Protein–RNA interactions for Protein: Q96A23

CPNE4, Copine-4, humanhuman

Predicted RBP Predictions only

Length 557 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CPNE4Q96A23 OAZ2-207ENST00000560258 1744 ntTSL 5 BASIC14.53□□□□□ -0.08
CPNE4Q96A23 SMC4-204ENST00000462787 5033 ntTSL 2 BASIC14.53□□□□□ -0.08
CPNE4Q96A23 SHISA5-219ENST00000612611 1677 ntTSL 5 BASIC14.53□□□□□ -0.08
CPNE4Q96A23 DMAC2-210ENST00000592922 1622 ntTSL 2 BASIC14.53□□□□□ -0.08
CPNE4Q96A23 PCGF2-206ENST00000618941 1499 ntTSL 5 BASIC14.53□□□□□ -0.08
CPNE4Q96A23 RNLS-201ENST00000331772 1447 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
CPNE4Q96A23 TOM1L2-209ENST00000540946 1420 ntTSL 2 BASIC14.53□□□□□ -0.08
CPNE4Q96A23 WDR61-201ENST00000267973 1387 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
CPNE4Q96A23 AFTPH-202ENST00000238856 4040 ntAPPRIS P3 TSL 1 (best) BASIC14.53□□□□□ -0.08
CPNE4Q96A23 C8orf76-201ENST00000276704 1341 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
CPNE4Q96A23 PDCD2L-201ENST00000246535 1171 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
CPNE4Q96A23 C16orf92-201ENST00000300575 895 ntAPPRIS P2 TSL 1 (best) BASIC14.53□□□□□ -0.08
CPNE4Q96A23 FKBP2-201ENST00000309366 657 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
CPNE4Q96A23 HIST2H3D-201ENST00000331491 411 ntAPPRIS P1 BASIC14.53□□□□□ -0.08
CPNE4Q96A23 SNHG11-201ENST00000359074 1031 ntTSL 1 (best) BASIC14.53□□□□□ -0.08
CPNE4Q96A23 LRRC37A5P-201ENST00000374304 1103 ntTSL 1 (best) BASIC14.53□□□□□ -0.08
CPNE4Q96A23 HIST2H3PS2-201ENST00000392948 411 ntAPPRIS P1 BASIC14.53□□□□□ -0.08
CPNE4Q96A23 PSMB5-204ENST00000460922 729 ntTSL 2 BASIC14.53□□□□□ -0.08
CPNE4Q96A23 ST7-OT4-203ENST00000466018 894 ntTSL 5 BASIC14.53□□□□□ -0.08
CPNE4Q96A23 ZIC4-214ENST00000491672 925 ntTSL 4 BASIC14.53□□□□□ -0.08
CPNE4Q96A23 INS-205ENST00000512523 297 ntTSL 1 (best) BASIC14.53□□□□□ -0.08
CPNE4Q96A23 UBE2V2-201ENST00000517630 612 ntTSL 4 BASIC14.53□□□□□ -0.08
CPNE4Q96A23 AC091053.1-201ENST00000529883 744 ntTSL 3 BASIC14.53□□□□□ -0.08
CPNE4Q96A23 RFPL4AP1-201ENST00000530883 850 ntBASIC14.53□□□□□ -0.08
CPNE4Q96A23 PPP1R14B-203ENST00000542235 920 ntTSL 1 (best) BASIC14.53□□□□□ -0.08
CPNE4Q96A23 RPL28-205ENST00000558131 444 ntTSL 5 BASIC14.53□□□□□ -0.08
CPNE4Q96A23 AC020978.5-201ENST00000564147 533 ntTSL 4 BASIC14.53□□□□□ -0.08
CPNE4Q96A23 MIR4453-201ENST00000584019 89 ntBASIC14.53□□□□□ -0.08
CPNE4Q96A23 AC005306.1-201ENST00000587498 661 ntTSL 3 BASIC14.53□□□□□ -0.08
CPNE4Q96A23 ORC5-208ENST00000626700 344 ntTSL 3 BASIC14.53□□□□□ -0.08
CPNE4Q96A23 C12orf29-201ENST00000356891 2919 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
CPNE4Q96A23 PTPRN2-201ENST00000389413 4723 ntTSL 1 (best) BASIC14.53□□□□□ -0.08
CPNE4Q96A23 THOC5-202ENST00000397871 2560 ntAPPRIS P1 TSL 5 BASIC14.53□□□□□ -0.08
