Protein–RNA interactions for Protein: Q8NFY4

SEMA6D, Semaphorin-6D, humanhuman

Predictions only

Length 1,073 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SEMA6DQ8NFY4 DDX1-201ENST00000233084 2739 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
SEMA6DQ8NFY4 AL603832.2-201ENST00000566195 2125 ntBASIC14.21□□□□□ -0.13
SEMA6DQ8NFY4 NKX3-1-201ENST00000380871 3271 ntAPPRIS P3 TSL 1 (best) BASIC14.21□□□□□ -0.13
SEMA6DQ8NFY4 GAL3ST1-203ENST00000402321 1908 ntAPPRIS P1 TSL 2 BASIC14.21□□□□□ -0.13
SEMA6DQ8NFY4 DKC1-213ENST00000620277 3079 ntAPPRIS ALT2 TSL 1 (best) BASIC14.21□□□□□ -0.13
SEMA6DQ8NFY4 SIRT6-201ENST00000305232 1506 ntTSL 1 (best) BASIC14.21□□□□□ -0.13
SEMA6DQ8NFY4 SIN3B-202ENST00000379803 5129 ntAPPRIS P3 TSL 1 (best) BASIC14.21□□□□□ -0.13
SEMA6DQ8NFY4 FAM131A-207ENST00000450976 1335 ntTSL 3 BASIC14.21□□□□□ -0.13
SEMA6DQ8NFY4 SALL3-201ENST00000536229 3997 ntTSL 3 BASIC14.21□□□□□ -0.13
SEMA6DQ8NFY4 TIMM44-201ENST00000270538 2075 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
SEMA6DQ8NFY4 RTN3-205ENST00000356000 2645 ntTSL 2 BASIC14.21□□□□□ -0.13
SEMA6DQ8NFY4 NPM2-203ENST00000397940 1874 ntAPPRIS P2 TSL 2 BASIC14.21□□□□□ -0.13
SEMA6DQ8NFY4 MEIS3-210ENST00000561096 1883 ntAPPRIS ALT2 TSL 2 BASIC14.21□□□□□ -0.13
SEMA6DQ8NFY4 AJ239322.1-201ENST00000419362 2209 ntTSL 2 BASIC14.21□□□□□ -0.13
SEMA6DQ8NFY4 SMG1P3-206ENST00000522841 2774 ntTSL 2 BASIC14.21□□□□□ -0.13
SEMA6DQ8NFY4 AC012313.3-202ENST00000599109 3322 ntTSL 5 BASIC14.21□□□□□ -0.13
SEMA6DQ8NFY4 PRICKLE1-211ENST00000639566 3341 ntAPPRIS P1 TSL 5 BASIC14.21□□□□□ -0.13
SEMA6DQ8NFY4 IL3RA-202ENST00000381469 1476 ntTSL 5 BASIC14.21□□□□□ -0.13
SEMA6DQ8NFY4 HPSE-207ENST00000513463 1458 ntTSL 1 (best) BASIC14.21□□□□□ -0.13
SEMA6DQ8NFY4 PHF19-201ENST00000312189 836 ntTSL 1 (best) BASIC14.21□□□□□ -0.13
SEMA6DQ8NFY4 ICOSLG-201ENST00000344330 1009 ntAPPRIS ALT2 TSL 1 (best) BASIC14.21□□□□□ -0.13
SEMA6DQ8NFY4 ANAPC11-201ENST00000344877 918 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
SEMA6DQ8NFY4 IGLL3P-201ENST00000412472 434 ntBASIC14.21□□□□□ -0.13
SEMA6DQ8NFY4 AC254562.1-201ENST00000417586 456 ntBASIC14.21□□□□□ -0.13
SEMA6DQ8NFY4 HCG4B-203ENST00000450128 991 ntBASIC14.21□□□□□ -0.13
SEMA6DQ8NFY4 PMF1-BGLAP-203ENST00000490491 1007 ntAPPRIS P1 TSL 2 BASIC14.21□□□□□ -0.13
SEMA6DQ8NFY4 CFL1-202ENST00000524553 860 ntTSL 2 BASIC14.21□□□□□ -0.13
SEMA6DQ8NFY4 IL32-212ENST00000526464 1198 ntAPPRIS P4 TSL 2 BASIC14.21□□□□□ -0.13
SEMA6DQ8NFY4 IL32-217ENST00000530538 674 ntAPPRIS P4 TSL 3 BASIC14.21□□□□□ -0.13
SEMA6DQ8NFY4 AC096734.2-201ENST00000562054 433 ntBASIC14.21□□□□□ -0.13
SEMA6DQ8NFY4 SNHG9-202ENST00000564014 471 ntBASIC14.21□□□□□ -0.13
SEMA6DQ8NFY4 NUTF2-206ENST00000569436 1119 ntAPPRIS P1 TSL 2 BASIC14.21□□□□□ -0.13
SEMA6DQ8NFY4 ANAPC11-213ENST00000577747 672 ntAPPRIS P1 TSL 5 BASIC14.21□□□□□ -0.13
