Protein–RNA interactions for Protein: P0C091

FREM3, FRAS1-related extracellular matrix protein 3, humanhuman

Predictions only

Length 2,139 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
FREM3P0C091 NDUFS2-202ENST00000392179 2064 ntAPPRIS ALT1 TSL 1 (best) BASIC14.63□□□□□ -0.07
FREM3P0C091 DUSP13-203ENST00000372702 1778 ntAPPRIS ALT1 TSL 1 (best) BASIC14.63□□□□□ -0.07
FREM3P0C091 MPPE1-211ENST00000588072 4236 ntAPPRIS P1 TSL 1 (best) BASIC14.63□□□□□ -0.07
FREM3P0C091 MPPED1-202ENST00000417669 3657 ntAPPRIS P1 TSL 5 BASIC14.63□□□□□ -0.07
FREM3P0C091 MAP7-209ENST00000618822 4497 ntAPPRIS ALT2 TSL 5 BASIC14.63□□□□□ -0.07
FREM3P0C091 FGD4-212ENST00000534526 2977 ntTSL 5 BASIC14.63□□□□□ -0.07
FREM3P0C091 ATP6AP2-201ENST00000378438 2022 ntAPPRIS ALT2 TSL 5 BASIC14.63□□□□□ -0.07
FREM3P0C091 CDC14A-202ENST00000361544 2417 ntAPPRIS P4 TSL 1 (best) BASIC14.63□□□□□ -0.07
FREM3P0C091 SHISA5-208ENST00000442747 2250 ntTSL 2 BASIC14.63□□□□□ -0.07
FREM3P0C091 CCDC105-201ENST00000292574 1732 ntAPPRIS P1 TSL 1 (best) BASIC14.63□□□□□ -0.07
FREM3P0C091 SCAP-201ENST00000265565 4394 ntAPPRIS P1 TSL 1 (best) BASIC14.63□□□□□ -0.07
FREM3P0C091 TUBA1C-201ENST00000301072 3001 ntAPPRIS P1 TSL 1 (best) BASIC14.63□□□□□ -0.07
FREM3P0C091 ELMO1-209ENST00000448602 2621 ntAPPRIS P1 TSL 1 (best) BASIC14.63□□□□□ -0.07
FREM3P0C091 SP100-205ENST00000409824 1802 ntTSL 5 BASIC14.63□□□□□ -0.07
FREM3P0C091 CASK-203ENST00000378163 4411 ntAPPRIS ALT1 TSL 5 BASIC14.63□□□□□ -0.07
FREM3P0C091 PRMT5-203ENST00000397440 1907 ntTSL 1 (best) BASIC14.63□□□□□ -0.07
FREM3P0C091 SBSN-201ENST00000452271 1945 ntAPPRIS ALT2 TSL 1 (best) BASIC14.63□□□□□ -0.07
FREM3P0C091 CYSRT1-201ENST00000409414 1297 ntAPPRIS P1 TSL 1 (best) BASIC14.63□□□□□ -0.07
FREM3P0C091 IL12RB2-205ENST00000541374 3849 ntTSL 1 (best) BASIC14.63□□□□□ -0.07
FREM3P0C091 PRR29-204ENST00000577953 565 ntTSL 4 BASIC14.63□□□□□ -0.07
FREM3P0C091 AC026803.2-201ENST00000599784 819 ntTSL 3 BASIC14.63□□□□□ -0.07
FREM3P0C091 MARCH2-206ENST00000601283 747 ntTSL 3 BASIC14.63□□□□□ -0.07
FREM3P0C091 AC090164.4-201ENST00000632451 313 ntTSL 5 BASIC14.63□□□□□ -0.07
FREM3P0C091 HAUS2-211ENST00000639412 375 ntTSL 2 BASIC14.63□□□□□ -0.07
FREM3P0C091 CLCNKB-204ENST00000619181 1544 ntTSL 5 BASIC14.63□□□□□ -0.07
FREM3P0C091 AP003680.1-201ENST00000598970 3660 ntBASIC14.63□□□□□ -0.07
FREM3P0C091 PCBP4-202ENST00000355852 2015 ntAPPRIS P1 TSL 1 (best) BASIC14.63□□□□□ -0.07
FREM3P0C091 PRAL-201ENST00000624952 3286 ntBASIC14.63□□□□□ -0.07
FREM3P0C091 AATK-201ENST00000326724 5257 ntAPPRIS P3 TSL 5 BASIC14.63□□□□□ -0.07
FREM3P0C091 GFM1-208ENST00000478576 2147 ntTSL 2 BASIC14.63□□□□□ -0.07
FREM3P0C091 WBP2-204ENST00000585462 1895 ntTSL 3 BASIC14.63□□□□□ -0.07
FREM3P0C091 PRSS50-201ENST00000460241 2960 ntAPPRIS P1 TSL 2 BASIC14.63□□□□□ -0.07
