Protein–RNA interactions for Protein: Q07654

TFF3, Trefoil factor 3, humanhuman

Predictions only

Length 80 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TFF3Q07654 SRGAP2B-207ENST00000641863 2367 ntAPPRIS P5 BASIC14.18□□□□□ -0.14
TFF3Q07654 RASGRP2-206ENST00000377494 2983 ntAPPRIS ALT1 TSL 2 BASIC14.18□□□□□ -0.14
TFF3Q07654 RAB22A-201ENST00000244040 8670 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
TFF3Q07654 ZNF773-201ENST00000282292 2206 ntAPPRIS P3 TSL 1 (best) BASIC14.18□□□□□ -0.14
TFF3Q07654 DRG1-201ENST00000331457 1746 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
TFF3Q07654 TRIM46-209ENST00000543729 1703 ntTSL 5 BASIC14.18□□□□□ -0.14
TFF3Q07654 CCDC28A-201ENST00000332797 1496 ntTSL 1 (best) BASIC14.18□□□□□ -0.14
TFF3Q07654 CCDC142-201ENST00000290418 2835 ntAPPRIS P2 TSL 2 BASIC14.18□□□□□ -0.14
TFF3Q07654 MAPK8IP1-202ENST00000395629 3180 ntTSL 5 BASIC14.18□□□□□ -0.14
TFF3Q07654 CDK19-202ENST00000368911 6246 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
TFF3Q07654 PRKACG-201ENST00000377276 1585 ntAPPRIS P1 BASIC14.17□□□□□ -0.14
TFF3Q07654 DIABLO-203ENST00000353548 1345 ntTSL 1 (best) BASIC14.17□□□□□ -0.14
TFF3Q07654 ARHGAP33-201ENST00000007510 2545 ntAPPRIS ALT2 TSL 5 BASIC14.17□□□□□ -0.14
TFF3Q07654 VSTM2A-204ENST00000407838 3112 ntAPPRIS P1 TSL 3 BASIC14.17□□□□□ -0.14
TFF3Q07654 GDE1-201ENST00000353258 2958 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
TFF3Q07654 MYC-202ENST00000377970 2351 ntAPPRIS ALT2 TSL 1 (best) BASIC14.17□□□□□ -0.14
TFF3Q07654 GSKIP-201ENST00000438650 2140 ntAPPRIS P1 TSL 2 BASIC14.17□□□□□ -0.14
TFF3Q07654 KLHL33-201ENST00000344581 1863 ntTSL 5 BASIC14.17□□□□□ -0.14
TFF3Q07654 ST3GAL6-214ENST00000483910 1886 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
TFF3Q07654 AL365277.1-202ENST00000331856 2241 ntTSL 2 BASIC14.17□□□□□ -0.14
TFF3Q07654 MTDH-201ENST00000336273 6177 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
TFF3Q07654 JPH2-202ENST00000372980 4787 ntAPPRIS P1 TSL 5 BASIC14.17□□□□□ -0.14
TFF3Q07654 LRRN4-201ENST00000378858 2692 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
TFF3Q07654 LRP8-207ENST00000465675 2670 ntTSL 2 BASIC14.17□□□□□ -0.14
TFF3Q07654 INPP5J-213ENST00000620191 2306 ntTSL 1 (best) BASIC14.17□□□□□ -0.14
TFF3Q07654 TM4SF19-201ENST00000273695 1022 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
TFF3Q07654 H1FOO-201ENST00000324382 1067 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
TFF3Q07654 EFNA4-201ENST00000359751 1096 ntAPPRIS ALT2 TSL 1 (best) BASIC14.17□□□□□ -0.14
TFF3Q07654 KAZN-201ENST00000361144 3838 ntTSL 1 (best) BASIC14.17□□□□□ -0.14
TFF3Q07654 TPSD1-202ENST00000397534 896 ntAPPRIS ALT2 TSL 5 BASIC14.17□□□□□ -0.14
TFF3Q07654 IQCF3-202ENST00000440739 505 ntAPPRIS P1 TSL 2 BASIC14.17□□□□□ -0.14
