Protein–RNA interactions for Protein: Q9HBT6

CDH20, Cadherin-20, humanhuman

Predictions only

Length 801 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDH20Q9HBT6 CES4A-206ENST00000540579 1825 ntTSL 1 (best) BASIC14.18□□□□□ -0.14
CDH20Q9HBT6 PHF23-202ENST00000454255 1662 ntTSL 2 BASIC14.18□□□□□ -0.14
CDH20Q9HBT6 BMP4-201ENST00000245451 1917 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
CDH20Q9HBT6 SNED1-202ENST00000342631 1930 ntTSL 1 (best) BASIC14.18□□□□□ -0.14
CDH20Q9HBT6 CCDC116-203ENST00000607942 1913 ntAPPRIS ALT2 TSL 2 BASIC14.18□□□□□ -0.14
CDH20Q9HBT6 CCNL1-201ENST00000295925 549 ntTSL 1 (best) BASIC14.18□□□□□ -0.14
CDH20Q9HBT6 H2AFZ-201ENST00000296417 979 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
CDH20Q9HBT6 PHF19-201ENST00000312189 836 ntTSL 1 (best) BASIC14.18□□□□□ -0.14
CDH20Q9HBT6 METTL26-202ENST00000338401 544 ntTSL 1 (best) BASIC14.18□□□□□ -0.14
CDH20Q9HBT6 LCN2-203ENST00000373017 848 ntAPPRIS P2 TSL 5 BASIC14.18□□□□□ -0.14
CDH20Q9HBT6 NDUFAF3-203ENST00000395458 808 ntTSL 2 BASIC14.18□□□□□ -0.14
CDH20Q9HBT6 LINC00404-201ENST00000418660 428 ntTSL 2 BASIC14.18□□□□□ -0.14
CDH20Q9HBT6 C6orf47-AS1-203ENST00000422049 673 ntTSL 2 BASIC14.18□□□□□ -0.14
CDH20Q9HBT6 SLC30A5-203ENST00000502979 681 ntTSL 1 (best) BASIC14.18□□□□□ -0.14
CDH20Q9HBT6 RNA5SP410-201ENST00000516285 106 ntBASIC14.18□□□□□ -0.14
CDH20Q9HBT6 SLC25A39P2-201ENST00000537614 270 ntBASIC14.18□□□□□ -0.14
CDH20Q9HBT6 PXN-AS1-202ENST00000538804 508 ntTSL 4 BASIC14.18□□□□□ -0.14
CDH20Q9HBT6 CMTM3-205ENST00000562707 714 ntAPPRIS P1 TSL 3 BASIC14.18□□□□□ -0.14
CDH20Q9HBT6 LINC01225-203ENST00000563550 1244 ntBASIC14.18□□□□□ -0.14
CDH20Q9HBT6 FHL2-212ENST00000607522 759 ntTSL 2 BASIC14.18□□□□□ -0.14
CDH20Q9HBT6 EIF2B4-212ENST00000622434 1771 ntTSL 5 BASIC14.18□□□□□ -0.14
CDH20Q9HBT6 HOXB5-201ENST00000239151 2041 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
CDH20Q9HBT6 SEMA3G-201ENST00000231721 4899 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
CDH20Q9HBT6 CTPS2-201ENST00000359276 3629 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
CDH20Q9HBT6 SCP2-201ENST00000371509 1889 ntTSL 1 (best) BASIC14.18□□□□□ -0.14
CDH20Q9HBT6 HDAC8-206ENST00000373571 2133 ntTSL 5 BASIC14.18□□□□□ -0.14
CDH20Q9HBT6 SPAG9-222ENST00000618113 8246 ntAPPRIS ALT1 TSL 5 BASIC14.18□□□□□ -0.14
CDH20Q9HBT6 CNTNAP3B-201ENST00000276974 3240 ntTSL 5 BASIC14.18□□□□□ -0.14
CDH20Q9HBT6 AL121758.1-201ENST00000488788 2714 ntAPPRIS P1 TSL 2 BASIC14.18□□□□□ -0.14
CDH20Q9HBT6 PODNL1-204ENST00000538517 2744 ntTSL 2 BASIC14.18□□□□□ -0.14
CDH20Q9HBT6 CENPN-202ENST00000305850 2481 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
CDH20Q9HBT6 DYSF-201ENST00000258104 6796 ntAPPRIS P3 TSL 1 (best) BASIC14.18□□□□□ -0.14
CDH20Q9HBT6 DYSF-204ENST00000409582 6790 ntAPPRIS ALT2 TSL 1 (best) BASIC14.18□□□□□ -0.14
