Protein–RNA interactions for Protein: Q99743

NPAS2, Neuronal PAS domain-containing protein 2, humanhuman

Predictions only

Length 824 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NPAS2Q99743 CACNA1A-221ENST00000636012 7500 ntAPPRIS ALT2 TSL 5 BASIC15.88■□□□□ 0.13
NPAS2Q99743 ARID4B-202ENST00000349213 5811 ntTSL 1 (best) BASIC15.88■□□□□ 0.13
NPAS2Q99743 STUM-201ENST00000366788 7705 ntAPPRIS P2 TSL 5 BASIC15.88■□□□□ 0.13
NPAS2Q99743 PSMC3IP-204ENST00000587209 1381 ntTSL 1 (best) BASIC15.88■□□□□ 0.13
NPAS2Q99743 TXNDC2-206ENST00000611534 2066 ntAPPRIS ALT2 TSL 5 BASIC15.88■□□□□ 0.13
NPAS2Q99743 TLE4-204ENST00000376537 2793 ntTSL 1 (best) BASIC15.88■□□□□ 0.13
NPAS2Q99743 KCNG3-202ENST00000394973 3656 ntAPPRIS ALT1 TSL 1 (best) BASIC15.88■□□□□ 0.13
NPAS2Q99743 PSEN2-203ENST00000422240 1947 ntAPPRIS ALT1 TSL 2 BASIC15.88■□□□□ 0.13
NPAS2Q99743 PAM-206ENST00000438793 5432 ntAPPRIS ALT1 TSL 1 (best) BASIC15.88■□□□□ 0.13
NPAS2Q99743 CES4A-207ENST00000540947 2284 ntAPPRIS P2 TSL 2 BASIC15.88■□□□□ 0.13
NPAS2Q99743 SYN1-202ENST00000340666 3172 ntAPPRIS ALT2 TSL 1 (best) BASIC15.88■□□□□ 0.13
NPAS2Q99743 CLDND1-222ENST00000510545 2124 ntAPPRIS P1 TSL 5 BASIC15.88■□□□□ 0.13
NPAS2Q99743 PKD1P5-201ENST00000532415 10291 ntBASIC15.88■□□□□ 0.13
NPAS2Q99743 SLC6A11-201ENST00000254488 4296 ntAPPRIS P1 TSL 1 (best) BASIC15.88■□□□□ 0.13
NPAS2Q99743 HAPLN3-201ENST00000359595 1980 ntAPPRIS P1 TSL 1 (best) BASIC15.88■□□□□ 0.13
NPAS2Q99743 SPERT-201ENST00000310521 1613 ntAPPRIS P3 TSL 1 (best) BASIC15.88■□□□□ 0.13
NPAS2Q99743 CPEB2-AS1-201ENST00000500394 1630 ntTSL 1 (best) BASIC15.88■□□□□ 0.13
NPAS2Q99743 FGFBP2-201ENST00000259989 1168 ntAPPRIS P1 TSL 1 (best) BASIC15.88■□□□□ 0.13
NPAS2Q99743 HELT-201ENST00000338875 1008 ntTSL 1 (best) BASIC15.88■□□□□ 0.13
NPAS2Q99743 PAXX-201ENST00000371620 812 ntAPPRIS P1 TSL 1 (best) BASIC15.88■□□□□ 0.13
NPAS2Q99743 HIST1H2BL-201ENST00000377401 488 ntAPPRIS P1 BASIC15.88■□□□□ 0.13
NPAS2Q99743 RFXANK-202ENST00000392324 1059 ntTSL 1 (best) BASIC15.88■□□□□ 0.13
NPAS2Q99743 YDJC-202ENST00000398873 1066 ntTSL 1 (best) BASIC15.88■□□□□ 0.13
NPAS2Q99743 ARPC4-203ENST00000433034 926 ntTSL 3 BASIC15.88■□□□□ 0.13
NPAS2Q99743 BAALC-AS2-201ENST00000436771 496 ntTSL 1 (best) BASIC15.88■□□□□ 0.13
NPAS2Q99743 LINC01705-201ENST00000438158 562 ntTSL 2 BASIC15.88■□□□□ 0.13
NPAS2Q99743 FTCD-AS1-201ENST00000446649 500 ntTSL 2 BASIC15.88■□□□□ 0.13
NPAS2Q99743 AC126696.3-201ENST00000563993 575 ntTSL 4 BASIC15.88■□□□□ 0.13
NPAS2Q99743 COX5A-206ENST00000568783 571 ntTSL 3 BASIC15.88■□□□□ 0.13
NPAS2Q99743 AC002347.1-201ENST00000569543 541 ntBASIC15.88■□□□□ 0.13
NPAS2Q99743 KLK6-204ENST00000594641 842 ntAPPRIS P1 TSL 1 (best) BASIC15.88■□□□□ 0.13
NPAS2Q99743 AC008403.2-204ENST00000600650 1006 ntTSL 3 BASIC15.88■□□□□ 0.13