TFF3Q07654 AC091729.1-201ENST00000449721 869 ntTSL 3 BASIC14.17□□□□□ -0.14
TFF3Q07654 RHOA-206ENST00000454011 889 ntTSL 2 BASIC14.17□□□□□ -0.14
TFF3Q07654 AL139010.1-201ENST00000454878 894 ntBASIC14.17□□□□□ -0.14
TFF3Q07654 C9orf41-AS1-201ENST00000455609 719 ntTSL 1 (best) BASIC14.17□□□□□ -0.14
TFF3Q07654 AL161781.2-201ENST00000509911 739 ntTSL 2 BASIC14.17□□□□□ -0.14
TFF3Q07654 FADS2-205ENST00000517839 469 ntTSL 3 BASIC14.17□□□□□ -0.14
TFF3Q07654 AC006064.3-201ENST00000537921 477 ntTSL 4 BASIC14.17□□□□□ -0.14
TFF3Q07654 AC005342.2-201ENST00000544163 315 ntTSL 3 BASIC14.17□□□□□ -0.14
TFF3Q07654 RRP7BP-205ENST00000566851 833 ntBASIC14.17□□□□□ -0.14
TFF3Q07654 ZDHHC20-209ENST00000542645 5315 ntAPPRIS ALT2 TSL 2 BASIC14.17□□□□□ -0.14
TFF3Q07654 NAA50-201ENST00000240922 6135 ntAPPRIS P3 TSL 1 (best) BASIC14.17□□□□□ -0.14
TFF3Q07654 NID1-202ENST00000366595 5412 ntTSL 1 (best) BASIC14.17□□□□□ -0.14
TFF3Q07654 PEX10-201ENST00000288774 2871 ntTSL 1 (best) BASIC14.17□□□□□ -0.14
TFF3Q07654 EWSAT1-206ENST00000558922 1725 ntTSL 5 BASIC14.17□□□□□ -0.14
TFF3Q07654 AD000671.3-202ENST00000591091 1712 ntTSL 1 (best) BASIC14.17□□□□□ -0.14
TFF3Q07654 ABCF3-203ENST00000429586 2624 ntAPPRIS P2 TSL 1 (best) BASIC14.17□□□□□ -0.14
TFF3Q07654 PNO1-201ENST00000263657 2286 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
TFF3Q07654 ZDHHC4-203ENST00000396707 1461 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
TFF3Q07654 TBP-202ENST00000392092 1903 ntAPPRIS P3 TSL 1 (best) BASIC14.17□□□□□ -0.14
TFF3Q07654 LAT2-204ENST00000398475 2453 ntAPPRIS P2 TSL 1 (best) BASIC14.17□□□□□ -0.14
TFF3Q07654 RUNX2-201ENST00000359524 5390 ntTSL 1 (best) BASIC14.17□□□□□ -0.14
TFF3Q07654 FBXO4-201ENST00000281623 1682 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
TFF3Q07654 PACS1-209ENST00000529757 1688 ntAPPRIS ALT2 TSL 1 (best) BASIC14.17□□□□□ -0.14
TFF3Q07654 PCDHA6-202ENST00000527624 2231 ntTSL 1 (best) BASIC14.17□□□□□ -0.14
TFF3Q07654 GSKIP-205ENST00000555181 2218 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
TFF3Q07654 TRMT44-201ENST00000389737 2799 ntAPPRIS P2 TSL 5 BASIC14.17□□□□□ -0.14
TFF3Q07654 PCDH8P1-201ENST00000428983 2773 ntBASIC14.17□□□□□ -0.14
TFF3Q07654 SLC45A1-202ENST00000471889 2784 ntTSL 5 BASIC14.17□□□□□ -0.14
TFF3Q07654 FOXA1-201ENST00000250448 2862 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
TFF3Q07654 VPS37C-201ENST00000301765 2865 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
TFF3Q07654 AL031731.1-201ENST00000642131 2094 ntBASIC14.16□□□□□ -0.14
TFF3Q07654 PCDHA14-201ENST00000506751 2298 ntBASIC14.16□□□□□ -0.14
TFF3Q07654 THEM4-201ENST00000368814 2377 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
TFF3Q07654 SLC38A6-202ENST00000354886 1730 ntTSL 1 (best) BASIC14.16□□□□□ -0.14