CPNE4Q96A23 P2RX5-TAX1BP3-201ENST00000550383 5905 ntAPPRIS P1 TSL 2 BASIC14.53□□□□□ -0.08
CPNE4Q96A23 ZBTB17-216ENST00000537142 2511 ntTSL 2 BASIC14.53□□□□□ -0.08
CPNE4Q96A23 UGCG-201ENST00000374279 4007 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
CPNE4Q96A23 SLC25A48-203ENST00000425402 2062 ntTSL 5 BASIC14.53□□□□□ -0.08
CPNE4Q96A23 CPSF6-203ENST00000456847 1915 ntTSL 5 BASIC14.53□□□□□ -0.08
CPNE4Q96A23 EIF2B3-210ENST00000620860 1923 ntTSL 1 (best) BASIC14.53□□□□□ -0.08
CPNE4Q96A23 CYP4F11-203ENST00000402119 3161 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
CPNE4Q96A23 LINC01660-203ENST00000618517 1859 ntTSL 2 BASIC14.52□□□□□ -0.08
CPNE4Q96A23 CALHM2-202ENST00000369788 1843 ntAPPRIS P1 TSL 2 BASIC14.52□□□□□ -0.08
CPNE4Q96A23 HELZ2-202ENST00000427522 7827 ntTSL 1 (best) BASIC14.52□□□□□ -0.08
CPNE4Q96A23 IRF3-217ENST00000597198 1741 ntAPPRIS P1 TSL 2 BASIC14.52□□□□□ -0.08
CPNE4Q96A23 SIK3-201ENST00000375300 6213 ntAPPRIS P3 TSL 2 BASIC14.52□□□□□ -0.08
CPNE4Q96A23 HNRNPF-204ENST00000443950 2755 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.08
CPNE4Q96A23 HCLS1-202ENST00000428394 1560 ntTSL 2 BASIC14.52□□□□□ -0.08
CPNE4Q96A23 GPAT3-208ENST00000611707 2633 ntAPPRIS P1 TSL 5 BASIC14.52□□□□□ -0.08
CPNE4Q96A23 ST3GAL2-201ENST00000342907 4450 ntAPPRIS P1 TSL 5 BASIC14.52□□□□□ -0.08
CPNE4Q96A23 FHL2-201ENST00000322142 1462 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.08
CPNE4Q96A23 PDLIM1-201ENST00000329399 1452 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.08
CPNE4Q96A23 ALDOA-226ENST00000569798 1499 ntTSL 2 BASIC14.52□□□□□ -0.08
CPNE4Q96A23 ARL5B-201ENST00000377275 7196 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.08
CPNE4Q96A23 WDR45-240ENST00000635003 1376 ntTSL 3 BASIC14.52□□□□□ -0.08
CPNE4Q96A23 C1QTNF1-202ENST00000339142 3100 ntAPPRIS P1 TSL 5 BASIC14.52□□□□□ -0.08
CPNE4Q96A23 KLC1-212ENST00000553286 3135 ntTSL 5 BASIC14.52□□□□□ -0.08
CPNE4Q96A23 SLC3A2-203ENST00000377890 2161 ntTSL 1 (best) BASIC14.52□□□□□ -0.08
CPNE4Q96A23 SRP19-201ENST00000282999 937 ntTSL 1 (best) BASIC14.52□□□□□ -0.09
CPNE4Q96A23 GPHB5-201ENST00000314140 393 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.09
CPNE4Q96A23 LY6G6C-201ENST00000375819 992 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.09
CPNE4Q96A23 TNNT3-204ENST00000381558 1258 ntAPPRIS ALT2 TSL 5 BASIC14.52□□□□□ -0.09
CPNE4Q96A23 BAD-202ENST00000394531 631 ntTSL 3 BASIC14.52□□□□□ -0.09
CPNE4Q96A23 AC107890.1-201ENST00000422478 521 ntBASIC14.52□□□□□ -0.09
CPNE4Q96A23 AC026202.2-201ENST00000439325 672 ntTSL 2 BASIC14.52□□□□□ -0.09
CPNE4Q96A23 AC099552.3-201ENST00000454149 367 ntTSL 3 BASIC14.52□□□□□ -0.09
CPNE4Q96A23 BEST1-205ENST00000526988 1263 ntTSL 2 BASIC14.52□□□□□ -0.09
