Protein–RNA interactions for Protein: Q96RF0

SNX18, Sorting nexin-18, humanhuman

Predictions only

Length 628 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SNX18Q96RF0 DNAJC10-210ENST00000616986 5783 ntTSL 1 (best) BASIC14.8□□□□□ -0.04
SNX18Q96RF0 AL596087.1-201ENST00000400979 1969 ntBASIC14.8□□□□□ -0.04
SNX18Q96RF0 RAF1-205ENST00000442415 3085 ntTSL 5 BASIC14.8□□□□□ -0.04
SNX18Q96RF0 POLR2A-201ENST00000572844 2083 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
SNX18Q96RF0 CPEB2-203ENST00000382395 5524 ntAPPRIS ALT2 TSL 1 (best) BASIC14.8□□□□□ -0.04
SNX18Q96RF0 FBXL5-201ENST00000341285 3385 ntAPPRIS P3 TSL 1 (best) BASIC14.8□□□□□ -0.04
SNX18Q96RF0 POP4-201ENST00000221770 2321 ntTSL 1 (best) BASIC14.8□□□□□ -0.04
SNX18Q96RF0 IRAK1-203ENST00000369980 3666 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
SNX18Q96RF0 UBAC2-202ENST00000376440 2525 ntTSL 2 BASIC14.8□□□□□ -0.04
SNX18Q96RF0 NRN1L-201ENST00000339176 710 ntAPPRIS P2 TSL 1 (best) BASIC14.8□□□□□ -0.04
SNX18Q96RF0 ADIPOR1-202ENST00000367254 1116 ntTSL 1 (best) BASIC14.8□□□□□ -0.04
SNX18Q96RF0 HUS1B-201ENST00000380907 1025 ntAPPRIS P1 BASIC14.8□□□□□ -0.04
SNX18Q96RF0 CBX7-202ENST00000401405 784 ntTSL 1 (best) BASIC14.8□□□□□ -0.04
SNX18Q96RF0 AC064807.1-202ENST00000423716 936 ntTSL 2 BASIC14.8□□□□□ -0.04
SNX18Q96RF0 RNASET2-206ENST00000476238 887 ntAPPRIS P1 TSL 5 BASIC14.8□□□□□ -0.04
SNX18Q96RF0 AC055811.1-201ENST00000584203 1231 ntTSL 5 BASIC14.8□□□□□ -0.04
SNX18Q96RF0 PIN1-206ENST00000587625 878 ntTSL 2 BASIC14.8□□□□□ -0.04
SNX18Q96RF0 CAND2-206ENST00000626378 333 ntTSL 5 BASIC14.8□□□□□ -0.04
SNX18Q96RF0 PSMA6-216ENST00000627895 484 ntTSL 5 BASIC14.8□□□□□ -0.04
SNX18Q96RF0 CDH1-202ENST00000422392 2567 ntTSL 1 (best) BASIC14.8□□□□□ -0.04
SNX18Q96RF0 UHRF1-204ENST00000616255 2661 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
SNX18Q96RF0 VAT1-201ENST00000355653 2734 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
SNX18Q96RF0 PRX-201ENST00000291825 5502 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
SNX18Q96RF0 AC104109.2-201ENST00000602919 1418 ntBASIC14.8□□□□□ -0.04
SNX18Q96RF0 LZTS1-202ENST00000381569 5706 ntAPPRIS P1 TSL 5 BASIC14.8□□□□□ -0.04
SNX18Q96RF0 SURF6-201ENST00000372022 4447 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
SNX18Q96RF0 AC062028.1-203ENST00000447433 1472 ntTSL 1 (best) BASIC14.8□□□□□ -0.04
SNX18Q96RF0 SDCBP2-202ENST00000360779 1519 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
SNX18Q96RF0 ACTR3-208ENST00000535589 1530 ntTSL 2 BASIC14.8□□□□□ -0.04
SNX18Q96RF0 ATP6V1C2-204ENST00000635370 1578 ntTSL 5 BASIC14.8□□□□□ -0.04
SNX18Q96RF0 ARHGAP45-212ENST00000590577 3218 ntTSL 2 BASIC14.8□□□□□ -0.04
SNX18Q96RF0 SPERT-201ENST00000310521 1613 ntAPPRIS P3 TSL 1 (best) BASIC14.8□□□□□ -0.04
SNX18Q96RF0 TMPRSS2-206ENST00000458356 1701 ntAPPRIS P1 TSL 2 BASIC14.8□□□□□ -0.04
