Protein–RNA interactions for Protein: P55285

CDH6, Cadherin-6, humanhuman

Predictions only

Length 790 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDH6P55285 SS18L2-202ENST00000447630 1047 ntAPPRIS P1 TSL 2 BASIC16.81■□□□□ 0.28
CDH6P55285 CR559946.1-201ENST00000453835 531 ntTSL 4 BASIC16.81■□□□□ 0.28
CDH6P55285 SLC50A1-209ENST00000484157 886 ntTSL 3 BASIC16.81■□□□□ 0.28
CDH6P55285 EHMT1-216ENST00000493484 1182 ntTSL 3 BASIC16.81■□□□□ 0.28
CDH6P55285 GATB-205ENST00000508611 605 ntTSL 2 BASIC16.81■□□□□ 0.28
CDH6P55285 IGHV3-62-201ENST00000520057 340 ntBASIC16.81■□□□□ 0.28
CDH6P55285 AC005829.1-201ENST00000570002 483 ntBASIC16.81■□□□□ 0.28
CDH6P55285 TNFRSF13B-203ENST00000579315 600 ntAPPRIS ALT2 TSL 3 BASIC16.81■□□□□ 0.28
CDH6P55285 AC104532.1-201ENST00000588891 580 ntAPPRIS P1 TSL 4 BASIC16.81■□□□□ 0.28
CDH6P55285 AC004832.1-201ENST00000610936 1005 ntTSL 5 BASIC16.81■□□□□ 0.28
CDH6P55285 AC020934.3-201ENST00000639810 348 ntAPPRIS P1 TSL 3 BASIC16.81■□□□□ 0.28
CDH6P55285 AXIN2-202ENST00000375702 2541 ntTSL 1 (best) BASIC16.81■□□□□ 0.28
CDH6P55285 CLEC18B-201ENST00000339953 1865 ntAPPRIS P2 TSL 1 (best) BASIC16.81■□□□□ 0.28
CDH6P55285 CLEC18C-202ENST00000536907 1865 ntAPPRIS ALT2 TSL 5 BASIC16.81■□□□□ 0.28
CDH6P55285 POC1B-202ENST00000393179 3096 ntTSL 1 (best) BASIC16.81■□□□□ 0.28
CDH6P55285 MTHFD1L-203ENST00000367321 3604 ntAPPRIS P3 TSL 1 (best) BASIC16.81■□□□□ 0.28
CDH6P55285 MVB12B-201ENST00000361171 4819 ntAPPRIS P1 TSL 2 BASIC16.81■□□□□ 0.28
CDH6P55285 PIK3IP1-203ENST00000441972 2374 ntTSL 2 BASIC16.81■□□□□ 0.28
CDH6P55285 TRAF3-204ENST00000539721 1786 ntTSL 2 BASIC16.81■□□□□ 0.28
CDH6P55285 SPATA21-205ENST00000540400 1773 ntAPPRIS ALT2 TSL 1 (best) BASIC16.81■□□□□ 0.28
CDH6P55285 RNPS1-223ENST00000568631 1792 ntAPPRIS P1 TSL 5 BASIC16.81■□□□□ 0.28
CDH6P55285 KCNA5-201ENST00000252321 2800 ntAPPRIS P1 BASIC16.81■□□□□ 0.28
CDH6P55285 GINS2-201ENST00000253462 2673 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
CDH6P55285 AP1M1-202ENST00000429941 1578 ntTSL 2 BASIC16.81■□□□□ 0.28
CDH6P55285 TTLL3-213ENST00000430793 2097 ntTSL 2 BASIC16.81■□□□□ 0.28
CDH6P55285 KLHL42-201ENST00000381271 6703 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
CDH6P55285 FBLIM1-201ENST00000332305 1530 ntTSL 2 BASIC16.8■□□□□ 0.28
CDH6P55285 TTYH2-206ENST00000529107 2015 ntTSL 2 BASIC16.8■□□□□ 0.28
CDH6P55285 ARHGAP5-205ENST00000433497 3047 ntTSL 1 (best) BASIC16.8■□□□□ 0.28
CDH6P55285 RBPMS-204ENST00000397323 2941 ntAPPRIS P3 TSL 1 (best) BASIC16.8■□□□□ 0.28
CDH6P55285 NPHP3-201ENST00000337331 4362 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
CDH6P55285 CTIF-201ENST00000256413 5750 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
