Protein–RNA interactions for Protein: O00526

UPK2, Uroplakin-2, humanhuman

Predictions only

Length 184 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
UPK2O00526 Z98749.3-201ENST00000400206 1770 ntAPPRIS P1 TSL 2 BASIC12.97□□□□□ -0.33
UPK2O00526 RNPS1-223ENST00000568631 1792 ntAPPRIS P1 TSL 5 BASIC12.97□□□□□ -0.33
UPK2O00526 NAA50-209ENST00000497525 1385 ntTSL 2 BASIC12.97□□□□□ -0.33
UPK2O00526 TATDN3-214ENST00000532324 1381 ntTSL 2 BASIC12.97□□□□□ -0.33
UPK2O00526 SIRT6-214ENST00000601488 1361 ntTSL 3 BASIC12.97□□□□□ -0.33
UPK2O00526 RGL3-201ENST00000380456 2542 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
UPK2O00526 C14orf79-205ENST00000549240 2503 ntAPPRIS ALT2 TSL 2 BASIC12.97□□□□□ -0.33
UPK2O00526 EML3-202ENST00000394773 3256 ntAPPRIS P2 TSL 1 (best) BASIC12.97□□□□□ -0.33
UPK2O00526 TAPBPL-201ENST00000266556 1741 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
UPK2O00526 GLUD2-201ENST00000328078 2493 ntAPPRIS P1 BASIC12.97□□□□□ -0.33
UPK2O00526 GPAT2-204ENST00000453542 2466 ntTSL 2 BASIC12.97□□□□□ -0.33
UPK2O00526 C11orf24-201ENST00000304271 2063 ntAPPRIS P3 TSL 1 (best) BASIC12.97□□□□□ -0.33
UPK2O00526 LIM2-201ENST00000221973 983 ntTSL 1 (best) BASIC12.97□□□□□ -0.33
UPK2O00526 RAMP1-201ENST00000254661 910 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
UPK2O00526 LCE1F-201ENST00000334371 357 ntAPPRIS P1 BASIC12.97□□□□□ -0.33
UPK2O00526 WWOX-201ENST00000355860 710 ntTSL 1 (best) BASIC12.97□□□□□ -0.33
UPK2O00526 AC062015.1-201ENST00000423838 1134 ntTSL 1 (best) BASIC12.97□□□□□ -0.33
UPK2O00526 SNHG7-203ENST00000436596 509 ntTSL 2 BASIC12.97□□□□□ -0.33
UPK2O00526 AC009078.2-202ENST00000463353 338 ntBASIC12.97□□□□□ -0.33
UPK2O00526 AP001107.2-202ENST00000528650 480 ntTSL 3 BASIC12.97□□□□□ -0.33
UPK2O00526 MRVI1-AS1-203ENST00000529979 784 ntTSL 3 BASIC12.97□□□□□ -0.33
UPK2O00526 AC135586.2-201ENST00000537262 567 ntAPPRIS P1 TSL 4 BASIC12.97□□□□□ -0.33
UPK2O00526 AC034105.1-201ENST00000563488 319 ntBASIC12.97□□□□□ -0.33
UPK2O00526 AC068137.2-201ENST00000605408 478 ntBASIC12.97□□□□□ -0.33
UPK2O00526 LINC01197-204ENST00000611265 956 ntTSL 5 BASIC12.97□□□□□ -0.33
UPK2O00526 HOXA11-AS1_5.1-201ENST00000620211 203 ntBASIC12.97□□□□□ -0.33
UPK2O00526 TMEM114-205ENST00000624696 560 ntTSL 2 BASIC12.97□□□□□ -0.33
UPK2O00526 SYDE1-204ENST00000600440 3058 ntTSL 1 (best) BASIC12.97□□□□□ -0.33
UPK2O00526 AC009802.1-201ENST00000637973 1609 ntTSL 5 BASIC12.97□□□□□ -0.33
UPK2O00526 USP45-201ENST00000327681 6255 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
UPK2O00526 SLC5A7-201ENST00000264047 5152 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
UPK2O00526 MDFIC-202ENST00000393486 4393 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
UPK2O00526 DHX40-202ENST00000425628 2255 ntTSL 2 BASIC12.97□□□□□ -0.33