FREM3P0C091 TYSND1-201ENST00000287078 3644 ntAPPRIS P1 TSL 1 (best) BASIC14.62□□□□□ -0.07
FREM3P0C091 LLGL2-201ENST00000167462 3480 ntTSL 1 (best) BASIC14.62□□□□□ -0.07
FREM3P0C091 CCDC110-201ENST00000307588 2898 ntAPPRIS P3 TSL 1 (best) BASIC14.62□□□□□ -0.07
FREM3P0C091 AL138694.1-201ENST00000637731 1689 ntAPPRIS P1 TSL 5 BASIC14.62□□□□□ -0.07
FREM3P0C091 ZNF131-214ENST00000509634 3340 ntAPPRIS P1 TSL 5 BASIC14.62□□□□□ -0.07
FREM3P0C091 TOM1L2-209ENST00000540946 1420 ntTSL 2 BASIC14.62□□□□□ -0.07
FREM3P0C091 GBA2-202ENST00000378094 3757 ntAPPRIS ALT2 TSL 1 (best) BASIC14.62□□□□□ -0.07
FREM3P0C091 AC006974.1-201ENST00000637928 1501 ntTSL 5 BASIC14.62□□□□□ -0.07
FREM3P0C091 DENND1A-202ENST00000373620 3612 ntAPPRIS ALT2 TSL 1 (best) BASIC14.62□□□□□ -0.07
FREM3P0C091 ZNF804A-201ENST00000302277 4690 ntAPPRIS P1 TSL 1 (best) BASIC14.62□□□□□ -0.07
FREM3P0C091 CTNNBIP1-203ENST00000377263 3000 ntAPPRIS P1 TSL 1 (best) BASIC14.62□□□□□ -0.07
FREM3P0C091 CLN3-201ENST00000333496 1608 ntTSL 5 BASIC14.62□□□□□ -0.07
FREM3P0C091 MIR155HG-201ENST00000456917 1600 ntTSL 5 BASIC14.62□□□□□ -0.07
FREM3P0C091 LRRC28-202ENST00000331450 752 ntTSL 1 (best) BASIC14.62□□□□□ -0.07
FREM3P0C091 HRCT1-201ENST00000354323 950 ntAPPRIS P1 BASIC14.62□□□□□ -0.07
FREM3P0C091 AC092910.3-202ENST00000469070 982 ntTSL 3 BASIC14.62□□□□□ -0.07
FREM3P0C091 COQ4-205ENST00000609948 956 ntTSL 2 BASIC14.62□□□□□ -0.07
FREM3P0C091 CD55-204ENST00000367064 2760 ntAPPRIS P3 TSL 1 (best) BASIC14.62□□□□□ -0.07
FREM3P0C091 POLR2A-201ENST00000572844 2083 ntAPPRIS P1 TSL 1 (best) BASIC14.62□□□□□ -0.07
FREM3P0C091 LONRF3-203ENST00000422289 2898 ntTSL 2 BASIC14.62□□□□□ -0.07
FREM3P0C091 CACNA1A-215ENST00000635727 7536 ntAPPRIS ALT2 TSL 5 BASIC14.62□□□□□ -0.07
FREM3P0C091 PPP6R1-201ENST00000412770 3961 ntAPPRIS P1 TSL 1 (best) BASIC14.62□□□□□ -0.07
FREM3P0C091 KIFC1-211ENST00000428849 2706 ntAPPRIS P1 TSL 1 (best) BASIC14.62□□□□□ -0.07
FREM3P0C091 RAC2-201ENST00000249071 1482 ntAPPRIS P2 TSL 1 (best) BASIC14.62□□□□□ -0.07
FREM3P0C091 ANKK1-201ENST00000303941 2543 ntAPPRIS P1 TSL 1 (best) BASIC14.62□□□□□ -0.07
FREM3P0C091 MMP2-201ENST00000219070 3741 ntAPPRIS P1 TSL 1 (best) BASIC14.62□□□□□ -0.07
FREM3P0C091 KLK10-202ENST00000358789 1508 ntAPPRIS P1 TSL 1 (best) BASIC14.62□□□□□ -0.07
FREM3P0C091 APH1A-204ENST00000414276 1718 ntTSL 2 BASIC14.62□□□□□ -0.07
FREM3P0C091 TSSK2-201ENST00000399635 1816 ntAPPRIS P1 BASIC14.62□□□□□ -0.07
FREM3P0C091 TBC1D10A-203ENST00000403362 1833 ntAPPRIS ALT2 TSL 5 BASIC14.62□□□□□ -0.07
FREM3P0C091 C7orf31-201ENST00000283905 2673 ntAPPRIS P1 TSL 1 (best) BASIC14.62□□□□□ -0.07
FREM3P0C091 GPR162-202ENST00000382315 1150 ntTSL 1 (best) BASIC14.62□□□□□ -0.07
FREM3P0C091 AL445931.1-201ENST00000412181 2112 ntTSL 2 BASIC14.62□□□□□ -0.07
FREM3P0C091 LEPROTL1-202ENST00000442880 908 ntTSL 2 BASIC14.62□□□□□ -0.07
