Protein–RNA interactions for Protein: P33552

CKS2, Cyclin-dependent kinases regulatory subunit 2, humanhuman

Predictions only

Length 79 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CKS2P33552 NFATC4-221ENST00000555453 3169 ntAPPRIS ALT2 TSL 1 (best) BASIC11.94□□□□□ -0.5
CKS2P33552 OGFOD3-201ENST00000313056 4287 ntAPPRIS P1 TSL 2 BASIC11.94□□□□□ -0.5
CKS2P33552 AC009053.1-201ENST00000566802 2320 ntTSL 1 (best) BASIC11.94□□□□□ -0.5
CKS2P33552 SSB-202ENST00000409333 1782 ntAPPRIS P1 TSL 1 (best) BASIC11.94□□□□□ -0.5
CKS2P33552 NUDT3-201ENST00000607016 9905 ntAPPRIS P1 TSL 1 (best) BASIC11.94□□□□□ -0.5
CKS2P33552 GRIP2-204ENST00000619221 7977 ntAPPRIS P5 TSL 5 BASIC11.94□□□□□ -0.5
CKS2P33552 SLC4A9-203ENST00000506545 2838 ntTSL 1 (best) BASIC11.94□□□□□ -0.5
CKS2P33552 DHX40-202ENST00000425628 2255 ntTSL 2 BASIC11.94□□□□□ -0.5
CKS2P33552 EXOG-201ENST00000287675 2792 ntAPPRIS P1 TSL 1 (best) BASIC11.94□□□□□ -0.5
CKS2P33552 GPER1-201ENST00000297469 2778 ntAPPRIS P1 TSL 1 (best) BASIC11.94□□□□□ -0.5
CKS2P33552 SLC35A2-204ENST00000376521 3047 ntAPPRIS ALT1 TSL 1 (best) BASIC11.94□□□□□ -0.5
CKS2P33552 RRP1-207ENST00000497547 3022 ntAPPRIS P1 TSL 1 (best) BASIC11.94□□□□□ -0.5
CKS2P33552 PRKAG3-206ENST00000529249 2222 ntAPPRIS P1 TSL 1 (best) BASIC11.94□□□□□ -0.5
CKS2P33552 TAF1C-216ENST00000566732 2972 ntAPPRIS ALT2 TSL 2 BASIC11.94□□□□□ -0.5
CKS2P33552 C21orf33-201ENST00000291577 1674 ntAPPRIS P1 TSL 1 (best) BASIC11.94□□□□□ -0.5
CKS2P33552 LRRC61-201ENST00000323078 1684 ntAPPRIS P1 TSL 1 (best) BASIC11.94□□□□□ -0.5
CKS2P33552 CLEC18A-201ENST00000288040 2155 ntAPPRIS P2 TSL 1 (best) BASIC11.94□□□□□ -0.5
CKS2P33552 DISP3-201ENST00000294484 5215 ntAPPRIS P1 TSL 1 (best) BASIC11.94□□□□□ -0.5
CKS2P33552 SERPINA3-203ENST00000467132 2660 ntAPPRIS P1 TSL 2 BASIC11.94□□□□□ -0.5
CKS2P33552 RNF157-202ENST00000319945 2937 ntAPPRIS ALT2 TSL 2 BASIC11.93□□□□□ -0.5
CKS2P33552 HSP90B1-201ENST00000299767 2858 ntAPPRIS P1 TSL 1 (best) BASIC11.93□□□□□ -0.5
CKS2P33552 TSPEAR-202ENST00000397916 2114 ntTSL 1 (best) BASIC11.93□□□□□ -0.5
CKS2P33552 NEFL-203ENST00000619417 1879 ntTSL 5 BASIC11.93□□□□□ -0.5
CKS2P33552 AC148477.5-201ENST00000625164 1645 ntBASIC11.93□□□□□ -0.5
CKS2P33552 COTL1-201ENST00000262428 1843 ntAPPRIS P1 TSL 1 (best) BASIC11.93□□□□□ -0.5
CKS2P33552 POFUT1-202ENST00000375749 5235 ntAPPRIS P1 TSL 1 (best) BASIC11.93□□□□□ -0.5
CKS2P33552 HARS2-206ENST00000508522 1562 ntTSL 2 BASIC11.93□□□□□ -0.5
CKS2P33552 EGR3-204ENST00000522910 1553 ntAPPRIS ALT1 TSL 2 BASIC11.93□□□□□ -0.5
CKS2P33552 RER1-203ENST00000378513 3000 ntTSL 3 BASIC11.93□□□□□ -0.5
CKS2P33552 PAK4-205ENST00000593690 3025 ntAPPRIS P1 TSL 1 (best) BASIC11.93□□□□□ -0.5
CKS2P33552 POR-201ENST00000394893 2532 ntTSL 5 BASIC11.93□□□□□ -0.5