UPK2O00526 PRSS50-201ENST00000460241 2960 ntAPPRIS P1 TSL 2 BASIC12.97□□□□□ -0.33
UPK2O00526 POLI-208ENST00000579534 6133 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
UPK2O00526 POLR1D-212ENST00000630983 1931 ntTSL 5 BASIC12.97□□□□□ -0.33
UPK2O00526 WNT2-201ENST00000265441 2907 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
UPK2O00526 ELFN2-201ENST00000402918 8361 ntAPPRIS P1 TSL 4 BASIC12.97□□□□□ -0.33
UPK2O00526 MRPS22-212ENST00000495075 1547 ntAPPRIS P2 TSL 1 (best) BASIC12.97□□□□□ -0.33
UPK2O00526 ZNF767P-201ENST00000463567 3520 ntTSL 2 BASIC12.97□□□□□ -0.33
UPK2O00526 MAGEA12-202ENST00000393869 1761 ntAPPRIS P1 TSL 2 BASIC12.97□□□□□ -0.33
UPK2O00526 ATP2C1-224ENST00000533801 3690 ntTSL 1 (best) BASIC12.97□□□□□ -0.33
UPK2O00526 DBNDD1-202ENST00000304733 2081 ntTSL 1 (best) BASIC12.97□□□□□ -0.33
UPK2O00526 SOX14-201ENST00000306087 2055 ntAPPRIS P1 BASIC12.97□□□□□ -0.33
UPK2O00526 IQCE-204ENST00000404984 2086 ntAPPRIS ALT2 TSL 5 BASIC12.97□□□□□ -0.33
UPK2O00526 SLC43A1-204ENST00000528450 2358 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.33
UPK2O00526 SATB2-206ENST00000457245 2656 ntAPPRIS P1 TSL 2 BASIC12.96□□□□□ -0.33
UPK2O00526 ADSL-220ENST00000636714 1734 ntAPPRIS ALT1 TSL 5 BASIC12.96□□□□□ -0.33
UPK2O00526 DEPDC7-202ENST00000311388 2012 ntTSL 1 (best) BASIC12.96□□□□□ -0.33
UPK2O00526 TBC1D17-202ENST00000535102 2025 ntTSL 2 BASIC12.96□□□□□ -0.33
UPK2O00526 SNRPF-201ENST00000266735 1389 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.33
UPK2O00526 TUBA4B-203ENST00000490341 1380 ntAPPRIS P1 TSL 2 BASIC12.96□□□□□ -0.33
UPK2O00526 WASHC2C-208ENST00000537517 4417 ntAPPRIS ALT2 TSL 2 BASIC12.96□□□□□ -0.33
UPK2O00526 SF3A2-201ENST00000221494 1963 ntAPPRIS P2 TSL 1 (best) BASIC12.96□□□□□ -0.33
UPK2O00526 GDF2-201ENST00000581492 1955 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.33
UPK2O00526 RASGRF1-203ENST00000558480 6237 ntAPPRIS P1 TSL 2 BASIC12.96□□□□□ -0.33
UPK2O00526 CACFD1-206ENST00000540581 2880 ntAPPRIS ALT2 TSL 2 BASIC12.96□□□□□ -0.33
UPK2O00526 NOMO2-203ENST00000543392 3765 ntAPPRIS ALT2 TSL 1 (best) BASIC12.96□□□□□ -0.33
UPK2O00526 FAM160B1-202ENST00000369248 5810 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.33
UPK2O00526 LMAN1-201ENST00000251047 5521 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.33
UPK2O00526 SERAC1-201ENST00000367101 1907 ntTSL 5 BASIC12.96□□□□□ -0.33
UPK2O00526 ALMS1P1-202ENST00000450720 1601 ntTSL 1 (best) BASIC12.96□□□□□ -0.33
UPK2O00526 LOX-206ENST00000639739 1626 ntTSL 5 BASIC12.96□□□□□ -0.33
UPK2O00526 FRA10AC1-201ENST00000359204 3089 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.33
UPK2O00526 MYH14-210ENST00000601313 6896 ntAPPRIS ALT2 TSL 1 (best) BASIC12.96□□□□□ -0.33
UPK2O00526 CACFD1-207ENST00000542192 2754 ntTSL 2 BASIC12.96□□□□□ -0.33
