Protein–RNA interactions for Protein: P55160

NCKAP1L, Nck-associated protein 1-like, humanhuman

Predictions only

Length 1,127 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NCKAP1LP55160 PAX5-207ENST00000446742 885 ntTSL 1 (best) BASIC17.61■□□□□ 0.41
NCKAP1LP55160 ELP6-209ENST00000446787 894 ntTSL 3 BASIC17.61■□□□□ 0.41
NCKAP1LP55160 SSBP1-214ENST00000498107 636 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
NCKAP1LP55160 IGHV3-42-201ENST00000520410 361 ntBASIC17.61■□□□□ 0.41
NCKAP1LP55160 TRMT112-206ENST00000544844 1106 ntAPPRIS P3 TSL 1 (best) BASIC17.61■□□□□ 0.41
NCKAP1LP55160 AL583722.3-202ENST00000554954 486 ntTSL 4 BASIC17.61■□□□□ 0.41
NCKAP1LP55160 RAB3D-202ENST00000589655 924 ntAPPRIS P1 TSL 2 BASIC17.61■□□□□ 0.41
NCKAP1LP55160 AC016168.1-201ENST00000591422 722 ntTSL 3 BASIC17.61■□□□□ 0.41
NCKAP1LP55160 LINC00237-203ENST00000593272 630 ntTSL 4 BASIC17.61■□□□□ 0.41
NCKAP1LP55160 AL590560.3-201ENST00000623350 461 ntBASIC17.61■□□□□ 0.41
NCKAP1LP55160 HEY1-208ENST00000523976 1325 ntTSL 2 BASIC17.61■□□□□ 0.41
NCKAP1LP55160 ACE-203ENST00000413513 2237 ntTSL 2 BASIC17.61■□□□□ 0.41
NCKAP1LP55160 CLEC18A-209ENST00000615430 2215 ntAPPRIS P2 TSL 5 BASIC17.61■□□□□ 0.41
NCKAP1LP55160 CLEC18C-211ENST00000618957 2215 ntAPPRIS P2 TSL 5 BASIC17.61■□□□□ 0.41
NCKAP1LP55160 CLEC18B-205ENST00000619275 2215 ntAPPRIS ALT2 TSL 5 BASIC17.61■□□□□ 0.41
NCKAP1LP55160 CDKN1A-203ENST00000405375 2267 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
NCKAP1LP55160 HYAL1-202ENST00000320295 2324 ntAPPRIS P1 TSL 2 BASIC17.61■□□□□ 0.41
NCKAP1LP55160 LRRC58-201ENST00000295628 7903 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
NCKAP1LP55160 FBXO22-202ENST00000453211 1486 ntTSL 2 BASIC17.61■□□□□ 0.41
NCKAP1LP55160 OCIAD1-202ENST00000381473 1594 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
NCKAP1LP55160 C1RL-210ENST00000544702 1569 ntTSL 1 (best) BASIC17.61■□□□□ 0.41
NCKAP1LP55160 CASZ1-202ENST00000377022 7936 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
NCKAP1LP55160 CCT7-216ENST00000540468 1674 ntTSL 2 BASIC17.61■□□□□ 0.41
NCKAP1LP55160 NEUROD1-201ENST00000295108 2852 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
NCKAP1LP55160 PTGDR2-201ENST00000332539 2895 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
NCKAP1LP55160 RNF34-202ENST00000392464 1722 ntTSL 5 BASIC17.61■□□□□ 0.41
NCKAP1LP55160 CNGA4-201ENST00000379936 1863 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
NCKAP1LP55160 SPDEF-202ENST00000544425 1866 ntAPPRIS ALT1 TSL 2 BASIC17.61■□□□□ 0.41
NCKAP1LP55160 OLIG2-201ENST00000333337 3262 ntAPPRIS P1 BASIC17.6■□□□□ 0.41
NCKAP1LP55160 ZNF398-203ENST00000483892 2121 ntTSL 5 BASIC17.6■□□□□ 0.41
NCKAP1LP55160 SLC27A1-201ENST00000252595 3594 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