CKS2P33552 GMPPB-203ENST00000480687 6108 ntAPPRIS P1 TSL 2 BASIC11.93□□□□□ -0.5
CKS2P33552 CYB561-219ENST00000584031 3200 ntTSL 2 BASIC11.93□□□□□ -0.5
CKS2P33552 ATP6AP2-201ENST00000378438 2022 ntAPPRIS ALT2 TSL 5 BASIC11.93□□□□□ -0.5
CKS2P33552 PKN1-202ENST00000342216 2960 ntTSL 2 BASIC11.93□□□□□ -0.5
CKS2P33552 KCNJ14-201ENST00000342291 2960 ntAPPRIS P1 TSL 1 (best) BASIC11.93□□□□□ -0.5
CKS2P33552 ZSCAN18-208ENST00000595944 1768 ntTSL 2 BASIC11.93□□□□□ -0.5
CKS2P33552 NIN-202ENST00000324330 4364 ntTSL 5 BASIC11.93□□□□□ -0.5
CKS2P33552 CYP4F3-201ENST00000221307 5050 ntAPPRIS P3 TSL 1 (best) BASIC11.93□□□□□ -0.5
CKS2P33552 BRCC3-201ENST00000330045 2496 ntTSL 1 (best) BASIC11.93□□□□□ -0.5
CKS2P33552 FMNL1-206ENST00000587489 2487 ntTSL 1 (best) BASIC11.93□□□□□ -0.5
CKS2P33552 SDCBP2-202ENST00000360779 1519 ntAPPRIS P1 TSL 1 (best) BASIC11.93□□□□□ -0.5
CKS2P33552 PRKN-202ENST00000366892 1505 ntTSL 5 BASIC11.93□□□□□ -0.5
CKS2P33552 AC126755.2-202ENST00000427999 1547 ntAPPRIS P1 TSL 1 (best) BASIC11.93□□□□□ -0.5
CKS2P33552 NRP2-203ENST00000357785 2926 ntAPPRIS P4 TSL 1 (best) BASIC11.93□□□□□ -0.5
CKS2P33552 EXOC3L2-201ENST00000252482 1230 ntTSL 1 (best) BASIC11.93□□□□□ -0.5
CKS2P33552 COMMD1-201ENST00000311832 911 ntAPPRIS P1 TSL 1 (best) BASIC11.93□□□□□ -0.5
CKS2P33552 RAC1-202ENST00000356142 907 ntTSL 1 (best) BASIC11.93□□□□□ -0.5
CKS2P33552 MRPL24-202ENST00000368211 883 ntAPPRIS P1 TSL 1 (best) BASIC11.93□□□□□ -0.5
CKS2P33552 WDR53-204ENST00000433160 887 ntTSL 5 BASIC11.93□□□□□ -0.5
CKS2P33552 DGUOK-AS1-203ENST00000453103 601 ntTSL 3 BASIC11.93□□□□□ -0.5
CKS2P33552 SNORA78-201ENST00000459373 127 ntBASIC11.93□□□□□ -0.5
CKS2P33552 SMIM4-202ENST00000476842 522 ntTSL 4 BASIC11.93□□□□□ -0.5
CKS2P33552 AC009185.1-201ENST00000517634 911 ntTSL 3 BASIC11.93□□□□□ -0.5
CKS2P33552 VENTXP5-201ENST00000523979 775 ntBASIC11.93□□□□□ -0.5
CKS2P33552 AC089999.2-201ENST00000552525 248 ntTSL 3 BASIC11.93□□□□□ -0.5
CKS2P33552 AC106782.2-201ENST00000563252 992 ntTSL 3 BASIC11.93□□□□□ -0.5
CKS2P33552 AC104971.2-201ENST00000588144 1209 ntTSL 2 BASIC11.93□□□□□ -0.5
CKS2P33552 AC011467.2-201ENST00000598425 242 ntBASIC11.93□□□□□ -0.5
CKS2P33552 AC006942.1-201ENST00000600669 520 ntTSL 2 BASIC11.93□□□□□ -0.5
CKS2P33552 AXIN2-208ENST00000611991 1019 ntTSL 5 BASIC11.93□□□□□ -0.5
CKS2P33552 IGHV3-41-201ENST00000613121 348 ntBASIC11.93□□□□□ -0.5
CKS2P33552 AC011558.1-201ENST00000623459 338 ntBASIC11.93□□□□□ -0.5
CKS2P33552 PGM5P2-202ENST00000637225 1043 ntBASIC11.93□□□□□ -0.5
CKS2P33552 ABCA2-203ENST00000371605 8151 ntAPPRIS ALT2 TSL 2 BASIC11.93□□□□□ -0.5
CKS2P33552 PLXNB2-201ENST00000359337 6335 ntAPPRIS P1 TSL 5 BASIC11.93□□□□□ -0.5
CKS2P33552 ARPC1B-211ENST00000451682 1715 ntAPPRIS P1 TSL 5 BASIC11.93□□□□□ -0.5