UPK2O00526 AC020658.6-201ENST00000623564 1870 ntBASIC12.96□□□□□ -0.33
UPK2O00526 TEKT4P2-201ENST00000416067 1599 ntTSL 1 (best) BASIC12.96□□□□□ -0.33
UPK2O00526 HBQ1-201ENST00000199708 536 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.33
UPK2O00526 ATP23-201ENST00000300145 1245 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.33
UPK2O00526 DBN1-202ENST00000309007 2995 ntAPPRIS ALT2 TSL 1 (best) BASIC12.96□□□□□ -0.33
UPK2O00526 RNF151-201ENST00000321392 786 ntAPPRIS ALT2 TSL 1 (best) BASIC12.96□□□□□ -0.33
UPK2O00526 C22orf39-201ENST00000333059 1221 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.33
UPK2O00526 UFD1-202ENST00000399523 1007 ntTSL 1 (best) BASIC12.96□□□□□ -0.33
UPK2O00526 TMEM139-205ENST00000410004 2114 ntAPPRIS P1 TSL 2 BASIC12.96□□□□□ -0.33
UPK2O00526 GPX1P2-201ENST00000429271 606 ntBASIC12.96□□□□□ -0.33
UPK2O00526 TPM4P1-201ENST00000436100 807 ntBASIC12.96□□□□□ -0.33
UPK2O00526 KRT18P2-201ENST00000447938 1258 ntBASIC12.96□□□□□ -0.33
UPK2O00526 AC074386.1-202ENST00000463561 864 ntBASIC12.96□□□□□ -0.33
UPK2O00526 TNFSF13-208ENST00000483039 959 ntTSL 2 BASIC12.96□□□□□ -0.33
UPK2O00526 SNHG6-201ENST00000520348 648 ntTSL 2 BASIC12.96□□□□□ -0.33
UPK2O00526 AP006621.3-203ENST00000525941 610 ntTSL 2 BASIC12.96□□□□□ -0.33
UPK2O00526 BLOC1S1-201ENST00000547076 837 ntTSL 2 BASIC12.96□□□□□ -0.33
UPK2O00526 AC021066.1-201ENST00000549788 647 ntTSL 3 BASIC12.96□□□□□ -0.33
UPK2O00526 RNF151-203ENST00000569714 796 ntAPPRIS P2 TSL 1 (best) BASIC12.96□□□□□ -0.33
UPK2O00526 UBE3D-208ENST00000626828 114 ntTSL 5 BASIC12.96□□□□□ -0.33
UPK2O00526 AC073324.2-201ENST00000626532 2941 ntTSL 4 BASIC12.96□□□□□ -0.33
UPK2O00526 SIN3B-202ENST00000379803 5129 ntAPPRIS P3 TSL 1 (best) BASIC12.96□□□□□ -0.33
UPK2O00526 NUDT16-203ENST00000537561 5943 ntTSL 5 BASIC12.96□□□□□ -0.33
UPK2O00526 TRAF3-204ENST00000539721 1786 ntTSL 2 BASIC12.96□□□□□ -0.34
UPK2O00526 LINC02495-201ENST00000508601 4167 ntTSL 2 BASIC12.96□□□□□ -0.34
UPK2O00526 POLR3D-202ENST00000397802 5494 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.34
UPK2O00526 TRPV4-204ENST00000536838 2514 ntTSL 1 (best) BASIC12.96□□□□□ -0.34
UPK2O00526 MMADHC-203ENST00000428879 1726 ntAPPRIS P1 TSL 2 BASIC12.96□□□□□ -0.34
UPK2O00526 ARPC1B-211ENST00000451682 1715 ntAPPRIS P1 TSL 5 BASIC12.96□□□□□ -0.34
UPK2O00526 TIPRL-202ENST00000367833 3032 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.34
UPK2O00526 SLC1A7-204ENST00000611397 2499 ntTSL 1 (best) BASIC12.96□□□□□ -0.34
UPK2O00526 PPP1R18-206ENST00000615892 1448 ntTSL 1 (best) BASIC12.96□□□□□ -0.34
UPK2O00526 MARK3-204ENST00000416682 2969 ntTSL 1 (best) BASIC12.96□□□□□ -0.34
UPK2O00526 PITPNM1-202ENST00000436757 4216 ntAPPRIS ALT1 TSL 1 (best) BASIC12.96□□□□□ -0.34
Retrieved 100 of 98,524 protein–RNA pairs in 65.2 ms