NPAS2Q99743 GGTLC5P-201ENST00000617623 998 ntBASIC15.88■□□□□ 0.13
NPAS2Q99743 AL513190.1-201ENST00000621254 727 ntBASIC15.88■□□□□ 0.13
NPAS2Q99743 AC010507.1-201ENST00000633895 436 ntBASIC15.88■□□□□ 0.13
NPAS2Q99743 ISLR-201ENST00000249842 2371 ntAPPRIS P1 TSL 1 (best) BASIC15.88■□□□□ 0.13
NPAS2Q99743 SLC39A1-203ENST00000368621 2398 ntAPPRIS P1 TSL 2 BASIC15.88■□□□□ 0.13
NPAS2Q99743 MROH6-201ENST00000398882 3469 ntAPPRIS P2 TSL 5 BASIC15.88■□□□□ 0.13
NPAS2Q99743 SLC35A3-221ENST00000640600 3341 ntTSL 5 BASIC15.88■□□□□ 0.13
NPAS2Q99743 NTRK3-203ENST00000357724 2980 ntTSL 5 BASIC15.88■□□□□ 0.13
NPAS2Q99743 PPA2-201ENST00000341695 1684 ntAPPRIS P1 TSL 1 (best) BASIC15.88■□□□□ 0.13
NPAS2Q99743 GOLGA2P3Y-201ENST00000416946 1653 ntBASIC15.88■□□□□ 0.13
NPAS2Q99743 GLUD2-201ENST00000328078 2493 ntAPPRIS P1 BASIC15.88■□□□□ 0.13
NPAS2Q99743 WDR45-239ENST00000634944 1745 ntAPPRIS P1 TSL 5 BASIC15.88■□□□□ 0.13
NPAS2Q99743 SLC29A1-206ENST00000371755 2112 ntAPPRIS P1 TSL 1 (best) BASIC15.88■□□□□ 0.13
NPAS2Q99743 PHTF1-201ENST00000357783 2747 ntTSL 1 (best) BASIC15.88■□□□□ 0.13
NPAS2Q99743 NUP88-207ENST00000573584 2916 ntAPPRIS P1 TSL 1 (best) BASIC15.88■□□□□ 0.13
NPAS2Q99743 FNDC8-201ENST00000158009 1388 ntAPPRIS P1 TSL 1 (best) BASIC15.87■□□□□ 0.13
NPAS2Q99743 R3HDM2-201ENST00000347140 4331 ntAPPRIS P2 TSL 1 (best) BASIC15.87■□□□□ 0.13
NPAS2Q99743 DPP6-203ENST00000404039 4798 ntTSL 1 (best) BASIC15.87■□□□□ 0.13
NPAS2Q99743 CPEB2-201ENST00000259997 5612 ntAPPRIS ALT2 TSL 5 BASIC15.87■□□□□ 0.13
NPAS2Q99743 SURF6-201ENST00000372022 4447 ntAPPRIS P1 TSL 1 (best) BASIC15.87■□□□□ 0.13
NPAS2Q99743 IQSEC3-203ENST00000538872 7094 ntAPPRIS ALT2 TSL 5 BASIC15.87■□□□□ 0.13
NPAS2Q99743 CRK-202ENST00000398970 3675 ntTSL 1 (best) BASIC15.87■□□□□ 0.13
NPAS2Q99743 PITPNC1-203ENST00000580974 6182 ntAPPRIS ALT2 TSL 1 (best) BASIC15.87■□□□□ 0.13
NPAS2Q99743 EPS8L2-218ENST00000530636 2469 ntAPPRIS P2 TSL 1 (best) BASIC15.87■□□□□ 0.13
NPAS2Q99743 DHRS1-201ENST00000288111 1480 ntAPPRIS P1 TSL 1 (best) BASIC15.87■□□□□ 0.13
NPAS2Q99743 TUBB6-211ENST00000591208 1492 ntTSL 5 BASIC15.87■□□□□ 0.13
NPAS2Q99743 AP001058.1-201ENST00000423967 463 ntTSL 2 BASIC15.87■□□□□ 0.13
NPAS2Q99743 AC131097.3-202ENST00000439270 331 ntTSL 5 BASIC15.87■□□□□ 0.13
NPAS2Q99743 PAWRP1-201ENST00000451083 565 ntBASIC15.87■□□□□ 0.13
NPAS2Q99743 MAL2-202ENST00000531508 892 ntTSL 3 BASIC15.87■□□□□ 0.13
NPAS2Q99743 TMEM258-204ENST00000537328 575 ntAPPRIS P1 TSL 1 (best) BASIC15.87■□□□□ 0.13
NPAS2Q99743 LINC00596-201ENST00000559615 937 ntTSL 5 BASIC15.87■□□□□ 0.13
NPAS2Q99743 CYB561-216ENST00000582297 897 ntTSL 3 BASIC15.87■□□□□ 0.13
NPAS2Q99743 AC005256.1-202ENST00000592934 415 ntTSL 2 BASIC15.87■□□□□ 0.13