CDH6P55285 PCNX2-201ENST00000258229 7518 ntAPPRIS P2 TSL 5 BASIC16.8■□□□□ 0.28
CDH6P55285 CNGA4-201ENST00000379936 1863 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
CDH6P55285 ATP6AP2-217ENST00000636580 2337 ntAPPRIS P2 TSL 1 (best) BASIC16.8■□□□□ 0.28
CDH6P55285 COL17A1-202ENST00000369733 5488 ntAPPRIS ALT2 TSL 5 BASIC16.8■□□□□ 0.28
CDH6P55285 SELENOF-208ENST00000616787 1835 ntAPPRIS ALT1 TSL 5 BASIC16.8■□□□□ 0.28
CDH6P55285 PIK3R6-203ENST00000614407 2265 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
CDH6P55285 DNAJC10-210ENST00000616986 5783 ntTSL 1 (best) BASIC16.8■□□□□ 0.28
CDH6P55285 ELOF1-203ENST00000586683 2154 ntTSL 2 BASIC16.8■□□□□ 0.28
CDH6P55285 CCDC12-201ENST00000292314 1017 ntTSL 5 BASIC16.8■□□□□ 0.28
CDH6P55285 YBEY-201ENST00000329319 1019 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
CDH6P55285 GPX7-201ENST00000361314 1228 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
CDH6P55285 TEX30-202ENST00000376021 1038 ntTSL 2 BASIC16.8■□□□□ 0.28
CDH6P55285 TEX30-206ENST00000376032 1165 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
CDH6P55285 YBEY-206ENST00000397701 744 ntAPPRIS P1 TSL 2 BASIC16.8■□□□□ 0.28
CDH6P55285 PP14571-201ENST00000404327 934 ntTSL 2 BASIC16.8■□□□□ 0.28
CDH6P55285 TMEM176A-202ENST00000461345 635 ntAPPRIS ALT2 TSL 5 BASIC16.8■□□□□ 0.28
CDH6P55285 RAB7A-204ENST00000483906 533 ntTSL 3 BASIC16.8■□□□□ 0.28
CDH6P55285 AP000842.3-202ENST00000569238 1080 ntBASIC16.8■□□□□ 0.28
CDH6P55285 MIR3687-2-201ENST00000577708 61 ntBASIC16.8■□□□□ 0.28
CDH6P55285 AC024267.1-201ENST00000582320 895 ntBASIC16.8■□□□□ 0.28
CDH6P55285 MIR3687-1-201ENST00000614492 61 ntBASIC16.8■□□□□ 0.28
CDH6P55285 PRMT1-217ENST00000532489 1686 ntTSL 5 BASIC16.8■□□□□ 0.28
CDH6P55285 CD8A-201ENST00000283635 2873 ntAPPRIS P4 TSL 1 (best) BASIC16.8■□□□□ 0.28
CDH6P55285 LARP6-201ENST00000299213 4469 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
CDH6P55285 TMEM86B-201ENST00000327042 1637 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
CDH6P55285 EPB41L3-203ENST00000400111 4259 ntTSL 5 BASIC16.8■□□□□ 0.28
CDH6P55285 ATE1-209ENST00000543447 4826 ntTSL 2 BASIC16.8■□□□□ 0.28
CDH6P55285 PKDREJ-201ENST00000253255 7693 ntAPPRIS P1 BASIC16.8■□□□□ 0.28
CDH6P55285 AC010619.2-201ENST00000595815 1421 ntTSL 2 BASIC16.79■□□□□ 0.28
CDH6P55285 GTPBP8-202ENST00000383677 1787 ntTSL 3 BASIC16.79■□□□□ 0.28
CDH6P55285 SRPK3-201ENST00000370100 1717 ntAPPRIS ALT2 TSL 5 BASIC16.79■□□□□ 0.28
CDH6P55285 SYT1-201ENST00000261205 4808 ntAPPRIS P3 TSL 1 (best) BASIC16.79■□□□□ 0.28
CDH6P55285 AZI2-205ENST00000420543 1366 ntTSL 3 BASIC16.79■□□□□ 0.28
CDH6P55285 PLPPR2-201ENST00000251473 2727 ntAPPRIS P3 TSL 1 (best) BASIC16.79■□□□□ 0.28
