Protein–RNA interactions for Protein: P48728

AMT, Aminomethyltransferase, mitochondrial, humanhuman

Predictions only

Length 403 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
AMTP48728 PCDHA5-201ENST00000529619 4157 ntTSL 1 (best) BASIC12.27□□□□□ -0.45
AMTP48728 COL11A2-204ENST00000395194 1194 ntTSL 1 (best) BASIC12.27□□□□□ -0.45
AMTP48728 PAX3-208ENST00000409828 1254 ntTSL 1 (best) BASIC12.27□□□□□ -0.45
AMTP48728 AC074183.1-201ENST00000439105 782 ntTSL 5 BASIC12.27□□□□□ -0.45
AMTP48728 HMGB3P22-201ENST00000442010 597 ntTSL 2 BASIC12.27□□□□□ -0.45
AMTP48728 AC026471.3-201ENST00000565137 578 ntTSL 2 BASIC12.27□□□□□ -0.45
AMTP48728 AC009061.1-201ENST00000567261 475 ntTSL 3 BASIC12.27□□□□□ -0.45
AMTP48728 AC006942.1-201ENST00000600669 520 ntTSL 2 BASIC12.27□□□□□ -0.45
AMTP48728 CYB561D2-210ENST00000607121 1004 ntTSL 2 BASIC12.27□□□□□ -0.45
AMTP48728 SLF2-205ENST00000609386 891 ntAPPRIS ALT2 BASIC12.27□□□□□ -0.45
AMTP48728 ANKRD20A8P-203ENST00000641373 517 ntBASIC12.27□□□□□ -0.45
AMTP48728 CCNF-202ENST00000397066 4283 ntAPPRIS P1 TSL 1 (best) BASIC12.27□□□□□ -0.45
AMTP48728 LHX1-201ENST00000614239 3425 ntAPPRIS P1 TSL 1 (best) BASIC12.27□□□□□ -0.45
AMTP48728 USP19-208ENST00000453664 4719 ntAPPRIS ALT2 TSL 2 BASIC12.27□□□□□ -0.45
AMTP48728 CCDC144B-202ENST00000445752 2197 ntTSL 2 BASIC12.27□□□□□ -0.45
AMTP48728 SFXN3-202ENST00000393459 3098 ntAPPRIS P1 TSL 5 BASIC12.27□□□□□ -0.45
AMTP48728 TMCO3-202ENST00000434316 3050 ntAPPRIS P1 TSL 1 (best) BASIC12.27□□□□□ -0.45
AMTP48728 H1FNT-201ENST00000335017 1300 ntAPPRIS P1 BASIC12.27□□□□□ -0.45
AMTP48728 ZDHHC15-201ENST00000373367 5796 ntAPPRIS P3 TSL 1 (best) BASIC12.27□□□□□ -0.45
AMTP48728 ARHGAP27P1-BPTFP1-KPNA2P3-201ENST00000578492 2732 ntTSL 2 BASIC12.27□□□□□ -0.45
AMTP48728 PCSK2-205ENST00000536609 2275 ntTSL 2 BASIC12.27□□□□□ -0.45
AMTP48728 C1QTNF1-209ENST00000581774 1368 ntAPPRIS P1 TSL 1 (best) BASIC12.27□□□□□ -0.45
AMTP48728 SLC25A35-201ENST00000380067 2785 ntTSL 2 BASIC12.27□□□□□ -0.45
AMTP48728 AFF1-201ENST00000307808 9390 ntAPPRIS P3 TSL 1 (best) BASIC12.27□□□□□ -0.45
AMTP48728 SEPT9-228ENST00000590294 2816 ntAPPRIS ALT2 TSL 5 BASIC12.27□□□□□ -0.45
AMTP48728 ROBO4-201ENST00000306534 4710 ntAPPRIS P1 TSL 1 (best) BASIC12.27□□□□□ -0.45
AMTP48728 DENND3-202ENST00000424248 4740 ntTSL 1 (best) BASIC12.27□□□□□ -0.45
AMTP48728 SLC39A1-203ENST00000368621 2398 ntAPPRIS P1 TSL 2 BASIC12.27□□□□□ -0.45
AMTP48728 MPL-201ENST00000372470 1908 ntAPPRIS P2 TSL 1 (best) BASIC12.27□□□□□ -0.45
AMTP48728 TRNT1-205ENST00000402675 1935 ntTSL 2 BASIC12.27□□□□□ -0.45
AMTP48728 SGK2-206ENST00000423407 1915 ntAPPRIS P1 TSL 1 (best) BASIC12.27□□□□□ -0.45