NPAS2Q99743 SIGLEC29P-201ENST00000599873 1114 ntBASIC15.87■□□□□ 0.13
NPAS2Q99743 MAGIX-204ENST00000614074 778 ntTSL 1 (best) BASIC15.87■□□□□ 0.13
NPAS2Q99743 AL662799.1-201ENST00000630418 496 ntTSL 5 BASIC15.87■□□□□ 0.13
NPAS2Q99743 CHRFAM7A-203ENST00000401522 1913 ntTSL 1 (best) BASIC15.87■□□□□ 0.13
NPAS2Q99743 MARVELD1-201ENST00000285605 3221 ntAPPRIS P1 TSL 2 BASIC15.87■□□□□ 0.13
NPAS2Q99743 SOWAHA-201ENST00000378693 3211 ntAPPRIS P1 BASIC15.87■□□□□ 0.13
NPAS2Q99743 ARCN1-203ENST00000392859 1709 ntTSL 2 BASIC15.87■□□□□ 0.13
NPAS2Q99743 ACOX3-202ENST00000413009 2374 ntTSL 1 (best) BASIC15.87■□□□□ 0.13
NPAS2Q99743 GABRA5-202ENST00000355395 2183 ntAPPRIS P1 TSL 5 BASIC15.87■□□□□ 0.13
NPAS2Q99743 HLA-F-218ENST00000376861 1544 ntAPPRIS ALT2 BASIC15.87■□□□□ 0.13
NPAS2Q99743 ATG4B-205ENST00000404914 2878 ntAPPRIS P1 TSL 1 (best) BASIC15.87■□□□□ 0.13
NPAS2Q99743 AP000866.1-201ENST00000499143 2886 ntTSL 1 (best) BASIC15.87■□□□□ 0.13
NPAS2Q99743 TJP1-201ENST00000346128 7950 ntAPPRIS P3 TSL 1 (best) BASIC15.87■□□□□ 0.13
NPAS2Q99743 EIPR1-202ENST00000398659 1795 ntTSL 5 BASIC15.87■□□□□ 0.13
NPAS2Q99743 RBM4-204ENST00000408993 1763 ntAPPRIS P1 TSL 5 BASIC15.87■□□□□ 0.13
NPAS2Q99743 EPHX1-206ENST00000614058 1789 ntAPPRIS P1 TSL 1 (best) BASIC15.87■□□□□ 0.13
NPAS2Q99743 PARVB-204ENST00000406477 1569 ntTSL 1 (best) BASIC15.87■□□□□ 0.13
NPAS2Q99743 PPP1R37-201ENST00000221462 3163 ntAPPRIS P1 TSL 5 BASIC15.87■□□□□ 0.13
NPAS2Q99743 PCNX2-201ENST00000258229 7518 ntAPPRIS P2 TSL 5 BASIC15.87■□□□□ 0.13
NPAS2Q99743 FAM181A-201ENST00000267594 1816 ntTSL 2 BASIC15.87■□□□□ 0.13
NPAS2Q99743 SDR16C5-201ENST00000303749 1840 ntAPPRIS P1 TSL 1 (best) BASIC15.87■□□□□ 0.13
NPAS2Q99743 MAGEA2-201ENST00000595583 1830 ntAPPRIS P1 TSL 1 (best) BASIC15.87■□□□□ 0.13
NPAS2Q99743 TMEM177-201ENST00000272521 1394 ntAPPRIS P1 TSL 1 (best) BASIC15.87■□□□□ 0.13
NPAS2Q99743 MIR155HG-201ENST00000456917 1600 ntTSL 5 BASIC15.86■□□□□ 0.13
NPAS2Q99743 DNM1-201ENST00000341179 3254 ntAPPRIS ALT1 TSL 1 (best) BASIC15.86■□□□□ 0.13
NPAS2Q99743 CBX3P2-201ENST00000579647 1429 ntTSL 2 BASIC15.86■□□□□ 0.13
NPAS2Q99743 FBXO28-201ENST00000366862 5451 ntAPPRIS P1 TSL 1 (best) BASIC15.86■□□□□ 0.13
NPAS2Q99743 GPR161-202ENST00000367835 2400 ntAPPRIS P1 TSL 2 BASIC15.86■□□□□ 0.13
NPAS2Q99743 REPIN1-209ENST00000479668 3182 ntTSL 2 BASIC15.86■□□□□ 0.13
NPAS2Q99743 SLC3A2-208ENST00000536981 1486 ntTSL 2 BASIC15.86■□□□□ 0.13
NPAS2Q99743 ZNF334-202ENST00000457685 3487 ntTSL 2 BASIC15.86■□□□□ 0.13
NPAS2Q99743 PPP2R5D-208ENST00000485511 3044 ntAPPRIS P3 TSL 1 (best) BASIC15.86■□□□□ 0.13
NPAS2Q99743 MSMO1-202ENST00000393766 1789 ntTSL 2 BASIC15.86■□□□□ 0.13
NPAS2Q99743 SNHG11-205ENST00000421599 1046 ntTSL 3 BASIC15.86■□□□□ 0.13
Retrieved 100 of 98,524 protein–RNA pairs in 27.7 ms