SNX18Q96RF0 TXNDC2-201ENST00000306084 1873 ntAPPRIS ALT2 TSL 1 (best) BASIC14.8□□□□□ -0.04
SNX18Q96RF0 DUS2-202ENST00000432752 1864 ntTSL 2 BASIC14.8□□□□□ -0.04
SNX18Q96RF0 PHLDB1-202ENST00000361417 5753 ntAPPRIS P3 TSL 1 (best) BASIC14.8□□□□□ -0.04
SNX18Q96RF0 SLFNL1-201ENST00000302946 1951 ntAPPRIS P3 TSL 1 (best) BASIC14.8□□□□□ -0.04
SNX18Q96RF0 SNAI2-201ENST00000020945 2010 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
SNX18Q96RF0 SCART1-206ENST00000640237 4351 ntAPPRIS P1 TSL 5 BASIC14.8□□□□□ -0.04
SNX18Q96RF0 MED20-201ENST00000265350 2438 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
SNX18Q96RF0 KCTD15-201ENST00000284006 4918 ntTSL 1 (best) BASIC14.8□□□□□ -0.04
SNX18Q96RF0 COMP-201ENST00000222271 2461 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
SNX18Q96RF0 MLKL-202ENST00000308807 2523 ntAPPRIS P1 TSL 2 BASIC14.8□□□□□ -0.04
SNX18Q96RF0 TBC1D9B-201ENST00000355235 5119 ntAPPRIS P3 TSL 5 BASIC14.8□□□□□ -0.04
SNX18Q96RF0 VANGL2-201ENST00000368061 5340 ntAPPRIS P1 TSL 2 BASIC14.79□□□□□ -0.04
SNX18Q96RF0 CAMTA1-201ENST00000303635 8444 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
SNX18Q96RF0 PTPN13-204ENST00000436978 8573 ntAPPRIS P4 TSL 5 BASIC14.79□□□□□ -0.04
SNX18Q96RF0 PTPRS-205ENST00000588012 5993 ntAPPRIS P3 TSL 1 (best) BASIC14.79□□□□□ -0.04
SNX18Q96RF0 GGT1-201ENST00000248923 2326 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
SNX18Q96RF0 GINS2-201ENST00000253462 2673 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
SNX18Q96RF0 DMRTC2-201ENST00000269945 1792 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
SNX18Q96RF0 GRB2-201ENST00000316615 3181 ntTSL 5 BASIC14.79□□□□□ -0.04
SNX18Q96RF0 ZNF446-201ENST00000335841 1889 ntTSL 5 BASIC14.79□□□□□ -0.04
SNX18Q96RF0 YIF1B-203ENST00000339413 1225 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
SNX18Q96RF0 TRIM14-201ENST00000341469 4454 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
SNX18Q96RF0 MSANTD3-201ENST00000374885 786 ntTSL 2 BASIC14.79□□□□□ -0.04
SNX18Q96RF0 UIMC1-201ENST00000377227 2570 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
SNX18Q96RF0 SRPX-201ENST00000378533 1874 ntAPPRIS P3 TSL 1 (best) BASIC14.79□□□□□ -0.04
SNX18Q96RF0 SNX11-202ENST00000393405 2733 ntAPPRIS P1 TSL 2 BASIC14.79□□□□□ -0.04
SNX18Q96RF0 TTC29-202ENST00000398886 1729 ntAPPRIS ALT2 TSL 5 BASIC14.79□□□□□ -0.04
SNX18Q96RF0 LHCGR-203ENST00000403273 1921 ntTSL 5 BASIC14.79□□□□□ -0.04
SNX18Q96RF0 TSPY3-202ENST00000440483 414 ntTSL 5 BASIC14.79□□□□□ -0.04
SNX18Q96RF0 TLE6-202ENST00000452088 1883 ntAPPRIS P3 TSL 1 (best) BASIC14.79□□□□□ -0.04
SNX18Q96RF0 MAGI1-216ENST00000497477 3555 ntTSL 5 BASIC14.79□□□□□ -0.04
SNX18Q96RF0 MTRF1LP2-201ENST00000506027 1122 ntBASIC14.79□□□□□ -0.04
SNX18Q96RF0 PMS2P7-201ENST00000506558 1336 ntBASIC14.79□□□□□ -0.04