TFF3Q07654 TONSL-203ENST00000613741 1713 ntTSL 5 BASIC14.16□□□□□ -0.14
TFF3Q07654 VAV3-210ENST00000527011 4510 ntTSL 1 (best) BASIC14.16□□□□□ -0.14
TFF3Q07654 CENPN-202ENST00000305850 2481 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
TFF3Q07654 C4orf50-202ENST00000531445 6860 ntAPPRIS P5 TSL 5 BASIC14.16□□□□□ -0.14
TFF3Q07654 AL645728.1-201ENST00000366221 2101 ntBASIC14.16□□□□□ -0.14
TFF3Q07654 TMEM26-AS1-201ENST00000389640 863 ntTSL 5 BASIC14.16□□□□□ -0.14
TFF3Q07654 FAM221A-203ENST00000409653 761 ntTSL 5 BASIC14.16□□□□□ -0.14
TFF3Q07654 FAM221A-204ENST00000409994 1136 ntTSL 1 (best) BASIC14.16□□□□□ -0.14
TFF3Q07654 RHCE-206ENST00000413854 1198 ntTSL 1 (best) BASIC14.16□□□□□ -0.14
TFF3Q07654 AGGF1P2-201ENST00000426656 2106 ntBASIC14.16□□□□□ -0.14
TFF3Q07654 AC017116.1-201ENST00000445938 708 ntTSL 3 BASIC14.16□□□□□ -0.14
TFF3Q07654 AC103957.2-201ENST00000521218 510 ntTSL 2 BASIC14.16□□□□□ -0.14
TFF3Q07654 AP002490.2-201ENST00000524791 560 ntBASIC14.16□□□□□ -0.14
TFF3Q07654 TMEM218-210ENST00000529609 734 ntTSL 3 BASIC14.16□□□□□ -0.14
TFF3Q07654 TMEM261P1-201ENST00000604899 340 ntBASIC14.16□□□□□ -0.14
TFF3Q07654 WFDC1-204ENST00000613603 549 ntBASIC14.16□□□□□ -0.14
TFF3Q07654 ANKRD24-202ENST00000318934 3906 ntAPPRIS P2 TSL 5 BASIC14.16□□□□□ -0.14
TFF3Q07654 TMEM127-202ENST00000432959 3099 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
TFF3Q07654 ASIC3-203ENST00000357922 2232 ntTSL 1 (best) BASIC14.16□□□□□ -0.14
TFF3Q07654 AC105020.1-201ENST00000435356 2205 ntBASIC14.16□□□□□ -0.14
TFF3Q07654 NFIX-209ENST00000587760 1487 ntTSL 1 (best) BASIC14.16□□□□□ -0.14
TFF3Q07654 CCT6A-202ENST00000335503 2529 ntTSL 5 BASIC14.16□□□□□ -0.14
TFF3Q07654 FLVCR1-AS1-201ENST00000356684 2525 ntTSL 2 BASIC14.16□□□□□ -0.14
TFF3Q07654 ADRA1A-204ENST00000380573 2548 ntAPPRIS P1 TSL 2 BASIC14.16□□□□□ -0.14
TFF3Q07654 POLR3E-203ENST00000418581 2529 ntTSL 2 BASIC14.16□□□□□ -0.14
TFF3Q07654 HS6ST2-204ENST00000521489 2607 ntTSL 5 BASIC14.16□□□□□ -0.14
TFF3Q07654 PROC-201ENST00000234071 1773 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
TFF3Q07654 LSP1-203ENST00000405957 1785 ntAPPRIS ALT2 TSL 5 BASIC14.16□□□□□ -0.14
TFF3Q07654 TMEM150A-203ENST00000409668 1776 ntAPPRIS P1 TSL 2 BASIC14.16□□□□□ -0.14
TFF3Q07654 CHGA-201ENST00000216492 2063 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
TFF3Q07654 ACTN4-201ENST00000252699 4963 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
TFF3Q07654 CA12-203ENST00000422263 2556 ntTSL 2 BASIC14.16□□□□□ -0.14
TFF3Q07654 MAP3K9-206ENST00000555993 4449 ntAPPRIS P3 TSL 1 (best) BASIC14.16□□□□□ -0.14
TFF3Q07654 UCHL5-206ENST00000367455 5327 ntAPPRIS P3 TSL 1 (best) BASIC14.16□□□□□ -0.14
TFF3Q07654 SUSD4-202ENST00000343846 3480 ntAPPRIS P1 TSL 2 BASIC14.16□□□□□ -0.14
Retrieved 100 of 98,524 protein–RNA pairs in 39.3 ms