Protein–RNA interactions for Protein: Q3KNV8

PCGF3, Polycomb group RING finger protein 3, humanhuman

Predictions only

Length 242 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCGF3Q3KNV8 ACTL9-202ENST00000612068 1252 ntBASIC14.4□□□□□ -0.1
PCGF3Q3KNV8 MRFAP1-205ENST00000617365 2112 ntTSL 5 BASIC14.4□□□□□ -0.1
PCGF3Q3KNV8 HOTTIP_1.1-201ENST00000620415 57 ntBASIC14.4□□□□□ -0.1
PCGF3Q3KNV8 PGLYRP1-201ENST00000008938 720 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
PCGF3Q3KNV8 GPS1-228ENST00000624957 1825 ntAPPRIS ALT1 TSL 5 BASIC14.4□□□□□ -0.1
PCGF3Q3KNV8 ORAOV1-201ENST00000279147 2478 ntAPPRIS P2 TSL 1 (best) BASIC14.4□□□□□ -0.1
PCGF3Q3KNV8 CCHCR1-202ENST00000396263 2490 ntTSL 5 BASIC14.4□□□□□ -0.1
PCGF3Q3KNV8 GABARAPL1-205ENST00000539170 1700 ntTSL 3 BASIC14.4□□□□□ -0.1
PCGF3Q3KNV8 SLC43A1-204ENST00000528450 2358 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
PCGF3Q3KNV8 MYH11-211ENST00000576790 6272 ntTSL 1 (best) BASIC14.4□□□□□ -0.1
PCGF3Q3KNV8 GLMP-201ENST00000362007 1604 ntAPPRIS P3 TSL 1 (best) BASIC14.4□□□□□ -0.1
PCGF3Q3KNV8 TMEM263-201ENST00000280756 3362 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
PCGF3Q3KNV8 TVP23C-201ENST00000225576 1527 ntTSL 1 (best) BASIC14.4□□□□□ -0.1
PCGF3Q3KNV8 SLC39A1-201ENST00000310483 2427 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
PCGF3Q3KNV8 RFPL2-203ENST00000400237 2407 ntAPPRIS P3 TSL 2 BASIC14.4□□□□□ -0.1
PCGF3Q3KNV8 LSP1-217ENST00000612798 1881 ntAPPRIS ALT2 TSL 2 BASIC14.4□□□□□ -0.1
PCGF3Q3KNV8 REM2-202ENST00000536884 1331 ntTSL 2 BASIC14.4□□□□□ -0.1
PCGF3Q3KNV8 GOLGA7B-201ENST00000370602 6447 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.11
PCGF3Q3KNV8 AGPS-201ENST00000264167 7764 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
PCGF3Q3KNV8 GRID2IP-201ENST00000435185 3215 ntTSL 5 BASIC14.39□□□□□ -0.11
PCGF3Q3KNV8 KCNG3-202ENST00000394973 3656 ntAPPRIS ALT1 TSL 1 (best) BASIC14.39□□□□□ -0.11
PCGF3Q3KNV8 ASB7-202ENST00000343276 1694 ntTSL 1 (best) BASIC14.39□□□□□ -0.11
PCGF3Q3KNV8 ZNF57-201ENST00000306908 2003 ntAPPRIS P2 TSL 1 (best) BASIC14.39□□□□□ -0.11
PCGF3Q3KNV8 RGS19-202ENST00000395042 1593 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
PCGF3Q3KNV8 ZNF57-205ENST00000614108 2002 ntAPPRIS ALT2 TSL 5 BASIC14.39□□□□□ -0.11
PCGF3Q3KNV8 POMT1-205ENST00000404875 2821 ntTSL 2 BASIC14.39□□□□□ -0.11
PCGF3Q3KNV8 IBA57-201ENST00000366711 7817 ntAPPRIS P1 TSL 2 BASIC14.39□□□□□ -0.11
PCGF3Q3KNV8 CYP51A1P2-201ENST00000419457 1499 ntBASIC14.39□□□□□ -0.11
PCGF3Q3KNV8 KCNH3-201ENST00000257981 3867 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
PCGF3Q3KNV8 NFATC4-204ENST00000424781 5488 ntAPPRIS ALT2 TSL 1 (best) BASIC14.39□□□□□ -0.11
PCGF3Q3KNV8 TNN-201ENST00000239462 5008 ntAPPRIS P1 TSL 2 BASIC14.39□□□□□ -0.11
PCGF3Q3KNV8 SLC44A2-203ENST00000586078 3784 ntTSL 5 BASIC14.39□□□□□ -0.11
