Protein–RNA interactions for Protein: P0DL12

SMIM17, Small integral membrane protein 17, humanhuman

Predictions only

Length 118 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SMIM17P0DL12 SLC24A3-201ENST00000328041 3929 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
SMIM17P0DL12 AC010491.1-201ENST00000563101 2797 ntBASIC12.11□□□□□ -0.47
SMIM17P0DL12 SNAPC1-201ENST00000216294 2656 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
SMIM17P0DL12 C19orf48-201ENST00000345523 1503 ntAPPRIS P1 TSL 2 BASIC12.11□□□□□ -0.47
SMIM17P0DL12 CPSF1-212ENST00000616140 4494 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
SMIM17P0DL12 SLC27A5-201ENST00000263093 2361 ntAPPRIS P3 TSL 1 (best) BASIC12.11□□□□□ -0.47
SMIM17P0DL12 PSMC3IP-202ENST00000393795 1416 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
SMIM17P0DL12 KCNC3-202ENST00000474951 3347 ntTSL 2 BASIC12.11□□□□□ -0.47
SMIM17P0DL12 ARFGAP1-220ENST00000547204 1327 ntTSL 2 BASIC12.11□□□□□ -0.47
SMIM17P0DL12 SLC39A1-202ENST00000356205 2084 ntAPPRIS P1 TSL 1 (best) BASIC12.1□□□□□ -0.47
SMIM17P0DL12 RUNDC3B-203ENST00000394654 2064 ntAPPRIS P4 TSL 2 BASIC12.1□□□□□ -0.47
SMIM17P0DL12 CLEC18A-202ENST00000393701 1955 ntAPPRIS P2 TSL 1 (best) BASIC12.1□□□□□ -0.47
SMIM17P0DL12 CLEC18C-203ENST00000541793 1955 ntAPPRIS P2 TSL 1 (best) BASIC12.1□□□□□ -0.47
SMIM17P0DL12 C20orf203-202ENST00000608990 5076 ntTSL 1 (best) BASIC12.1□□□□□ -0.47
SMIM17P0DL12 SLFNL1-203ENST00000372611 1865 ntAPPRIS ALT2 TSL 2 BASIC12.1□□□□□ -0.47
SMIM17P0DL12 RBPJ-204ENST00000348160 1752 ntAPPRIS ALT1 TSL 1 (best) BASIC12.1□□□□□ -0.47
SMIM17P0DL12 INTS11-203ENST00000419704 1798 ntTSL 2 BASIC12.1□□□□□ -0.47
SMIM17P0DL12 BAIAP3-202ENST00000397488 4583 ntTSL 1 (best) BASIC12.1□□□□□ -0.47
SMIM17P0DL12 SMAP1-201ENST00000316999 2403 ntAPPRIS P3 TSL 1 (best) BASIC12.1□□□□□ -0.47
SMIM17P0DL12 POM121-205ENST00000627934 5480 ntAPPRIS P3 TSL 5 BASIC12.1□□□□□ -0.47
SMIM17P0DL12 TPD52L2-203ENST00000348257 2237 ntAPPRIS ALT1 TSL 1 (best) BASIC12.1□□□□□ -0.47
SMIM17P0DL12 TIGAR-201ENST00000179259 2782 ntAPPRIS P1 TSL 1 (best) BASIC12.1□□□□□ -0.47
SMIM17P0DL12 ROBO1-201ENST00000436010 7501 ntTSL 5 BASIC12.1□□□□□ -0.47
SMIM17P0DL12 CTNS-202ENST00000381870 2470 ntTSL 1 (best) BASIC12.1□□□□□ -0.47
SMIM17P0DL12 FAM237A-203ENST00000543490 1376 ntAPPRIS P1 TSL 5 BASIC12.1□□□□□ -0.47
SMIM17P0DL12 PRKD2-216ENST00000601806 2906 ntAPPRIS ALT2 TSL 5 BASIC12.1□□□□□ -0.47
SMIM17P0DL12 CFAP45-201ENST00000368099 1842 ntAPPRIS P2 TSL 1 (best) BASIC12.1□□□□□ -0.47
SMIM17P0DL12 MEIS3-206ENST00000559524 1828 ntAPPRIS P3 TSL 2 BASIC12.1□□□□□ -0.47
SMIM17P0DL12 SOD2-201ENST00000337404 991 ntTSL 2 BASIC12.1□□□□□ -0.47
SMIM17P0DL12 SPDYE2-201ENST00000341656 1219 ntAPPRIS ALT2 TSL 1 (best) BASIC12.1□□□□□ -0.47
SMIM17P0DL12 MADCAM1-203ENST00000382683 603 ntTSL 1 (best) BASIC12.1□□□□□ -0.47
