Protein–RNA interactions for Protein: P56915

GSC, Homeobox protein goosecoid, humanhuman

Predicted RBP Predictions only

Length 257 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
GSCP56915 AL355974.2-202ENST00000617298 936 ntTSL 3 BASIC17.08■□□□□ 0.32
GSCP56915 TBC1D4-204ENST00000431480 6347 ntAPPRIS ALT2 TSL 1 (best) BASIC17.08■□□□□ 0.32
GSCP56915 AC107871.1-202ENST00000562767 3389 ntAPPRIS P1 TSL 3 BASIC17.08■□□□□ 0.32
GSCP56915 FADS2-201ENST00000257261 2964 ntTSL 1 (best) BASIC17.08■□□□□ 0.32
GSCP56915 KLF4-201ENST00000374672 2813 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
GSCP56915 LINC01565-201ENST00000356020 2697 ntTSL 2 BASIC17.08■□□□□ 0.32
GSCP56915 PRKCZ-202ENST00000400921 2294 ntTSL 1 (best) BASIC17.08■□□□□ 0.32
GSCP56915 BTNL9-201ENST00000327705 3500 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
GSCP56915 ATP6AP2-215ENST00000636409 1962 ntAPPRIS ALT2 TSL 2 BASIC17.08■□□□□ 0.32
GSCP56915 AC068831.3-201ENST00000553321 1858 ntTSL 2 BASIC17.07■□□□□ 0.32
GSCP56915 RNPS1-223ENST00000568631 1792 ntAPPRIS P1 TSL 5 BASIC17.07■□□□□ 0.32
GSCP56915 DRG1-201ENST00000331457 1746 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
GSCP56915 CACFD1-206ENST00000540581 2880 ntAPPRIS ALT2 TSL 2 BASIC17.07■□□□□ 0.32
GSCP56915 CFLAR-214ENST00000443227 1679 ntTSL 2 BASIC17.07■□□□□ 0.32
GSCP56915 MCF2L-232ENST00000535094 3752 ntAPPRIS ALT2 TSL 2 BASIC17.07■□□□□ 0.32
GSCP56915 SUPT20HL2-201ENST00000486479 2409 ntBASIC17.07■□□□□ 0.32
GSCP56915 AC010619.2-201ENST00000595815 1421 ntTSL 2 BASIC17.07■□□□□ 0.32
GSCP56915 TAOK2-202ENST00000308893 5169 ntAPPRIS P4 TSL 1 (best) BASIC17.07■□□□□ 0.32
GSCP56915 HEY1-208ENST00000523976 1325 ntTSL 2 BASIC17.07■□□□□ 0.32
GSCP56915 PODN-201ENST00000312553 3010 ntAPPRIS P3 TSL 1 (best) BASIC17.07■□□□□ 0.32
GSCP56915 CBR1-202ENST00000399191 838 ntTSL 3 BASIC17.07■□□□□ 0.32
GSCP56915 ZFAND2B-207ENST00000409412 569 ntTSL 2 BASIC17.07■□□□□ 0.32
GSCP56915 AC005281.1-201ENST00000433040 911 ntTSL 5 BASIC17.07■□□□□ 0.32
GSCP56915 TMEM176A-202ENST00000461345 635 ntAPPRIS ALT2 TSL 5 BASIC17.07■□□□□ 0.32
GSCP56915 RAB7A-204ENST00000483906 533 ntTSL 3 BASIC17.07■□□□□ 0.32
GSCP56915 RPS3A-212ENST00000514682 985 ntTSL 5 BASIC17.07■□□□□ 0.32
GSCP56915 SNHG6-201ENST00000520348 648 ntTSL 2 BASIC17.07■□□□□ 0.32
GSCP56915 C17orf49-203ENST00000546760 764 ntTSL 5 BASIC17.07■□□□□ 0.32
GSCP56915 AL390334.1-205ENST00000555797 411 ntTSL 3 BASIC17.07■□□□□ 0.32
GSCP56915 AC005829.1-201ENST00000570002 483 ntBASIC17.07■□□□□ 0.32
GSCP56915 AC024267.1-201ENST00000582320 895 ntBASIC17.07■□□□□ 0.32
GSCP56915 KF456478.1-201ENST00000585980 472 ntTSL 3 BASIC17.07■□□□□ 0.32
GSCP56915 MYO1B-202ENST00000339514 5026 ntTSL 1 (best) BASIC17.07■□□□□ 0.32
