Protein–RNA interactions for Protein: O43707

ACTN4, Alpha-actinin-4, humanhuman

Known RBP Predictions only

Length 911 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ACTN4O43707 PRR22-202ENST00000419421 1392 ntAPPRIS P1 TSL 2 BASIC18.09■□□□□ 0.49
ACTN4O43707 IFRD1-202ENST00000403825 2290 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
ACTN4O43707 ACOX3-203ENST00000503233 2253 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
ACTN4O43707 PNRC1-202ENST00000354922 1345 ntTSL 1 (best) BASIC18.09■□□□□ 0.49
ACTN4O43707 AC007182.1-201ENST00000455232 2159 ntTSL 1 (best) BASIC18.09■□□□□ 0.49
ACTN4O43707 AC009237.3-202ENST00000608013 3042 ntTSL 1 (best) BASIC18.09■□□□□ 0.49
ACTN4O43707 PTPRN2-205ENST00000409483 4711 ntAPPRIS ALT2 TSL 2 BASIC18.09■□□□□ 0.49
ACTN4O43707 FCN2-201ENST00000291744 1057 ntAPPRIS P2 TSL 1 (best) BASIC18.09■□□□□ 0.49
ACTN4O43707 CCDC12-201ENST00000292314 1017 ntTSL 5 BASIC18.09■□□□□ 0.49
ACTN4O43707 LTC4S-201ENST00000292596 666 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
ACTN4O43707 MUC1-204ENST00000343256 648 ntTSL 1 (best) BASIC18.09■□□□□ 0.49
ACTN4O43707 LCE1B-201ENST00000360090 1139 ntAPPRIS P1 BASIC18.09■□□□□ 0.49
ACTN4O43707 TEX30-202ENST00000376021 1038 ntTSL 2 BASIC18.09■□□□□ 0.49
ACTN4O43707 TEX30-206ENST00000376032 1165 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
ACTN4O43707 AMACR-204ENST00000382085 1195 ntTSL 1 (best) BASIC18.09■□□□□ 0.49
ACTN4O43707 ITGB2-204ENST00000397846 422 ntTSL 2 BASIC18.09■□□□□ 0.49
ACTN4O43707 AC006042.2-201ENST00000428660 568 ntTSL 4 BASIC18.09■□□□□ 0.49
ACTN4O43707 FAM58CP-201ENST00000435741 640 ntBASIC18.09■□□□□ 0.49
ACTN4O43707 AL049569.1-201ENST00000446261 636 ntTSL 3 BASIC18.09■□□□□ 0.49
ACTN4O43707 AP001471.1-201ENST00000454245 672 ntTSL 3 BASIC18.09■□□□□ 0.49
ACTN4O43707 HOXC-AS3-202ENST00000513165 533 ntTSL 3 BASIC18.09■□□□□ 0.49
ACTN4O43707 AC012173.1-201ENST00000567942 430 ntTSL 3 BASIC18.09■□□□□ 0.49
ACTN4O43707 SHISA5-210ENST00000444115 2081 ntTSL 2 BASIC18.09■□□□□ 0.49
ACTN4O43707 ZNF786-202ENST00000491431 2874 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
ACTN4O43707 AC009242.1-201ENST00000634300 2706 ntTSL 5 BASIC18.09■□□□□ 0.49
ACTN4O43707 TLE3-202ENST00000440567 2657 ntTSL 2 BASIC18.09■□□□□ 0.49
ACTN4O43707 ILF3-210ENST00000588657 2697 ntAPPRIS ALT2 TSL 5 BASIC18.09■□□□□ 0.49
ACTN4O43707 CNOT10-202ENST00000331889 2573 ntTSL 1 (best) BASIC18.09■□□□□ 0.49
ACTN4O43707 AQP3-201ENST00000297991 1849 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
ACTN4O43707 EML3-202ENST00000394773 3256 ntAPPRIS P2 TSL 1 (best) BASIC18.09■□□□□ 0.49
ACTN4O43707 TUBB3-201ENST00000315491 1769 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
ACTN4O43707 C1QTNF2-201ENST00000393975 2414 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
ACTN4O43707 SLC25A45-214ENST00000534028 2432 ntTSL 1 (best) BASIC18.09■□□□□ 0.49