SMIM17P0DL12 RBCK1-206ENST00000400247 790 ntTSL 2 BASIC12.1□□□□□ -0.47
SMIM17P0DL12 AL031587.1-201ENST00000410099 1055 ntTSL 1 (best) BASIC12.1□□□□□ -0.47
SMIM17P0DL12 SPDYE2B-202ENST00000455020 1219 ntAPPRIS ALT2 TSL 1 (best) BASIC12.1□□□□□ -0.47
SMIM17P0DL12 TMUB1-205ENST00000482202 899 ntAPPRIS P1 TSL 3 BASIC12.1□□□□□ -0.47
SMIM17P0DL12 DUX4L17-201ENST00000557360 1267 ntBASIC12.1□□□□□ -0.47
SMIM17P0DL12 AC127496.4-201ENST00000571591 549 ntTSL 4 BASIC12.1□□□□□ -0.47
SMIM17P0DL12 MIR22HG-204ENST00000571595 767 ntTSL 5 BASIC12.1□□□□□ -0.47
SMIM17P0DL12 AC002091.2-201ENST00000585297 402 ntTSL 2 BASIC12.1□□□□□ -0.47
SMIM17P0DL12 C19orf25-210ENST00000591027 574 ntTSL 4 BASIC12.1□□□□□ -0.47
SMIM17P0DL12 CLDND2-203ENST00000601435 575 ntAPPRIS P1 TSL 3 BASIC12.1□□□□□ -0.47
SMIM17P0DL12 TERC-201ENST00000602385 541 ntBASIC12.1□□□□□ -0.47
SMIM17P0DL12 MED16-213ENST00000616387 1078 ntTSL 1 (best) BASIC12.1□□□□□ -0.47
SMIM17P0DL12 CBWD1-202ENST00000356521 1706 ntAPPRIS P1 TSL 1 (best) BASIC12.1□□□□□ -0.47
SMIM17P0DL12 PCMTD1-206ENST00000521344 1712 ntTSL 3 BASIC12.1□□□□□ -0.47
SMIM17P0DL12 ZNF580-202ENST00000543039 1707 ntAPPRIS P1 BASIC12.1□□□□□ -0.47
SMIM17P0DL12 AC114490.1-201ENST00000417456 3163 ntTSL 2 BASIC12.1□□□□□ -0.47
SMIM17P0DL12 GRB7-205ENST00000445327 2197 ntTSL 2 BASIC12.1□□□□□ -0.47
SMIM17P0DL12 AC007182.1-201ENST00000455232 2159 ntTSL 1 (best) BASIC12.1□□□□□ -0.47
SMIM17P0DL12 MC1R-202ENST00000555147 3099 ntAPPRIS P1 BASIC12.1□□□□□ -0.47
SMIM17P0DL12 FLT4-201ENST00000261937 5857 ntAPPRIS P1 TSL 1 (best) BASIC12.1□□□□□ -0.47
SMIM17P0DL12 RRM1-214ENST00000534285 2075 ntTSL 5 BASIC12.1□□□□□ -0.47
SMIM17P0DL12 BECN1-213ENST00000590099 2087 ntAPPRIS P1 TSL 1 (best) BASIC12.1□□□□□ -0.47
SMIM17P0DL12 GHDC-203ENST00000428494 2518 ntTSL 5 BASIC12.1□□□□□ -0.47
SMIM17P0DL12 UBA5-213ENST00000494238 2997 ntTSL 1 (best) BASIC12.1□□□□□ -0.47
SMIM17P0DL12 DDOST-206ENST00000602624 1963 ntAPPRIS P1 TSL 1 (best) BASIC12.1□□□□□ -0.47
SMIM17P0DL12 SKP2-201ENST00000274254 1537 ntTSL 1 (best) BASIC12.1□□□□□ -0.47
SMIM17P0DL12 KLF11-205ENST00000535335 4033 ntAPPRIS ALT2 TSL 2 BASIC12.1□□□□□ -0.47
SMIM17P0DL12 NAXD-202ENST00000424185 2311 ntTSL 2 BASIC12.1□□□□□ -0.47
SMIM17P0DL12 SCP2-201ENST00000371509 1889 ntTSL 1 (best) BASIC12.1□□□□□ -0.47
SMIM17P0DL12 TCF4-248ENST00000616053 8140 ntTSL 5 BASIC12.1□□□□□ -0.47
SMIM17P0DL12 GBF1-201ENST00000369983 6403 ntAPPRIS P1 TSL 1 (best) BASIC12.1□□□□□ -0.47
SMIM17P0DL12 GINS2-201ENST00000253462 2673 ntAPPRIS P1 TSL 1 (best) BASIC12.1□□□□□ -0.47
SMIM17P0DL12 CLEC18A-209ENST00000615430 2215 ntAPPRIS P2 TSL 5 BASIC12.1□□□□□ -0.47
SMIM17P0DL12 CLEC18C-211ENST00000618957 2215 ntAPPRIS P2 TSL 5 BASIC12.1□□□□□ -0.47
SMIM17P0DL12 CLEC18B-205ENST00000619275 2215 ntAPPRIS ALT2 TSL 5 BASIC12.1□□□□□ -0.47
SMIM17P0DL12 NEK11-210ENST00000510769 2149 ntTSL 2 BASIC12.1□□□□□ -0.47
