403273 1921 ntTSL 5 BASIC16.83■□□□□ 0.28
RFWD3Q6PCD5 CENPM-205ENST00000404067 905 ntTSL 3 BASIC16.83■□□□□ 0.28
RFWD3Q6PCD5 REPIN1-202ENST00000425389 2876 ntAPPRIS P3 BASIC16.83■□□□□ 0.28
RFWD3Q6PCD5 AC055876.3-201ENST00000431496 288 ntBASIC16.83■□□□□ 0.28
RFWD3Q6PCD5 DYNC1LI1-204ENST00000432458 1827 ntTSL 2 BASIC16.83■□□□□ 0.28
RFWD3Q6PCD5 TLE6-202ENST00000452088 1883 ntAPPRIS P3 TSL 1 (best) BASIC16.83■□□□□ 0.28
RFWD3Q6PCD5 C16orf89-203ENST00000474471 1829 ntAPPRIS ALT2 TSL 5 BASIC16.83■□□□□ 0.28
RFWD3Q6PCD5 ADAM8-205ENST00000485491 2441 ntTSL 2 BASIC16.83■□□□□ 0.28
RFWD3Q6PCD5 TAGLN-206ENST00000530649 1227 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
RFWD3Q6PCD5 DUT-210ENST00000559935 569 ntTSL 3 BASIC16.83■□□□□ 0.28
RFWD3Q6PCD5 AC092384.3-202ENST00000564646 2873 ntBASIC16.83■□□□□ 0.28
RFWD3Q6PCD5 ZNF667-AS1-204ENST00000588158 921 ntTSL 3 BASIC16.83■□□□□ 0.28
RFWD3Q6PCD5 AC138649.4-201ENST00000612222 287 ntBASIC16.83■□□□□ 0.28
RFWD3Q6PCD5 AC007967.4-201ENST00000614700 386 ntBASIC16.83■□□□□ 0.28
RFWD3Q6PCD5 BACE1-201ENST00000313005 6326 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
RFWD3Q6PCD5 JPH2-202ENST00000372980 4787 ntAPPRIS P1 TSL 5 BASIC16.83■□□□□ 0.28
RFWD3Q6PCD5 AC141586.1-201ENST00000399702 2748 ntTSL 1 (best) BASIC16.83■□□□□ 0.28
RFWD3Q6PCD5 GLUL-201ENST00000311223 4719 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
RFWD3Q6PCD5 CCT2-202ENST00000543146 2189 ntTSL 2 BASIC16.82■□□□□ 0.28
RFWD3Q6PCD5 GFM1-208ENST00000478576 2147 ntTSL 2 BASIC16.82■□□□□ 0.28
RFWD3Q6PCD5 TMUB2-209ENST00000587989 1969 ntAPPRIS ALT1 TSL 3 BASIC16.82■□□□□ 0.28
RFWD3Q6PCD5 CCDC116-203ENST00000607942 1913 ntAPPRIS ALT2 TSL 2 BASIC16.82■□□□□ 0.28
RFWD3Q6PCD5 TXNDC2-201ENST00000306084 1873 ntAPPRIS ALT2 TSL 1 (best) BASIC16.82■□□□□ 0.28
RFWD3Q6PCD5 CT62-201ENST00000449977 1825 ntAPPRIS P2 TSL 1 (best) BASIC16.82■□□□□ 0.28
RFWD3Q6PCD5 ACE-204ENST00000428043 5120 ntTSL 2 BASIC16.82■□□□□ 0.28
RFWD3Q6PCD5 FDX1-201ENST00000260270 3206 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
RFWD3Q6PCD5 MRPS21-201ENST00000581066 1462 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
RFWD3Q6PCD5 COX10-201ENST00000261643 2873 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
RFWD3Q6PCD5 ZFAND5-205ENST00000376962 2785 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
RFWD3Q6PCD5 ZNF382-202ENST00000423582 2657 ntTSL 1 (best) BASIC16.82■□□□□ 0.28
RFWD3Q6PCD5 SRP19-201ENST00000282999 937 ntTSL 1 (best) BASIC16.82■□□□□ 0.28
RFWD3Q6PCD5 GPHB5-201ENST00000314140 393 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
RFWD3Q6PCD5 RPLP2-201ENST00000321153 781 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
RFWD3Q6PCD5 SNURF-201ENST00000338327 331 ntAPPRIS P1 TSL 5 BASIC16.82■□□□□ 0.28
Retrieved 100 of 98,524 protein–RNA pairs in 29.9 ms