FREM3P0C091 ZNF324B-203ENST00000594214 564 ntTSL 2 BASIC14.62□□□□□ -0.07
FREM3P0C091 MECR-201ENST00000263702 1353 ntAPPRIS P1 TSL 1 (best) BASIC14.62□□□□□ -0.07
FREM3P0C091 LRP11-201ENST00000239367 3260 ntAPPRIS P1 TSL 1 (best) BASIC14.62□□□□□ -0.07
FREM3P0C091 TSPAN5-201ENST00000305798 3365 ntAPPRIS P1 TSL 1 (best) BASIC14.62□□□□□ -0.07
FREM3P0C091 TAGLN3-202ENST00000393917 1488 ntAPPRIS P1 TSL 5 BASIC14.62□□□□□ -0.07
FREM3P0C091 BMP1-201ENST00000306349 2626 ntTSL 1 (best) BASIC14.62□□□□□ -0.07
FREM3P0C091 USP27X-201ENST00000621775 2618 ntAPPRIS P1 BASIC14.62□□□□□ -0.07
FREM3P0C091 ATP6AP2-215ENST00000636409 1962 ntAPPRIS ALT2 TSL 2 BASIC14.61□□□□□ -0.07
FREM3P0C091 NUCB1-202ENST00000407032 2158 ntAPPRIS P2 TSL 5 BASIC14.61□□□□□ -0.07
FREM3P0C091 DDX5-201ENST00000225792 2554 ntAPPRIS P1 TSL 1 (best) BASIC14.61□□□□□ -0.07
FREM3P0C091 RNLS-201ENST00000331772 1447 ntAPPRIS P1 TSL 1 (best) BASIC14.61□□□□□ -0.07
FREM3P0C091 RABEP1-202ENST00000537505 5365 ntAPPRIS P1 TSL 1 (best) BASIC14.61□□□□□ -0.07
FREM3P0C091 C14orf93-202ENST00000341470 2221 ntTSL 1 (best) BASIC14.61□□□□□ -0.07
FREM3P0C091 MTHFD1L-203ENST00000367321 3604 ntAPPRIS P3 TSL 1 (best) BASIC14.61□□□□□ -0.07
FREM3P0C091 PLPPR5-201ENST00000263177 3288 ntAPPRIS P4 TSL 1 (best) BASIC14.61□□□□□ -0.07
FREM3P0C091 MAP4K1-208ENST00000589130 2654 ntTSL 5 BASIC14.61□□□□□ -0.07
FREM3P0C091 SAE1-202ENST00000392776 1851 ntTSL 3 BASIC14.61□□□□□ -0.07
FREM3P0C091 ESR2-209ENST00000555278 1883 ntTSL 1 (best) BASIC14.61□□□□□ -0.07
FREM3P0C091 GAREM2-202ENST00000407684 5138 ntTSL 2 BASIC14.61□□□□□ -0.07
FREM3P0C091 OLA1-202ENST00000344357 1656 ntTSL 2 BASIC14.61□□□□□ -0.07
FREM3P0C091 FBXO22-202ENST00000453211 1486 ntTSL 2 BASIC14.61□□□□□ -0.07
FREM3P0C091 SLC7A15P-201ENST00000424028 1363 ntBASIC14.61□□□□□ -0.07
FREM3P0C091 TMEM41A-201ENST00000296254 1060 ntTSL 2 BASIC14.61□□□□□ -0.07
FREM3P0C091 LINC00659-201ENST00000412500 540 ntTSL 1 (best) BASIC14.61□□□□□ -0.07
FREM3P0C091 PSEN2-206ENST00000472139 1163 ntTSL 5 BASIC14.61□□□□□ -0.07
FREM3P0C091 MIR210HG-203ENST00000533920 816 ntTSL 2 BASIC14.61□□□□□ -0.07
FREM3P0C091 TMEM63A-209ENST00000537914 1018 ntTSL 1 (best) BASIC14.61□□□□□ -0.07
FREM3P0C091 SUOX-214ENST00000551841 906 ntTSL 3 BASIC14.61□□□□□ -0.07
FREM3P0C091 HIST1H3D-202ENST00000635200 948 ntAPPRIS P1 TSL 3 BASIC14.61□□□□□ -0.07
FREM3P0C091 DACT1-202ENST00000395153 3734 ntAPPRIS ALT2 TSL 5 BASIC14.61□□□□□ -0.07
FREM3P0C091 MINDY1-201ENST00000312210 2400 ntTSL 2 BASIC14.61□□□□□ -0.07
FREM3P0C091 TRAPPC11-201ENST00000334690 4552 ntAPPRIS P1 TSL 1 (best) BASIC14.61□□□□□ -0.07
FREM3P0C091 ZIC1-201ENST00000282928 5241 ntAPPRIS P1 TSL 1 (best) BASIC14.61□□□□□ -0.07
FREM3P0C091 RGS7-203ENST00000366564 2295 ntAPPRIS ALT2 TSL 1 (best) BASIC14.61□□□□□ -0.07
Retrieved 100 of 98,524 protein–RNA pairs in 26.6 ms