PCGF3Q3KNV8 DUS3L-202ENST00000320699 1355 ntAPPRIS ALT2 TSL 1 (best) BASIC14.39□□□□□ -0.11
PCGF3Q3KNV8 TOP3BP1-201ENST00000420768 1380 ntBASIC14.39□□□□□ -0.11
PCGF3Q3KNV8 STPG3-AS1-201ENST00000612170 1701 ntTSL 2 BASIC14.39□□□□□ -0.11
PCGF3Q3KNV8 NID1-201ENST00000264187 5864 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
PCGF3Q3KNV8 PER1-201ENST00000317276 4707 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
PCGF3Q3KNV8 RAP1GDS1-203ENST00000380158 2085 ntTSL 1 (best) BASIC14.39□□□□□ -0.11
PCGF3Q3KNV8 RASGEF1C-206ENST00000522500 2055 ntTSL 2 BASIC14.39□□□□□ -0.11
PCGF3Q3KNV8 BECN1-213ENST00000590099 2087 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
PCGF3Q3KNV8 TDRKH-202ENST00000368823 2751 ntAPPRIS ALT1 TSL 2 BASIC14.39□□□□□ -0.11
PCGF3Q3KNV8 ZNF451-201ENST00000357489 4998 ntAPPRIS P3 TSL 1 (best) BASIC14.39□□□□□ -0.11
PCGF3Q3KNV8 PRLH-201ENST00000165524 264 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
PCGF3Q3KNV8 SMN1-201ENST00000351205 900 ntAPPRIS P3 TSL 1 (best) BASIC14.39□□□□□ -0.11
PCGF3Q3KNV8 SMN2-201ENST00000380741 900 ntAPPRIS P4 TSL 1 (best) BASIC14.39□□□□□ -0.11
PCGF3Q3KNV8 SGO2-202ENST00000409203 1041 ntAPPRIS ALT2 TSL 1 (best) BASIC14.39□□□□□ -0.11
PCGF3Q3KNV8 GNB2-205ENST00000419828 1285 ntTSL 5 BASIC14.39□□□□□ -0.11
PCGF3Q3KNV8 ZNF295-AS1-202ENST00000429739 783 ntTSL 1 (best) BASIC14.39□□□□□ -0.11
PCGF3Q3KNV8 AC074386.1-202ENST00000463561 864 ntBASIC14.39□□□□□ -0.11
PCGF3Q3KNV8 SFTPC-204ENST00000520605 519 ntTSL 3 BASIC14.39□□□□□ -0.11
PCGF3Q3KNV8 SFTPC-210ENST00000524255 681 ntTSL 2 BASIC14.39□□□□□ -0.11
PCGF3Q3KNV8 AC107918.2-201ENST00000530817 355 ntBASIC14.39□□□□□ -0.11
PCGF3Q3KNV8 BLOC1S1-201ENST00000547076 837 ntTSL 2 BASIC14.39□□□□□ -0.11
PCGF3Q3KNV8 AC091167.2-201ENST00000579581 588 ntBASIC14.39□□□□□ -0.11
PCGF3Q3KNV8 AC010776.2-201ENST00000588946 1081 ntTSL 2 BASIC14.39□□□□□ -0.11
PCGF3Q3KNV8 MED16-214ENST00000617672 554 ntTSL 5 BASIC14.39□□□□□ -0.11
PCGF3Q3KNV8 SMN2-216ENST00000638794 846 ntAPPRIS ALT2 TSL 5 BASIC14.39□□□□□ -0.11
PCGF3Q3KNV8 SNAPC1-201ENST00000216294 2656 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
PCGF3Q3KNV8 AL161772.1-201ENST00000610494 4412 ntBASIC14.39□□□□□ -0.11
PCGF3Q3KNV8 CDCA5-201ENST00000275517 2587 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
PCGF3Q3KNV8 LATS1-202ENST00000392273 2567 ntTSL 1 (best) BASIC14.39□□□□□ -0.11
PCGF3Q3KNV8 PNMA6E-202ENST00000633844 2596 ntTSL 3 BASIC14.39□□□□□ -0.11
PCGF3Q3KNV8 PHGDH-202ENST00000369409 1882 ntTSL 1 (best) BASIC14.39□□□□□ -0.11
PCGF3Q3KNV8 SYT1-201ENST00000261205 4808 ntAPPRIS P3 TSL 1 (best) BASIC14.39□□□□□ -0.11
PCGF3Q3KNV8 SERTAD1-201ENST00000357949 2114 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
PCGF3Q3KNV8 LRP8-202ENST00000347547 2382 ntTSL 1 (best) BASIC14.39□□□□□ -0.11
PCGF3Q3KNV8 AC025580.3-201ENST00000617932 1424 ntBASIC14.39□□□□□ -0.11