CKS2P33552 CAND2-201ENST00000295989 4429 ntTSL 1 (best) BASIC11.93□□□□□ -0.5
CKS2P33552 HSDL1-202ENST00000434463 1493 ntTSL 2 BASIC11.93□□□□□ -0.5
CKS2P33552 NRXN1-207ENST00000404971 7578 ntTSL 1 (best) BASIC11.93□□□□□ -0.5
CKS2P33552 TRAF7-201ENST00000326181 3700 ntAPPRIS P1 TSL 1 (best) BASIC11.93□□□□□ -0.5
CKS2P33552 PHTF1-202ENST00000369598 3000 ntTSL 5 BASIC11.93□□□□□ -0.5
CKS2P33552 SWSAP1-201ENST00000312423 1684 ntAPPRIS P1 TSL 1 (best) BASIC11.93□□□□□ -0.5
CKS2P33552 CSF3-202ENST00000331769 1673 ntAPPRIS ALT2 TSL 1 (best) BASIC11.93□□□□□ -0.5
CKS2P33552 C16orf58-201ENST00000327237 2793 ntAPPRIS P2 TSL 1 (best) BASIC11.93□□□□□ -0.5
CKS2P33552 ALOX15-202ENST00000570836 2784 ntAPPRIS P1 TSL 2 BASIC11.93□□□□□ -0.5
CKS2P33552 ARID4B-201ENST00000264183 4995 ntAPPRIS P1 TSL 1 (best) BASIC11.93□□□□□ -0.5
CKS2P33552 ATP2C1-214ENST00000508532 4969 ntAPPRIS ALT1 TSL 1 (best) BASIC11.93□□□□□ -0.5
CKS2P33552 CNGA4-201ENST00000379936 1863 ntAPPRIS P1 TSL 1 (best) BASIC11.93□□□□□ -0.5
CKS2P33552 SPDEF-202ENST00000544425 1866 ntAPPRIS ALT1 TSL 2 BASIC11.93□□□□□ -0.5
CKS2P33552 NPHP3-AS1-201ENST00000489343 2957 ntTSL 1 (best) BASIC11.93□□□□□ -0.5
CKS2P33552 S1PR2-201ENST00000590320 3582 ntAPPRIS P1 TSL 3 BASIC11.93□□□□□ -0.5
CKS2P33552 ELAVL2-201ENST00000223951 3763 ntAPPRIS ALT1 TSL 1 (best) BASIC11.93□□□□□ -0.5
CKS2P33552 WLS-202ENST00000354777 2037 ntTSL 1 (best) BASIC11.93□□□□□ -0.5
CKS2P33552 TRIM56-201ENST00000306085 10952 ntAPPRIS P2 TSL 1 (best) BASIC11.93□□□□□ -0.5
CKS2P33552 WAPL-201ENST00000263070 5987 ntTSL 5 BASIC11.92□□□□□ -0.5
CKS2P33552 PPFIA4-202ENST00000295706 6395 ntAPPRIS ALT2 TSL 5 BASIC11.92□□□□□ -0.5
CKS2P33552 RBM4-204ENST00000408993 1763 ntAPPRIS P1 TSL 5 BASIC11.92□□□□□ -0.5
CKS2P33552 NEBL-203ENST00000417816 3008 ntAPPRIS P1 TSL 1 (best) BASIC11.92□□□□□ -0.5
CKS2P33552 ASS1-204ENST00000372394 1973 ntAPPRIS P1 TSL 2 BASIC11.92□□□□□ -0.5
CKS2P33552 ITGB4-202ENST00000449880 5689 ntAPPRIS P3 TSL 1 (best) BASIC11.92□□□□□ -0.5
CKS2P33552 COL8A2-201ENST00000303143 4447 ntAPPRIS P1 TSL 2 BASIC11.92□□□□□ -0.5
CKS2P33552 ACTR3-208ENST00000535589 1530 ntTSL 2 BASIC11.92□□□□□ -0.5
CKS2P33552 LMNA-202ENST00000361308 1713 ntTSL 5 BASIC11.92□□□□□ -0.5
CKS2P33552 PCMTD1-206ENST00000521344 1712 ntTSL 3 BASIC11.92□□□□□ -0.5
CKS2P33552 NDRG2-202ENST00000298687 2122 ntAPPRIS P4 TSL 1 (best) BASIC11.92□□□□□ -0.5
CKS2P33552 LINC02212-201ENST00000515243 2130 ntTSL 2 BASIC11.92□□□□□ -0.5
CKS2P33552 CA10-201ENST00000285273 2914 ntAPPRIS P1 TSL 1 (best) BASIC11.92□□□□□ -0.5
CKS2P33552 YIPF6-204ENST00000462683 6741 ntAPPRIS P1 TSL 1 (best) BASIC11.92□□□□□ -0.5
CKS2P33552 COL20A1-203ENST00000422202 8097 ntAPPRIS ALT2 TSL 5 BASIC11.92□□□□□ -0.5
Retrieved 100 of 98,524 protein–RNA pairs in 30.7 ms