GSCP56915 LINC01136-203ENST00000457348 2539 ntTSL 2 BASIC17.07■□□□□ 0.32
GSCP56915 SLC11A2-204ENST00000541174 2470 ntAPPRIS P3 TSL 1 (best) BASIC17.07■□□□□ 0.32
GSCP56915 LIMS2-217ENST00000545738 1730 ntTSL 5 BASIC17.07■□□□□ 0.32
GSCP56915 DIRAS2-201ENST00000375765 4386 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
GSCP56915 TMEM86B-201ENST00000327042 1637 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
GSCP56915 ACE-203ENST00000413513 2237 ntTSL 2 BASIC17.06■□□□□ 0.32
GSCP56915 TPBG-202ENST00000535040 3392 ntAPPRIS P1 TSL 2 BASIC17.06■□□□□ 0.32
GSCP56915 SEPT4-201ENST00000317256 1530 ntAPPRIS ALT2 TSL 1 (best) BASIC17.06■□□□□ 0.32
GSCP56915 CLDND1-222ENST00000510545 2124 ntAPPRIS P1 TSL 5 BASIC17.06■□□□□ 0.32
GSCP56915 AP001282.1-201ENST00000531301 1499 ntBASIC17.06■□□□□ 0.32
GSCP56915 PTEN-201ENST00000371953 9027 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
GSCP56915 DCLK2-201ENST00000296550 4265 ntAPPRIS P3 TSL 1 (best) BASIC17.06■□□□□ 0.32
GSCP56915 RNLS-201ENST00000331772 1447 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
GSCP56915 FAM135A-209ENST00000505769 4806 ntTSL 5 BASIC17.06■□□□□ 0.32
GSCP56915 RAF1-205ENST00000442415 3085 ntTSL 5 BASIC17.06■□□□□ 0.32
GSCP56915 CACNA1A-247ENST00000637769 8648 ntAPPRIS ALT2 TSL 1 (best) BASIC17.06■□□□□ 0.32
GSCP56915 LINC02381-201ENST00000508564 1369 ntTSL 1 (best) BASIC17.06■□□□□ 0.32
GSCP56915 NPHP4-211ENST00000622020 3004 ntTSL 5 BASIC17.06■□□□□ 0.32
GSCP56915 AC010642.2-201ENST00000634676 2413 ntTSL 5 BASIC17.06■□□□□ 0.32
GSCP56915 CORO1A-208ENST00000565497 1348 ntTSL 5 BASIC17.06■□□□□ 0.32
GSCP56915 SLC39A1-203ENST00000368621 2398 ntAPPRIS P1 TSL 2 BASIC17.06■□□□□ 0.32
GSCP56915 RPS23-201ENST00000296674 3437 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
GSCP56915 TMEM53-203ENST00000372242 1846 ntTSL 3 BASIC17.06■□□□□ 0.32
GSCP56915 SELENOF-208ENST00000616787 1835 ntAPPRIS ALT1 TSL 5 BASIC17.06■□□□□ 0.32
GSCP56915 TRAPPC1-201ENST00000303731 811 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
GSCP56915 YIF1B-201ENST00000329420 964 ntTSL 3 BASIC17.06■□□□□ 0.32
GSCP56915 STOM-202ENST00000347359 870 ntTSL 2 BASIC17.06■□□□□ 0.32
GSCP56915 PP14571-201ENST00000404327 934 ntTSL 2 BASIC17.06■□□□□ 0.32
GSCP56915 COA5-202ENST00000409997 557 ntTSL 4 BASIC17.06■□□□□ 0.32
GSCP56915 CR559946.1-201ENST00000453835 531 ntTSL 4 BASIC17.06■□□□□ 0.32
GSCP56915 AC080075.1-201ENST00000469747 427 ntTSL 2 BASIC17.06■□□□□ 0.32
GSCP56915 GALNT9-208ENST00000541995 1001 ntTSL 1 (best) BASIC17.06■□□□□ 0.32
GSCP56915 AC008127.1-201ENST00000548424 499 ntTSL 5 BASIC17.06■□□□□ 0.32
GSCP56915 NDUFAB1-205ENST00000570319 885 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