ACTN4O43707 NOMO1-207ENST00000610363 3765 ntAPPRIS ALT2 TSL 1 (best) BASIC18.09■□□□□ 0.49
ACTN4O43707 PAAF1-205ENST00000535604 1695 ntTSL 5 BASIC18.09■□□□□ 0.49
ACTN4O43707 CLIP4-201ENST00000320081 4293 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
ACTN4O43707 SLC4A3-204ENST00000373760 4134 ntAPPRIS P1 TSL 5 BASIC18.08■□□□□ 0.49
ACTN4O43707 KLK10-202ENST00000358789 1508 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.49
ACTN4O43707 LYNX1-206ENST00000621401 4537 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.49
ACTN4O43707 BRSK2-204ENST00000526678 2091 ntAPPRIS ALT2 TSL 1 (best) BASIC18.08■□□□□ 0.49
ACTN4O43707 RGL3-201ENST00000380456 2542 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.49
ACTN4O43707 CGREF1-205ENST00000404694 1376 ntAPPRIS ALT2 TSL 2 BASIC18.08■□□□□ 0.49
ACTN4O43707 EIF5A-206ENST00000571955 1366 ntAPPRIS P1 TSL 5 BASIC18.08■□□□□ 0.49
ACTN4O43707 KLK5-203ENST00000593428 1365 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.49
ACTN4O43707 LDLR-204ENST00000545707 2429 ntTSL 2 BASIC18.08■□□□□ 0.49
ACTN4O43707 PDK2-201ENST00000007708 2384 ntTSL 2 BASIC18.08■□□□□ 0.48
ACTN4O43707 SEPT8-205ENST00000378701 1817 ntTSL 2 BASIC18.08■□□□□ 0.48
ACTN4O43707 TPM2-201ENST00000329305 1018 ntAPPRIS ALT1 TSL 2 BASIC18.08■□□□□ 0.48
ACTN4O43707 PDLIM7-201ENST00000355572 977 ntTSL 1 (best) BASIC18.08■□□□□ 0.48
ACTN4O43707 DDIT4-AS1-201ENST00000491934 847 ntTSL 5 BASIC18.08■□□□□ 0.48
ACTN4O43707 PGAM5P1-201ENST00000518923 814 ntBASIC18.08■□□□□ 0.48
ACTN4O43707 MTX1-207ENST00000609421 1085 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.48
ACTN4O43707 CKMT1B-215ENST00000627381 1074 ntTSL 5 BASIC18.08■□□□□ 0.48
ACTN4O43707 DUSP13-203ENST00000372702 1778 ntAPPRIS ALT1 TSL 1 (best) BASIC18.08■□□□□ 0.48
ACTN4O43707 SFXN1-201ENST00000321442 4231 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.48
ACTN4O43707 TAPBPL-201ENST00000266556 1741 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.48
ACTN4O43707 ATP2C1-224ENST00000533801 3690 ntTSL 1 (best) BASIC18.08■□□□□ 0.48
ACTN4O43707 AP000704.1-201ENST00000637940 2182 ntTSL 5 BASIC18.08■□□□□ 0.48
ACTN4O43707 APBB2-204ENST00000502841 1681 ntTSL 2 BASIC18.08■□□□□ 0.48
ACTN4O43707 SPATA20-202ENST00000356488 2634 ntTSL 1 (best) BASIC18.08■□□□□ 0.48
ACTN4O43707 UBE2D1-204ENST00000615793 2621 ntTSL 2 BASIC18.08■□□□□ 0.48
ACTN4O43707 RTL6-201ENST00000341255 5495 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.48
ACTN4O43707 LOX-206ENST00000639739 1626 ntTSL 5 BASIC18.08■□□□□ 0.48
ACTN4O43707 TMEM132D-202ENST00000422113 5776 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.48
ACTN4O43707 LFNG-204ENST00000402045 2058 ntTSL 1 (best) BASIC18.08■□□□□ 0.48
ACTN4O43707 ADAMTS1-201ENST00000284984 5191 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.48