PCGF3Q3KNV8 UBA5-213ENST00000494238 2997 ntTSL 1 (best) BASIC14.39□□□□□ -0.11
PCGF3Q3KNV8 ATG13-216ENST00000530500 2030 ntTSL 2 BASIC14.39□□□□□ -0.11
PCGF3Q3KNV8 CTDSP1-201ENST00000273062 2638 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
PCGF3Q3KNV8 IGHM-202ENST00000637539 1683 ntAPPRIS P5 BASIC14.39□□□□□ -0.11
PCGF3Q3KNV8 FEN1-201ENST00000305885 2296 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
PCGF3Q3KNV8 GAL3ST1-203ENST00000402321 1908 ntAPPRIS P1 TSL 2 BASIC14.39□□□□□ -0.11
PCGF3Q3KNV8 ERO1B-202ENST00000354619 4567 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
PCGF3Q3KNV8 SATB2-205ENST00000443023 6194 ntTSL 5 BASIC14.39□□□□□ -0.11
PCGF3Q3KNV8 CXorf40A-209ENST00000441248 2411 ntAPPRIS P3 TSL 1 (best) BASIC14.39□□□□□ -0.11
PCGF3Q3KNV8 SUPT20HL2-201ENST00000486479 2409 ntBASIC14.39□□□□□ -0.11
PCGF3Q3KNV8 KDM3A-201ENST00000312912 4886 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
PCGF3Q3KNV8 AC105760.2-201ENST00000418430 2341 ntTSL 2 BASIC14.38□□□□□ -0.11
PCGF3Q3KNV8 FOS-208ENST00000555686 1496 ntTSL 2 BASIC14.38□□□□□ -0.11
PCGF3Q3KNV8 AL353732.1-201ENST00000569618 1459 ntBASIC14.38□□□□□ -0.11
PCGF3Q3KNV8 TTC29-202ENST00000398886 1729 ntAPPRIS ALT2 TSL 5 BASIC14.38□□□□□ -0.11
PCGF3Q3KNV8 PPFIBP2-201ENST00000299492 3557 ntAPPRIS P3 TSL 1 (best) BASIC14.38□□□□□ -0.11
PCGF3Q3KNV8 PCBP4-201ENST00000322099 1964 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
PCGF3Q3KNV8 LRRC71-201ENST00000337428 1959 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
PCGF3Q3KNV8 MBD4-203ENST00000429544 2478 ntAPPRIS ALT2 TSL 1 (best) BASIC14.38□□□□□ -0.11
PCGF3Q3KNV8 IPO8-201ENST00000256079 5325 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
PCGF3Q3KNV8 COBL-203ENST00000395542 5339 ntTSL 1 (best) BASIC14.38□□□□□ -0.11
PCGF3Q3KNV8 SLC39A8-202ENST00000394833 3238 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
PCGF3Q3KNV8 LILRA6-201ENST00000245621 1395 ntAPPRIS ALT2 TSL 5 BASIC14.38□□□□□ -0.11
PCGF3Q3KNV8 EIF2B4-206ENST00000451130 1633 ntTSL 1 (best) BASIC14.38□□□□□ -0.11
PCGF3Q3KNV8 TATDN3-214ENST00000532324 1381 ntTSL 2 BASIC14.38□□□□□ -0.11
PCGF3Q3KNV8 ZNF19-208ENST00000565637 2612 ntTSL 2 BASIC14.38□□□□□ -0.11
PCGF3Q3KNV8 LINC00895-201ENST00000629028 1637 ntBASIC14.38□□□□□ -0.11
PCGF3Q3KNV8 AC099063.4-201ENST00000641099 1602 ntBASIC14.38□□□□□ -0.11
PCGF3Q3KNV8 CDH7-203ENST00000536984 3766 ntTSL 1 (best) BASIC14.38□□□□□ -0.11
PCGF3Q3KNV8 KCNC2-207ENST00000548513 3026 ntAPPRIS ALT2 TSL 1 (best) BASIC14.38□□□□□ -0.11
PCGF3Q3KNV8 LRRFIP2-205ENST00000421276 2522 ntTSL 2 BASIC14.38□□□□□ -0.11
PCGF3Q3KNV8 TMEM155-202ENST00000394394 1753 ntAPPRIS P2 TSL 3 BASIC14.38□□□□□ -0.11
PCGF3Q3KNV8 GPR153-201ENST00000377893 4082 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
Retrieved 100 of 98,524 protein–RNA pairs in 55.6 ms