GSCP56915 AC105339.1-204ENST00000636249 355 ntBASIC17.06■□□□□ 0.32
GSCP56915 KRT35-201ENST00000246639 1778 ntTSL 1 (best) BASIC17.06■□□□□ 0.32
GSCP56915 UNC5C-202ENST00000504962 1789 ntTSL 2 BASIC17.06■□□□□ 0.32
GSCP56915 POU5F1-204ENST00000471529 1723 ntTSL 1 (best) BASIC17.06■□□□□ 0.32
GSCP56915 AC005906.2-217ENST00000639573 1711 ntTSL 5 BASIC17.06■□□□□ 0.32
GSCP56915 CPT2-201ENST00000371486 3094 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
GSCP56915 MSI2-204ENST00000442934 1624 ntTSL 2 BASIC17.06■□□□□ 0.32
GSCP56915 TMPRSS4-201ENST00000437212 2074 ntAPPRIS P3 TSL 1 (best) BASIC17.06■□□□□ 0.32
GSCP56915 LYAR-201ENST00000343470 1569 ntAPPRIS P2 TSL 1 (best) BASIC17.06■□□□□ 0.32
GSCP56915 ARC-201ENST00000356613 2948 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
GSCP56915 AC019205.2-202ENST00000441363 2403 ntTSL 5 BASIC17.06■□□□□ 0.32
GSCP56915 OSGIN1-201ENST00000343939 2391 ntTSL 2 BASIC17.06■□□□□ 0.32
GSCP56915 RUBCNL-204ENST00000378797 3206 ntAPPRIS ALT2 TSL 1 (best) BASIC17.06■□□□□ 0.32
GSCP56915 SNAP47-213ENST00000617596 1905 ntAPPRIS ALT2 TSL 1 (best) BASIC17.06■□□□□ 0.32
GSCP56915 PATZ1-203ENST00000351933 3638 ntTSL 1 (best) BASIC17.06■□□□□ 0.32
GSCP56915 AC114490.1-201ENST00000417456 3163 ntTSL 2 BASIC17.05■□□□□ 0.32
GSCP56915 FBF1-205ENST00000586717 4825 ntAPPRIS ALT2 TSL 5 BASIC17.05■□□□□ 0.32
GSCP56915 SEPT8-205ENST00000378701 1817 ntTSL 2 BASIC17.05■□□□□ 0.32
GSCP56915 DCP1B-202ENST00000535873 2231 ntTSL 2 BASIC17.05■□□□□ 0.32
GSCP56915 HPGD-202ENST00000296522 3027 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
GSCP56915 TRA2B-205ENST00000453386 2952 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
GSCP56915 CLEC17A-202ENST00000417570 1399 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
GSCP56915 IRF3-217ENST00000597198 1741 ntAPPRIS P1 TSL 2 BASIC17.05■□□□□ 0.32
GSCP56915 COMP-201ENST00000222271 2461 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
GSCP56915 PLAGL1-211ENST00000625622 3216 ntAPPRIS P1 TSL 2 BASIC17.05■□□□□ 0.32
GSCP56915 RHD-207ENST00000454452 1303 ntTSL 1 (best) BASIC17.05■□□□□ 0.32
GSCP56915 DBNDD1-202ENST00000304733 2081 ntTSL 1 (best) BASIC17.05■□□□□ 0.32
GSCP56915 SHISA5-219ENST00000612611 1677 ntTSL 5 BASIC17.05■□□□□ 0.32
GSCP56915 ATG13-216ENST00000530500 2030 ntTSL 2 BASIC17.05■□□□□ 0.32
GSCP56915 TPD52L2-201ENST00000217121 2362 ntTSL 2 BASIC17.05■□□□□ 0.32
GSCP56915 PIK3IP1-203ENST00000441972 2374 ntTSL 2 BASIC17.05■□□□□ 0.32
GSCP56915 CCDC12-201ENST00000292314 1017 ntTSL 5 BASIC17.05■□□□□ 0.32
GSCP56915 ITGA9-AS1-201ENST00000366441 895 ntTSL 3 BASIC17.05■□□□□ 0.32
Retrieved 100 of 98,524 protein–RNA pairs in 28.7 ms