SEMA6DQ8NFY4 CDC42EP4-206ENST00000581014 737 ntTSL 5 BASIC14.21□□□□□ -0.13
SEMA6DQ8NFY4 MIR4469-201ENST00000583919 79 ntBASIC14.21□□□□□ -0.13
SEMA6DQ8NFY4 MBD4-206ENST00000507208 2194 ntAPPRIS ALT2 TSL 2 BASIC14.21□□□□□ -0.13
SEMA6DQ8NFY4 C1QTNF1-208ENST00000580474 1600 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
SEMA6DQ8NFY4 CCDC110-201ENST00000307588 2898 ntAPPRIS P3 TSL 1 (best) BASIC14.21□□□□□ -0.13
SEMA6DQ8NFY4 CCDC59-201ENST00000256151 1983 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
SEMA6DQ8NFY4 RUSC1-203ENST00000368349 1968 ntAPPRIS P3 TSL 1 (best) BASIC14.21□□□□□ -0.13
SEMA6DQ8NFY4 TMEM143-202ENST00000377431 1960 ntTSL 1 (best) BASIC14.21□□□□□ -0.13
SEMA6DQ8NFY4 LGR6-205ENST00000439764 2487 ntTSL 1 (best) BASIC14.21□□□□□ -0.13
SEMA6DQ8NFY4 VWA2-203ENST00000603594 2600 ntTSL 2 BASIC14.21□□□□□ -0.14
SEMA6DQ8NFY4 ATP2A3-205ENST00000397041 4675 ntAPPRIS P4 TSL 1 (best) BASIC14.21□□□□□ -0.14
SEMA6DQ8NFY4 AKAP12-201ENST00000253332 6597 ntAPPRIS P4 TSL 1 (best) BASIC14.21□□□□□ -0.14
SEMA6DQ8NFY4 PSD4-201ENST00000245796 5188 ntAPPRIS P2 TSL 1 (best) BASIC14.21□□□□□ -0.14
SEMA6DQ8NFY4 FBXW9-201ENST00000393261 1738 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.14
SEMA6DQ8NFY4 LRRC20-206ENST00000395011 2903 ntTSL 4 BASIC14.21□□□□□ -0.14
SEMA6DQ8NFY4 DIABLO-208ENST00000464942 2569 ntTSL 1 (best) BASIC14.21□□□□□ -0.14
SEMA6DQ8NFY4 MANSC1-201ENST00000396349 2220 ntTSL 2 BASIC14.21□□□□□ -0.14
SEMA6DQ8NFY4 C16orf89-201ENST00000315997 1872 ntAPPRIS P3 TSL 1 (best) BASIC14.21□□□□□ -0.14
SEMA6DQ8NFY4 MLLT6-210ENST00000620609 2714 ntAPPRIS ALT2 TSL 1 (best) BASIC14.21□□□□□ -0.14
SEMA6DQ8NFY4 DAGLA-201ENST00000257215 5757 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
SEMA6DQ8NFY4 AC067930.6-201ENST00000623257 4947 ntBASIC14.2□□□□□ -0.14
SEMA6DQ8NFY4 PNCK-202ENST00000370142 1525 ntTSL 5 BASIC14.2□□□□□ -0.14
SEMA6DQ8NFY4 AL592424.1-201ENST00000563624 1536 ntBASIC14.2□□□□□ -0.14
SEMA6DQ8NFY4 WDR45-234ENST00000634838 1545 ntTSL 5 BASIC14.2□□□□□ -0.14
SEMA6DQ8NFY4 IRF5-215ENST00000619830 1652 ntTSL 2 BASIC14.2□□□□□ -0.14
SEMA6DQ8NFY4 POM121C-206ENST00000607367 3690 ntAPPRIS ALT2 TSL 5 BASIC14.2□□□□□ -0.14
SEMA6DQ8NFY4 MYOD1-201ENST00000250003 1801 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
SEMA6DQ8NFY4 BID-201ENST00000317361 2495 ntTSL 1 (best) BASIC14.2□□□□□ -0.14
SEMA6DQ8NFY4 MBD1-210ENST00000457839 2473 ntAPPRIS ALT2 TSL 2 BASIC14.2□□□□□ -0.14
SEMA6DQ8NFY4 HSFX1-201ENST00000370416 1963 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
SEMA6DQ8NFY4 RUSC1-205ENST00000368354 3114 ntTSL 2 BASIC14.2□□□□□ -0.14
SEMA6DQ8NFY4 ELMSAN1-202ENST00000394071 7721 ntAPPRIS P2 TSL 1 (best) BASIC14.2□□□□□ -0.14
SEMA6DQ8NFY4 TTC13-201ENST00000366661 3253 ntAPPRIS P3 TSL 1 (best) BASIC14.2□□□□□ -0.14