NCKAP1LP55160 FADS2-202ENST00000278840 3630 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
NCKAP1LP55160 HDHD2-201ENST00000300605 2212 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
NCKAP1LP55160 MRPL57-201ENST00000309594 2246 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
NCKAP1LP55160 ELAVL2-208ENST00000544538 3789 ntAPPRIS P3 TSL 5 BASIC17.6■□□□□ 0.41
NCKAP1LP55160 NSUN5-203ENST00000428206 2269 ntAPPRIS ALT2 TSL 2 BASIC17.6■□□□□ 0.41
NCKAP1LP55160 RASGRP2-201ENST00000354024 2310 ntAPPRIS P2 TSL 1 (best) BASIC17.6■□□□□ 0.41
NCKAP1LP55160 PPP1R15A-201ENST00000200453 2378 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
NCKAP1LP55160 KLC4-202ENST00000347162 2404 ntAPPRIS ALT2 TSL 1 (best) BASIC17.6■□□□□ 0.41
NCKAP1LP55160 IQSEC2-202ENST00000396435 6015 ntAPPRIS ALT2 TSL 1 (best) BASIC17.6■□□□□ 0.41
NCKAP1LP55160 PPP1R21-206ENST00000449090 3049 ntTSL 1 (best) BASIC17.6■□□□□ 0.41
NCKAP1LP55160 TBC1D2-205ENST00000465784 3349 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
NCKAP1LP55160 TRIM45-203ENST00000369464 3495 ntTSL 1 (best) BASIC17.6■□□□□ 0.41
NCKAP1LP55160 SLC9A5-201ENST00000299798 3736 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
NCKAP1LP55160 LCE5A-201ENST00000334269 819 ntAPPRIS P1 TSL 3 BASIC17.6■□□□□ 0.41
NCKAP1LP55160 HDAC8-202ENST00000373556 704 ntTSL 2 BASIC17.6■□□□□ 0.41
NCKAP1LP55160 C1QA-201ENST00000374642 1143 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
NCKAP1LP55160 CENPM-206ENST00000407253 818 ntTSL 2 BASIC17.6■□□□□ 0.41
NCKAP1LP55160 AL365255.1-202ENST00000413887 363 ntTSL 5 BASIC17.6■□□□□ 0.41
NCKAP1LP55160 AC241585.1-201ENST00000433527 519 ntBASIC17.6■□□□□ 0.41
NCKAP1LP55160 NECAP2-203ENST00000457722 935 ntTSL 2 BASIC17.6■□□□□ 0.41
NCKAP1LP55160 PRICKLE2-AS1-203ENST00000476308 623 ntTSL 2 BASIC17.6■□□□□ 0.41
NCKAP1LP55160 PTK7-212ENST00000476760 902 ntTSL 2 BASIC17.6■□□□□ 0.41
NCKAP1LP55160 TSC22D3-213ENST00000506081 956 ntTSL 5 BASIC17.6■□□□□ 0.41
NCKAP1LP55160 CNOT8-210ENST00000519404 945 ntTSL 2 BASIC17.6■□□□□ 0.41
NCKAP1LP55160 AC064807.1-203ENST00000520357 575 ntTSL 5 BASIC17.6■□□□□ 0.41
NCKAP1LP55160 CNOT8-214ENST00000520671 923 ntTSL 2 BASIC17.6■□□□□ 0.41
NCKAP1LP55160 CNOT8-218ENST00000521583 1151 ntTSL 1 (best) BASIC17.6■□□□□ 0.41
NCKAP1LP55160 AL512361.1-201ENST00000554200 418 ntBASIC17.6■□□□□ 0.41
NCKAP1LP55160 DUT-210ENST00000559935 569 ntTSL 3 BASIC17.6■□□□□ 0.41
NCKAP1LP55160 MPI-209ENST00000564003 1195 ntTSL 2 BASIC17.6■□□□□ 0.41
NCKAP1LP55160 AL031717.1-201ENST00000569670 565 ntTSL 4 BASIC17.6■□□□□ 0.41
NCKAP1LP55160 AC129926.1-201ENST00000581944 614 ntTSL 2 BASIC17.6■□□□□ 0.41
NCKAP1LP55160 SPIB-207ENST00000597855 564 ntTSL 4 BASIC17.6■□□□□ 0.41
NCKAP1LP55160 AL844908.2-201ENST00000609461 460 ntBASIC17.6■□□□□ 0.41
NCKAP1LP55160 AL390754.1-201ENST00000619088 582 ntBASIC17.6■□□□□ 0.41
NCKAP1LP55160 AC087499.5-201ENST00000452760 1342 ntBASIC17.6■□□□□ 0.41