CPNE4Q96A23 AP002748.3-201ENST00000527092 828 ntTSL 3 BASIC14.52□□□□□ -0.09
CPNE4Q96A23 TATDN3-212ENST00000530441 492 ntTSL 3 BASIC14.52□□□□□ -0.09
CPNE4Q96A23 PXN-AS1-201ENST00000535200 1170 ntTSL 2 BASIC14.52□□□□□ -0.09
CPNE4Q96A23 BAD-207ENST00000544785 525 ntTSL 3 BASIC14.52□□□□□ -0.09
CPNE4Q96A23 AC140878.1-201ENST00000565277 250 ntBASIC14.52□□□□□ -0.09
CPNE4Q96A23 AC051619.7-201ENST00000568314 623 ntBASIC14.52□□□□□ -0.09
CPNE4Q96A23 NAA38-207ENST00000576861 556 ntTSL 3 BASIC14.52□□□□□ -0.09
CPNE4Q96A23 CBR3-AS1-216ENST00000624883 564 ntTSL 3 BASIC14.52□□□□□ -0.09
CPNE4Q96A23 FOXA1-201ENST00000250448 2862 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.09
CPNE4Q96A23 SIPA1-201ENST00000394224 3628 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.09
CPNE4Q96A23 SH3BP2-207ENST00000503393 9158 ntTSL 1 (best) BASIC14.52□□□□□ -0.09
CPNE4Q96A23 LRRFIP1-201ENST00000244815 4370 ntAPPRIS P3 TSL 1 (best) BASIC14.52□□□□□ -0.09
CPNE4Q96A23 PITPNM1-201ENST00000356404 4225 ntAPPRIS P3 TSL 1 (best) BASIC14.52□□□□□ -0.09
CPNE4Q96A23 OR4D1-202ENST00000641449 4925 ntAPPRIS P1 BASIC14.52□□□□□ -0.09
CPNE4Q96A23 SYNC-202ENST00000409190 3398 ntAPPRIS P3 TSL 2 BASIC14.52□□□□□ -0.09
CPNE4Q96A23 BX088651.4-201ENST00000435586 2579 ntTSL 2 BASIC14.52□□□□□ -0.09
CPNE4Q96A23 CACNB3-203ENST00000540990 1814 ntTSL 2 BASIC14.52□□□□□ -0.09
CPNE4Q96A23 AC105202.1-204ENST00000502167 1781 ntTSL 1 (best) BASIC14.52□□□□□ -0.09
CPNE4Q96A23 ALPPL2-201ENST00000295453 2493 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.09
CPNE4Q96A23 FAM227A-201ENST00000355830 2417 ntAPPRIS P5 TSL 5 BASIC14.52□□□□□ -0.09
CPNE4Q96A23 TLE2-202ENST00000426948 2406 ntTSL 5 BASIC14.52□□□□□ -0.09
CPNE4Q96A23 CXCL6-201ENST00000226317 1718 ntAPPRIS P2 TSL 1 (best) BASIC14.52□□□□□ -0.09
CPNE4Q96A23 BX276092.9-202ENST00000636096 1722 ntAPPRIS P5 TSL 5 BASIC14.52□□□□□ -0.09
CPNE4Q96A23 PDE4DIP-201ENST00000313431 5676 ntTSL 1 (best) BASIC14.52□□□□□ -0.09
CPNE4Q96A23 TMEM147-AS1-203ENST00000589137 1627 ntTSL 1 (best) BASIC14.52□□□□□ -0.09
CPNE4Q96A23 CPNE6-201ENST00000397016 2235 ntAPPRIS P1 TSL 2 BASIC14.51□□□□□ -0.09
CPNE4Q96A23 CPNE6-203ENST00000537691 2233 ntTSL 2 BASIC14.51□□□□□ -0.09
CPNE4Q96A23 PRKAG1-217ENST00000552212 1497 ntTSL 2 BASIC14.51□□□□□ -0.09
CPNE4Q96A23 CAMKV-217ENST00000620470 1485 ntTSL 1 (best) BASIC14.51□□□□□ -0.09
CPNE4Q96A23 HSFX1-201ENST00000370416 1963 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
CPNE4Q96A23 SERAC1-201ENST00000367101 1907 ntTSL 5 BASIC14.51□□□□□ -0.09
CPNE4Q96A23 IRF9-203ENST00000557894 1391 ntTSL 5 BASIC14.51□□□□□ -0.09
CPNE4Q96A23 SPINT1-202ENST00000562057 2456 ntAPPRIS ALT2 TSL 1 (best) BASIC14.51□□□□□ -0.09
CPNE4Q96A23 NCOA1-205ENST00000406961 7289 ntAPPRIS P4 TSL 5 BASIC14.51□□□□□ -0.09
Retrieved 100 of 98,524 protein–RNA pairs in 47.7 ms