SEMA6DQ8NFY4 RUNDC3B-202ENST00000338056 4099 ntTSL 2 BASIC14.2□□□□□ -0.14
SEMA6DQ8NFY4 AADAT-201ENST00000337664 2261 ntAPPRIS P3 TSL 1 (best) BASIC14.2□□□□□ -0.14
SEMA6DQ8NFY4 SIN3B-201ENST00000248054 5037 ntAPPRIS ALT2 TSL 1 (best) BASIC14.2□□□□□ -0.14
SEMA6DQ8NFY4 FAM160B1-202ENST00000369248 5810 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
SEMA6DQ8NFY4 MGME1-201ENST00000377704 1781 ntTSL 3 BASIC14.2□□□□□ -0.14
SEMA6DQ8NFY4 PBX1-215ENST00000559240 2866 ntTSL 5 BASIC14.2□□□□□ -0.14
SEMA6DQ8NFY4 SRCIN1-215ENST00000621492 4644 ntAPPRIS ALT2 TSL 5 BASIC14.2□□□□□ -0.14
SEMA6DQ8NFY4 ZNF746-201ENST00000340622 3806 ntAPPRIS P3 TSL 1 (best) BASIC14.2□□□□□ -0.14
SEMA6DQ8NFY4 VMO1-203ENST00000416307 712 ntTSL 2 BASIC14.2□□□□□ -0.14
SEMA6DQ8NFY4 AL049612.1-201ENST00000427017 694 ntTSL 5 BASIC14.2□□□□□ -0.14
SEMA6DQ8NFY4 PON3-203ENST00000427422 894 ntTSL 3 BASIC14.2□□□□□ -0.14
SEMA6DQ8NFY4 IQCF3-204ENST00000446775 1241 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
SEMA6DQ8NFY4 KRT18P2-201ENST00000447938 1258 ntBASIC14.2□□□□□ -0.14
SEMA6DQ8NFY4 TM4SF19-204ENST00000454715 1061 ntTSL 1 (best) BASIC14.2□□□□□ -0.14
SEMA6DQ8NFY4 DDIT4-AS1-201ENST00000491934 847 ntTSL 5 BASIC14.2□□□□□ -0.14
SEMA6DQ8NFY4 IGLL5-201ENST00000526893 1050 ntAPPRIS P2 TSL 1 (best) BASIC14.2□□□□□ -0.14
SEMA6DQ8NFY4 IGLL5-202ENST00000531372 882 ntTSL 1 (best) BASIC14.2□□□□□ -0.14
SEMA6DQ8NFY4 AC092384.3-201ENST00000561980 531 ntTSL 4 BASIC14.2□□□□□ -0.14
SEMA6DQ8NFY4 TNFRSF13B-203ENST00000579315 600 ntAPPRIS ALT2 TSL 3 BASIC14.2□□□□□ -0.14
SEMA6DQ8NFY4 AC004597.1-201ENST00000595525 561 ntTSL 4 BASIC14.2□□□□□ -0.14
SEMA6DQ8NFY4 AC244517.5-205ENST00000623615 575 ntTSL 4 BASIC14.2□□□□□ -0.14
SEMA6DQ8NFY4 AC007064.4-201ENST00000637740 555 ntBASIC14.2□□□□□ -0.14
SEMA6DQ8NFY4 NPNT-201ENST00000305572 3003 ntTSL 1 (best) BASIC14.2□□□□□ -0.14
SEMA6DQ8NFY4 ATP6V1E1-201ENST00000253413 1402 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
SEMA6DQ8NFY4 LITAF-201ENST00000339430 2356 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
SEMA6DQ8NFY4 HMBS-209ENST00000537841 1559 ntTSL 5 BASIC14.2□□□□□ -0.14
SEMA6DQ8NFY4 MCF2L-232ENST00000535094 3752 ntAPPRIS ALT2 TSL 2 BASIC14.2□□□□□ -0.14
SEMA6DQ8NFY4 MYH14-204ENST00000440075 4247 ntTSL 1 (best) BASIC14.2□□□□□ -0.14
SEMA6DQ8NFY4 MYCBPAP-203ENST00000436259 3102 ntAPPRIS ALT2 TSL 5 BASIC14.2□□□□□ -0.14
SEMA6DQ8NFY4 GRAMD2B-217ENST00000515200 3109 ntTSL 5 BASIC14.2□□□□□ -0.14
SEMA6DQ8NFY4 CCT2-202ENST00000543146 2189 ntTSL 2 BASIC14.2□□□□□ -0.14
SEMA6DQ8NFY4 KLHL36-204ENST00000564996 2173 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
SEMA6DQ8NFY4 TPD52L2-204ENST00000351424 2302 ntAPPRIS P4 TSL 2 BASIC14.2□□□□□ -0.14
SEMA6DQ8NFY4 CLDN6-201ENST00000328796 1369 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
Retrieved 100 of 98,524 protein–RNA pairs in 25.9 ms