CDH20Q9HBT6 DYSF-210ENST00000413539 6769 ntAPPRIS ALT2 TSL 1 (best) BASIC14.18□□□□□ -0.14
CDH20Q9HBT6 MIB2-217ENST00000504599 3311 ntAPPRIS ALT2 TSL 2 BASIC14.18□□□□□ -0.14
CDH20Q9HBT6 FUNDC2-201ENST00000369498 6455 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
CDH20Q9HBT6 OPCML-202ENST00000374778 1302 ntTSL 1 (best) BASIC14.17□□□□□ -0.14
CDH20Q9HBT6 EPHB4-201ENST00000358173 4329 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
CDH20Q9HBT6 NCALD-217ENST00000521599 2289 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
CDH20Q9HBT6 AL138694.1-201ENST00000637731 1689 ntAPPRIS P1 TSL 5 BASIC14.17□□□□□ -0.14
CDH20Q9HBT6 PBX1-219ENST00000560641 3225 ntTSL 5 BASIC14.17□□□□□ -0.14
CDH20Q9HBT6 TBC1D16-209ENST00000576768 6342 ntTSL 1 (best) BASIC14.17□□□□□ -0.14
CDH20Q9HBT6 HNF1A-212ENST00000544413 2014 ntTSL 1 (best) BASIC14.17□□□□□ -0.14
CDH20Q9HBT6 GDF11-201ENST00000257868 8657 ntAPPRIS P2 TSL 1 (best) BASIC14.17□□□□□ -0.14
CDH20Q9HBT6 ADD1-201ENST00000264758 4045 ntAPPRIS P3 TSL 5 BASIC14.17□□□□□ -0.14
CDH20Q9HBT6 GPX3-210ENST00000622181 1757 ntAPPRIS ALT1 TSL 5 BASIC14.17□□□□□ -0.14
CDH20Q9HBT6 SH3BP5-202ENST00000383791 2822 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
CDH20Q9HBT6 DLG4-201ENST00000302955 3184 ntAPPRIS P3 TSL 5 BASIC14.17□□□□□ -0.14
CDH20Q9HBT6 PHKG2-201ENST00000328273 1536 ntAPPRIS ALT1 TSL 5 BASIC14.17□□□□□ -0.14
CDH20Q9HBT6 GSKIP-205ENST00000555181 2218 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
CDH20Q9HBT6 TMEM270-201ENST00000320531 854 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
CDH20Q9HBT6 STOML1-203ENST00000359750 984 ntTSL 1 (best) BASIC14.17□□□□□ -0.14
CDH20Q9HBT6 AMACR-202ENST00000382068 862 ntTSL 1 (best) BASIC14.17□□□□□ -0.14
CDH20Q9HBT6 HLA-H-201ENST00000383620 1096 ntBASIC14.17□□□□□ -0.14
CDH20Q9HBT6 YWHAZ-203ENST00000395951 964 ntAPPRIS P1 TSL 2 BASIC14.17□□□□□ -0.14
CDH20Q9HBT6 SMAGP-202ENST00000398453 1062 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
CDH20Q9HBT6 AC142381.1-201ENST00000426099 345 ntBASIC14.17□□□□□ -0.14
CDH20Q9HBT6 AL135791.1-201ENST00000429214 826 ntTSL 5 BASIC14.17□□□□□ -0.14
CDH20Q9HBT6 ITPA-203ENST00000455664 729 ntTSL 1 (best) BASIC14.17□□□□□ -0.14
CDH20Q9HBT6 AC025183.1-201ENST00000506335 425 ntTSL 4 BASIC14.17□□□□□ -0.14
CDH20Q9HBT6 RPL13-214ENST00000567815 712 ntAPPRIS P1 TSL 3 BASIC14.17□□□□□ -0.14
CDH20Q9HBT6 AC024267.1-201ENST00000582320 895 ntBASIC14.17□□□□□ -0.14
CDH20Q9HBT6 AL365330.1-201ENST00000607459 531 ntBASIC14.17□□□□□ -0.14
CDH20Q9HBT6 ADAMTS15-201ENST00000299164 5673 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
CDH20Q9HBT6 TERT-202ENST00000334602 3210 ntAPPRIS ALT2 TSL 1 (best) BASIC14.17□□□□□ -0.14
CDH20Q9HBT6 MMRN2-201ENST00000372027 4375 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
CDH20Q9HBT6 PTGDR2-201ENST00000332539 2895 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