SNX18Q96RF0 AC116021.1-201ENST00000530049 653 ntTSL 3 BASIC14.79□□□□□ -0.04
SNX18Q96RF0 NR2C2AP-204ENST00000538165 891 ntTSL 2 BASIC14.79□□□□□ -0.04
SNX18Q96RF0 DYNLL1-204ENST00000548214 616 ntTSL 2 BASIC14.79□□□□□ -0.04
SNX18Q96RF0 L2HGDH-206ENST00000555610 804 ntTSL 5 BASIC14.79□□□□□ -0.04
SNX18Q96RF0 NEO1-206ENST00000558964 4441 ntAPPRIS ALT2 TSL 1 (best) BASIC14.79□□□□□ -0.04
SNX18Q96RF0 AC012569.1-201ENST00000591191 1524 ntBASIC14.79□□□□□ -0.04
SNX18Q96RF0 ZEB1-AS1-209ENST00000607455 559 ntTSL 4 BASIC14.79□□□□□ -0.04
SNX18Q96RF0 APBB1-221ENST00000609360 2642 ntAPPRIS ALT1 TSL 5 BASIC14.79□□□□□ -0.04
SNX18Q96RF0 AL121832.1-201ENST00000615180 677 ntTSL 3 BASIC14.79□□□□□ -0.04
SNX18Q96RF0 AC087645.4-201ENST00000638890 792 ntTSL 5 BASIC14.79□□□□□ -0.04
SNX18Q96RF0 AC096667.1-201ENST00000640078 3465 ntTSL 5 BASIC14.79□□□□□ -0.04
SNX18Q96RF0 WDR81-202ENST00000409644 6733 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
SNX18Q96RF0 DYSF-207ENST00000409762 6727 ntAPPRIS ALT2 TSL 1 (best) BASIC14.79□□□□□ -0.04
SNX18Q96RF0 DYSF-211ENST00000429174 6739 ntAPPRIS ALT2 TSL 1 (best) BASIC14.79□□□□□ -0.04
SNX18Q96RF0 TRAPPC11-202ENST00000357207 4435 ntTSL 1 (best) BASIC14.79□□□□□ -0.04
SNX18Q96RF0 AC021683.3-202ENST00000592572 4440 ntTSL 5 BASIC14.79□□□□□ -0.04
SNX18Q96RF0 ZNF252P-AS1-201ENST00000527067 3236 ntBASIC14.79□□□□□ -0.04
SNX18Q96RF0 GRAP-201ENST00000284154 2651 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
SNX18Q96RF0 CDH16-207ENST00000568632 2526 ntTSL 1 (best) BASIC14.79□□□□□ -0.04
SNX18Q96RF0 PCDH19-202ENST00000373034 9756 ntAPPRIS ALT2 TSL 1 (best) BASIC14.78□□□□□ -0.04
SNX18Q96RF0 TPD52L2-209ENST00000611972 2197 ntTSL 3 BASIC14.78□□□□□ -0.04
SNX18Q96RF0 MAP7-207ENST00000616617 4326 ntAPPRIS ALT2 TSL 5 BASIC14.78□□□□□ -0.04
SNX18Q96RF0 GALNT9-202ENST00000397325 1727 ntTSL 1 (best) BASIC14.78□□□□□ -0.04
SNX18Q96RF0 BX276092.9-202ENST00000636096 1722 ntAPPRIS P5 TSL 5 BASIC14.78□□□□□ -0.04
SNX18Q96RF0 BCAR1-207ENST00000538440 3192 ntAPPRIS ALT2 TSL 2 BASIC14.78□□□□□ -0.04
SNX18Q96RF0 NRIP1-203ENST00000400202 7671 ntAPPRIS P1 TSL 5 BASIC14.78□□□□□ -0.04
SNX18Q96RF0 MALSU1-202ENST00000466681 3044 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
SNX18Q96RF0 TSPAN12-202ENST00000415871 1495 ntAPPRIS P1 TSL 5 BASIC14.78□□□□□ -0.04
SNX18Q96RF0 TAOK3-201ENST00000392533 4384 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
SNX18Q96RF0 SETD1B-201ENST00000267197 5772 ntAPPRIS ALT2 TSL 5 BASIC14.78□□□□□ -0.04
SNX18Q96RF0 ZBED1-201ENST00000381218 2832 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
SNX18Q96RF0 URAHP-203ENST00000517889 1381 ntTSL 1 (best) BASIC14.78□□□□□ -0.04
SNX18Q96RF0 CTSG-201ENST00000216336 886 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
SNX18Q96RF0 ISCA2-201ENST00000298818 851 ntTSL 5 BASIC14.78□□□□□ -0.04
Retrieved 100 of 98,524 protein–RNA pairs in 53.7 ms