NCKAP1LP55160 CDIP1-206ENST00000563507 1463 ntTSL 2 BASIC17.6■□□□□ 0.41
NCKAP1LP55160 CDH23-205ENST00000398809 4533 ntTSL 5 BASIC17.6■□□□□ 0.41
NCKAP1LP55160 ABCA1-203ENST00000423487 1540 ntTSL 2 BASIC17.6■□□□□ 0.41
NCKAP1LP55160 PIP4K2C-207ENST00000550465 1532 ntTSL 2 BASIC17.6■□□□□ 0.41
NCKAP1LP55160 KRT27-201ENST00000301656 1612 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
NCKAP1LP55160 AC009802.1-201ENST00000637973 1609 ntTSL 5 BASIC17.6■□□□□ 0.41
NCKAP1LP55160 SH3BP4-202ENST00000392011 5194 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
NCKAP1LP55160 OXCT1-AS1-201ENST00000508458 1731 ntTSL 3 BASIC17.6■□□□□ 0.41
NCKAP1LP55160 MFSD4A-207ENST00000536357 1841 ntTSL 2 BASIC17.6■□□□□ 0.41
NCKAP1LP55160 GABRA5-202ENST00000355395 2183 ntAPPRIS P1 TSL 5 BASIC17.6■□□□□ 0.41
NCKAP1LP55160 LRRFIP1P1-201ENST00000498774 2246 ntBASIC17.6■□□□□ 0.41
NCKAP1LP55160 VASP-201ENST00000245932 2305 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
NCKAP1LP55160 DIABLO-208ENST00000464942 2569 ntTSL 1 (best) BASIC17.6■□□□□ 0.41
NCKAP1LP55160 BMP1-201ENST00000306349 2626 ntTSL 1 (best) BASIC17.6■□□□□ 0.41
NCKAP1LP55160 ZCCHC3-201ENST00000500893 3354 ntAPPRIS P1 BASIC17.6■□□□□ 0.41
NCKAP1LP55160 RASSF5-205ENST00000581503 5586 ntTSL 1 (best) BASIC17.6■□□□□ 0.41
NCKAP1LP55160 EFNB3-201ENST00000226091 3222 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
NCKAP1LP55160 GFM1-208ENST00000478576 2147 ntTSL 2 BASIC17.59■□□□□ 0.41
NCKAP1LP55160 HPCAL1-207ENST00000620771 1941 ntAPPRIS P1 TSL 2 BASIC17.59■□□□□ 0.41
NCKAP1LP55160 MAGEA8-201ENST00000286482 1778 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
NCKAP1LP55160 PTP4A1-201ENST00000370651 5088 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
NCKAP1LP55160 TRPM2-208ENST00000621064 1669 ntTSL 5 BASIC17.59■□□□□ 0.41
NCKAP1LP55160 CRLF2-203ENST00000400841 1639 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
NCKAP1LP55160 COLEC11-209ENST00000418971 1595 ntTSL 2 BASIC17.59■□□□□ 0.41
NCKAP1LP55160 RBFOX3-212ENST00000584778 1547 ntAPPRIS ALT2 TSL 5 BASIC17.59■□□□□ 0.41
NCKAP1LP55160 AKAP9-205ENST00000394564 1356 ntTSL 1 (best) BASIC17.59■□□□□ 0.41
NCKAP1LP55160 SPAG7-201ENST00000206020 1058 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
NCKAP1LP55160 CBX2-201ENST00000269399 1061 ntTSL 1 (best) BASIC17.59■□□□□ 0.41
NCKAP1LP55160 MRPL43-201ENST00000299179 747 ntTSL 1 (best) BASIC17.59■□□□□ 0.41
NCKAP1LP55160 MRPL13-201ENST00000306185 1086 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
NCKAP1LP55160 NUDT4P1-201ENST00000322209 1206 ntAPPRIS P1 BASIC17.59■□□□□ 0.41
NCKAP1LP55160 SIVA1-202ENST00000347067 550 ntTSL 1 (best) BASIC17.59■□□□□ 0.41
NCKAP1LP55160 ASB12-201ENST00000362002 1289 ntAPPRIS P1 TSL 2 BASIC17.59■□□□□ 0.41
Retrieved 100 of 98,524 protein–RNA pairs in 29.9 ms