CDH20Q9HBT6 OAZ2-207ENST00000560258 1744 ntTSL 5 BASIC14.17□□□□□ -0.14
CDH20Q9HBT6 CLEC17A-202ENST00000417570 1399 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
CDH20Q9HBT6 EIF5A-206ENST00000571955 1366 ntAPPRIS P1 TSL 5 BASIC14.17□□□□□ -0.14
CDH20Q9HBT6 SLC3A2-203ENST00000377890 2161 ntTSL 1 (best) BASIC14.17□□□□□ -0.14
CDH20Q9HBT6 CDKN2B-AS1-208ENST00000580576 2175 ntTSL 1 (best) BASIC14.17□□□□□ -0.14
CDH20Q9HBT6 KCNQ2-236ENST00000637193 2983 ntTSL 5 BASIC14.17□□□□□ -0.14
CDH20Q9HBT6 SEPT8-205ENST00000378701 1817 ntTSL 2 BASIC14.17□□□□□ -0.14
CDH20Q9HBT6 ADAM6-201ENST00000606026 1843 ntTSL 2 BASIC14.17□□□□□ -0.14
CDH20Q9HBT6 AC092143.3-201ENST00000565150 1900 ntTSL 5 BASIC14.17□□□□□ -0.14
CDH20Q9HBT6 CYMP-AS1-201ENST00000457402 2351 ntTSL 1 (best) BASIC14.17□□□□□ -0.14
CDH20Q9HBT6 SEC63-201ENST00000369002 6411 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
CDH20Q9HBT6 SNAI2-201ENST00000020945 2010 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
CDH20Q9HBT6 NOX4-207ENST00000525196 1555 ntTSL 1 (best) BASIC14.17□□□□□ -0.14
CDH20Q9HBT6 SLC4A3-204ENST00000373760 4134 ntAPPRIS P1 TSL 5 BASIC14.17□□□□□ -0.14
CDH20Q9HBT6 JADE2-202ENST00000361895 3212 ntTSL 1 (best) BASIC14.17□□□□□ -0.14
CDH20Q9HBT6 CCNA2-202ENST00000618014 2797 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
CDH20Q9HBT6 PIGW-204ENST00000614443 2312 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
CDH20Q9HBT6 TMEM225B-202ENST00000431679 1314 ntAPPRIS P1 TSL 5 BASIC14.16□□□□□ -0.14
CDH20Q9HBT6 REXO1L8P-201ENST00000604378 1897 ntBASIC14.16□□□□□ -0.14
CDH20Q9HBT6 TACR3-201ENST00000304883 5190 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
CDH20Q9HBT6 HGNC:18790-202ENST00000421177 4172 ntAPPRIS P1 TSL 5 BASIC14.16□□□□□ -0.14
CDH20Q9HBT6 POLR2J4-203ENST00000326391 1422 ntTSL 1 (best) BASIC14.16□□□□□ -0.14
CDH20Q9HBT6 ADCY2-201ENST00000338316 6575 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
CDH20Q9HBT6 SH3YL1-206ENST00000405430 2064 ntAPPRIS P1 TSL 5 BASIC14.16□□□□□ -0.14
CDH20Q9HBT6 MEX3C-204ENST00000616921 3269 ntAPPRIS ALT2 TSL 1 (best) BASIC14.16□□□□□ -0.14
CDH20Q9HBT6 MRPS22-212ENST00000495075 1547 ntAPPRIS P2 TSL 1 (best) BASIC14.16□□□□□ -0.14
CDH20Q9HBT6 NDUFV1-216ENST00000529927 1503 ntAPPRIS ALT1 TSL 1 (best) BASIC14.16□□□□□ -0.14
CDH20Q9HBT6 AL589702.1-201ENST00000641229 1509 ntBASIC14.16□□□□□ -0.14
CDH20Q9HBT6 MYH6-201ENST00000356287 5871 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
CDH20Q9HBT6 MPP1-205ENST00000413259 2195 ntTSL 2 BASIC14.16□□□□□ -0.14
CDH20Q9HBT6 PRKCSH-205ENST00000587327 2189 ntAPPRIS ALT2 TSL 2 BASIC14.16□□□□□ -0.14
CDH20Q9HBT6 PGR-209ENST00000617858 2816 ntTSL 5 BASIC14.16□□□□□ -0.14
CDH20Q9HBT6 PLEKHA8P1-201ENST00000256692 1839 ntTSL 1 (best) BASIC14.16□□□□□ -0.14
Retrieved 100 of 98,524 protein–RNA pairs in 28.2 ms