ACTN4O43707 AGPAT1-202ENST00000375104 2017 ntAPPRIS P1 TSL 2 BASIC18.08■□□□□ 0.48
ACTN4O43707 PDE8B-201ENST00000264917 5956 ntAPPRIS P3 TSL 1 (best) BASIC18.08■□□□□ 0.48
ACTN4O43707 TMEM140-201ENST00000275767 1997 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.48
ACTN4O43707 RSRP1-202ENST00000431849 1954 ntAPPRIS ALT2 TSL 1 (best) BASIC18.08■□□□□ 0.48
ACTN4O43707 TMPRSS13-203ENST00000524993 1950 ntAPPRIS P3 TSL 1 (best) BASIC18.08■□□□□ 0.48
ACTN4O43707 TLE4-204ENST00000376537 2793 ntTSL 1 (best) BASIC18.08■□□□□ 0.48
ACTN4O43707 MED26-201ENST00000263390 3174 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
ACTN4O43707 IRX6-201ENST00000290552 3128 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
ACTN4O43707 EPS8L2-201ENST00000318562 3148 ntAPPRIS P2 TSL 1 (best) BASIC18.07■□□□□ 0.48
ACTN4O43707 SYDE1-204ENST00000600440 3058 ntTSL 1 (best) BASIC18.07■□□□□ 0.48
ACTN4O43707 AL691432.1-201ENST00000596308 1422 ntBASIC18.07■□□□□ 0.48
ACTN4O43707 AC103702.1-201ENST00000548801 2630 ntBASIC18.07■□□□□ 0.48
ACTN4O43707 STT3B-201ENST00000295770 4248 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
ACTN4O43707 AC100803.3-201ENST00000606664 2961 ntTSL 5 BASIC18.07■□□□□ 0.48
ACTN4O43707 P3H1-202ENST00000296388 2585 ntAPPRIS P3 TSL 1 (best) BASIC18.07■□□□□ 0.48
ACTN4O43707 CDH1-202ENST00000422392 2567 ntTSL 1 (best) BASIC18.07■□□□□ 0.48
ACTN4O43707 FAM218A-201ENST00000513876 2175 ntAPPRIS P1 BASIC18.07■□□□□ 0.48
ACTN4O43707 C9orf78-201ENST00000372447 1795 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
ACTN4O43707 MECR-201ENST00000263702 1353 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
ACTN4O43707 MEX3A-202ENST00000532414 6124 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
ACTN4O43707 STAT6-225ENST00000640254 2037 ntTSL 5 BASIC18.07■□□□□ 0.48
ACTN4O43707 PDZRN3-201ENST00000263666 4248 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
ACTN4O43707 IMP4-203ENST00000409935 958 ntTSL 5 BASIC18.07■□□□□ 0.48
ACTN4O43707 AP000695.1-201ENST00000429588 893 ntTSL 3 BASIC18.07■□□□□ 0.48
ACTN4O43707 TTC28-AS1-213ENST00000434221 972 ntTSL 3 BASIC18.07■□□□□ 0.48
ACTN4O43707 SLC50A1-209ENST00000484157 886 ntTSL 3 BASIC18.07■□□□□ 0.48
ACTN4O43707 LINC01485-205ENST00000523617 586 ntTSL 2 BASIC18.07■□□□□ 0.48
ACTN4O43707 RAB1B-202ENST00000527397 991 ntTSL 3 BASIC18.07■□□□□ 0.48
ACTN4O43707 LINC01225-203ENST00000563550 1244 ntBASIC18.07■□□□□ 0.48
ACTN4O43707 C19orf70-206ENST00000590389 769 ntTSL 3 BASIC18.07■□□□□ 0.48
ACTN4O43707 ZNF773-202ENST00000593916 548 ntTSL 3 BASIC18.07■□□□□ 0.48
ACTN4O43707 PLVAP-201ENST00000252590 2305 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
ACTN4O43707 EIF4G1-204ENST00000352767 5484 ntTSL 1 (best) BASIC18.07■□□□□ 0.48
ACTN4O43707 AHRR-201ENST00000316418 5661 ntAPPRIS P3 TSL 1 (best) BASIC18.07■□□□□ 0.48
Retrieved 100 of 98,524 protein–RNA pairs in 58.6 ms