CDH6P55285 ZNF644-201ENST00000337393 5763 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
CDH6P55285 CISH-201ENST00000348721 2043 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
CDH6P55285 MAGEA2-208ENST00000623438 2009 ntAPPRIS P1 TSL 2 BASIC16.79■□□□□ 0.28
CDH6P55285 MCF2L2-201ENST00000328913 4980 ntAPPRIS P2 TSL 5 BASIC16.79■□□□□ 0.28
CDH6P55285 IFT140-201ENST00000361339 2987 ntTSL 1 (best) BASIC16.79■□□□□ 0.28
CDH6P55285 AEBP1-206ENST00000450684 2571 ntTSL 2 BASIC16.79■□□□□ 0.28
CDH6P55285 TBP-202ENST00000392092 1903 ntAPPRIS P3 TSL 1 (best) BASIC16.79■□□□□ 0.28
CDH6P55285 ELL2P1-201ENST00000413990 1906 ntBASIC16.79■□□□□ 0.28
CDH6P55285 PFN4-201ENST00000313213 974 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
CDH6P55285 CBR1-202ENST00000399191 838 ntTSL 3 BASIC16.79■□□□□ 0.28
CDH6P55285 JMJD7-203ENST00000408047 1192 ntTSL 5 BASIC16.79■□□□□ 0.28
CDH6P55285 PTGES3-204ENST00000448157 1017 ntTSL 2 BASIC16.79■□□□□ 0.28
CDH6P55285 AC018730.1-201ENST00000454183 327 ntTSL 3 BASIC16.79■□□□□ 0.28
CDH6P55285 CALM1-205ENST00000553542 877 ntTSL 5 BASIC16.79■□□□□ 0.28
CDH6P55285 AC090515.4-201ENST00000558042 450 ntTSL 3 BASIC16.79■□□□□ 0.28
CDH6P55285 LINC01225-203ENST00000563550 1244 ntBASIC16.79■□□□□ 0.28
CDH6P55285 TWSG1-202ENST00000581641 1119 ntTSL 2 BASIC16.79■□□□□ 0.28
CDH6P55285 AC061975.2-201ENST00000581722 295 ntBASIC16.79■□□□□ 0.28
CDH6P55285 AC005330.1-201ENST00000590086 1238 ntTSL 5 BASIC16.79■□□□□ 0.28
CDH6P55285 LINC00623-204ENST00000617702 746 ntTSL 5 BASIC16.79■□□□□ 0.28
CDH6P55285 GDF6-201ENST00000287020 3701 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
CDH6P55285 DKC1-213ENST00000620277 3079 ntAPPRIS ALT2 TSL 1 (best) BASIC16.79■□□□□ 0.28
CDH6P55285 CNPY4-201ENST00000262932 1502 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
CDH6P55285 SLCO2B1-205ENST00000525650 2121 ntTSL 2 BASIC16.79■□□□□ 0.28
CDH6P55285 RB1CC1-201ENST00000025008 6635 ntAPPRIS P3 TSL 1 (best) BASIC16.79■□□□□ 0.28
CDH6P55285 AC092198.1-201ENST00000447651 2691 ntTSL 2 BASIC16.79■□□□□ 0.28
CDH6P55285 CYP4F3-202ENST00000585846 2056 ntAPPRIS ALT1 TSL 1 (best) BASIC16.79■□□□□ 0.28
CDH6P55285 SLC3A2-208ENST00000536981 1486 ntTSL 2 BASIC16.79■□□□□ 0.28
CDH6P55285 STAC-201ENST00000273183 3227 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
CDH6P55285 ASXL1-210ENST00000613218 7038 ntAPPRIS ALT2 TSL 5 BASIC16.79■□□□□ 0.28
CDH6P55285 UNC13A-204ENST00000550896 5200 ntAPPRIS ALT2 TSL 5 BASIC16.79■□□□□ 0.28
CDH6P55285 HLA-DQB2-231ENST00000435145 2026 ntBASIC16.79■□□□□ 0.28
CDH6P55285 DRG1-201ENST00000331457 1746 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
CDH6P55285 VOPP1-207ENST00000428648 2866 ntTSL 2 BASIC16.79■□□□□ 0.28
Retrieved 100 of 98,524 protein–RNA pairs in 26.8 ms