SMIM17P0DL12 ESM1-201ENST00000381403 1326 ntTSL 1 (best) BASIC12.1□□□□□ -0.47
SMIM17P0DL12 C8orf46-215ENST00000522977 1347 ntTSL 2 BASIC12.1□□□□□ -0.47
SMIM17P0DL12 XRCC1-201ENST00000262887 2802 ntAPPRIS P1 TSL 1 (best) BASIC12.1□□□□□ -0.47
SMIM17P0DL12 ATG13-216ENST00000530500 2030 ntTSL 2 BASIC12.1□□□□□ -0.47
SMIM17P0DL12 SLC4A5-205ENST00000394019 6348 ntAPPRIS ALT2 TSL 5 BASIC12.09□□□□□ -0.47
SMIM17P0DL12 CPSF1-213ENST00000620219 4462 ntAPPRIS P1 TSL 1 (best) BASIC12.09□□□□□ -0.47
SMIM17P0DL12 GPANK1-203ENST00000375896 1910 ntAPPRIS P1 TSL 1 (best) BASIC12.09□□□□□ -0.47
SMIM17P0DL12 TNNI1-207ENST00000622580 6142 ntAPPRIS ALT1 TSL 1 (best) BASIC12.09□□□□□ -0.47
SMIM17P0DL12 KCTD3-201ENST00000259154 3931 ntAPPRIS P1 TSL 1 (best) BASIC12.09□□□□□ -0.47
SMIM17P0DL12 ATG4B-205ENST00000404914 2878 ntAPPRIS P1 TSL 1 (best) BASIC12.09□□□□□ -0.47
SMIM17P0DL12 ABCA2-203ENST00000371605 8151 ntAPPRIS ALT2 TSL 2 BASIC12.09□□□□□ -0.47
SMIM17P0DL12 ZNF334-202ENST00000457685 3487 ntTSL 2 BASIC12.09□□□□□ -0.47
SMIM17P0DL12 MAPK4-201ENST00000400384 4770 ntAPPRIS P1 TSL 1 (best) BASIC12.09□□□□□ -0.47
SMIM17P0DL12 RAP1GDS1-203ENST00000380158 2085 ntTSL 1 (best) BASIC12.09□□□□□ -0.47
SMIM17P0DL12 SPHK2-210ENST00000599748 2683 ntAPPRIS ALT2 TSL 1 (best) BASIC12.09□□□□□ -0.47
SMIM17P0DL12 CBFA2T3-201ENST00000268679 4477 ntAPPRIS P4 TSL 1 (best) BASIC12.09□□□□□ -0.47
SMIM17P0DL12 HIPK1-205ENST00000369558 8157 ntAPPRIS P1 TSL 1 (best) BASIC12.09□□□□□ -0.47
SMIM17P0DL12 GALNTL6-205ENST00000511251 2905 ntTSL 1 (best) BASIC12.09□□□□□ -0.47
SMIM17P0DL12 DSE-201ENST00000331677 7237 ntAPPRIS P1 TSL 5 BASIC12.09□□□□□ -0.47
SMIM17P0DL12 TOP3BP1-201ENST00000420768 1380 ntBASIC12.09□□□□□ -0.47
SMIM17P0DL12 AC233702.3-201ENST00000578656 1387 ntBASIC12.09□□□□□ -0.47
SMIM17P0DL12 STRCP1-201ENST00000509801 5328 ntBASIC12.09□□□□□ -0.47
SMIM17P0DL12 ATG9A-205ENST00000409618 4025 ntAPPRIS P1 TSL 5 BASIC12.09□□□□□ -0.47
SMIM17P0DL12 RPS23-201ENST00000296674 3437 ntAPPRIS P1 TSL 1 (best) BASIC12.09□□□□□ -0.47
SMIM17P0DL12 ADGRG6-202ENST00000296932 6849 ntTSL 1 (best) BASIC12.09□□□□□ -0.47
SMIM17P0DL12 BDKRB2-202ENST00000542454 6845 ntTSL 1 (best) BASIC12.09□□□□□ -0.47
SMIM17P0DL12 AKAP2-203ENST00000434623 4400 ntAPPRIS ALT2 TSL 1 (best) BASIC12.09□□□□□ -0.47
SMIM17P0DL12 SLC2A8-201ENST00000373352 914 ntTSL 2 BASIC12.09□□□□□ -0.47
SMIM17P0DL12 MPIG6B-202ENST00000375805 668 ntAPPRIS ALT2 TSL 1 (best) BASIC12.09□□□□□ -0.47
SMIM17P0DL12 AANAT-202ENST00000392492 1005 ntAPPRIS P1 TSL 1 (best) BASIC12.09□□□□□ -0.47
SMIM17P0DL12 RPAP3-203ENST00000432584 2133 ntTSL 2 BASIC12.09□□□□□ -0.47
SMIM17P0DL12 AC108025.1-201ENST00000453678 1058 ntTSL 5 BASIC12.09□□□□□ -0.47
SMIM17P0DL12 POU5F1P6-201ENST00000466990 990 ntBASIC12.09□□□□□ -0.47
Retrieved 100 of 98,524 protein–RNA pairs in 66.1 ms