AMTP48728 PTK7-210ENST00000471863 2412 ntTSL 1 (best) BASIC12.27□□□□□ -0.45
AMTP48728 OPCML-IT1-201ENST00000533859 2936 ntTSL 2 BASIC12.27□□□□□ -0.45
AMTP48728 FAM53B-AS1-202ENST00000448422 1491 ntTSL 1 (best) BASIC12.27□□□□□ -0.45
AMTP48728 GOLGA5-201ENST00000163416 2969 ntAPPRIS P1 TSL 1 (best) BASIC12.27□□□□□ -0.45
AMTP48728 PARP10-201ENST00000313028 3497 ntAPPRIS P3 TSL 1 (best) BASIC12.27□□□□□ -0.45
AMTP48728 UBE2D4-201ENST00000222402 3974 ntAPPRIS P1 TSL 1 (best) BASIC12.27□□□□□ -0.45
AMTP48728 LINC00311-201ENST00000366314 1566 ntTSL 1 (best) BASIC12.26□□□□□ -0.45
AMTP48728 AC242426.3-201ENST00000440377 1571 ntTSL 2 BASIC12.26□□□□□ -0.45
AMTP48728 UBA5-202ENST00000356232 3705 ntAPPRIS P1 TSL 1 (best) BASIC12.26□□□□□ -0.45
AMTP48728 SERPINB6-201ENST00000335686 1604 ntAPPRIS P1 TSL 1 (best) BASIC12.26□□□□□ -0.45
AMTP48728 JPT1-203ENST00000409753 1605 ntAPPRIS P1 TSL 1 (best) BASIC12.26□□□□□ -0.45
AMTP48728 UBTF-204ENST00000436088 2738 ntAPPRIS P1 TSL 2 BASIC12.26□□□□□ -0.45
AMTP48728 FECH-201ENST00000262093 3853 ntAPPRIS P3 TSL 1 (best) BASIC12.26□□□□□ -0.45
AMTP48728 HOXA3-201ENST00000317201 2761 ntAPPRIS P1 TSL 5 BASIC12.26□□□□□ -0.45
AMTP48728 SWSAP1-201ENST00000312423 1684 ntAPPRIS P1 TSL 1 (best) BASIC12.26□□□□□ -0.45
AMTP48728 COL9A2-202ENST00000372748 2862 ntAPPRIS P1 TSL 1 (best) BASIC12.26□□□□□ -0.45
AMTP48728 SUSD6-201ENST00000342745 5388 ntAPPRIS P1 TSL 1 (best) BASIC12.26□□□□□ -0.45
AMTP48728 STOML1-206ENST00000561656 1833 ntTSL 3 BASIC12.26□□□□□ -0.45
AMTP48728 ALDH1B1-201ENST00000377698 3066 ntAPPRIS P1 TSL 1 (best) BASIC12.26□□□□□ -0.45
AMTP48728 STRA6-218ENST00000574278 2455 ntTSL 2 BASIC12.26□□□□□ -0.45
AMTP48728 KLHDC8A-202ENST00000367156 3177 ntAPPRIS P1 TSL 2 BASIC12.26□□□□□ -0.45
AMTP48728 DTX3-202ENST00000548198 3199 ntAPPRIS P3 TSL 2 BASIC12.26□□□□□ -0.45
AMTP48728 TSPO2-202ENST00000373161 958 ntAPPRIS P1 TSL 1 (best) BASIC12.26□□□□□ -0.45
AMTP48728 CALML5-201ENST00000380332 859 ntAPPRIS P1 BASIC12.26□□□□□ -0.45
AMTP48728 PLEKHB2-203ENST00000404460 1167 ntTSL 2 BASIC12.26□□□□□ -0.45
AMTP48728 TSPO2-203ENST00000470917 699 ntAPPRIS P1 TSL 1 (best) BASIC12.26□□□□□ -0.45
AMTP48728 AP003733.1-201ENST00000491725 852 ntBASIC12.26□□□□□ -0.45
AMTP48728 KHDRBS1-204ENST00000492989 1215 ntTSL 1 (best) BASIC12.26□□□□□ -0.45
AMTP48728 ZNF444P1-201ENST00000559497 298 ntBASIC12.26□□□□□ -0.45
AMTP48728 FAM104A-205ENST00000581110 512 ntTSL 2 BASIC12.26□□□□□ -0.45
AMTP48728 LRRC23-215ENST00000622489 1061 ntTSL 5 BASIC12.26□□□□□ -0.45
AMTP48728 AC008735.6-201ENST00000635964 1292 ntAPPRIS P1 TSL 2 BASIC12.26□□□□□ -0.45
AMTP48728 CYB5D2-201ENST00000301391 1910 ntAPPRIS P1 TSL 1 (best) BASIC12.26□□□□□ -0.45
AMTP48728 DKFZP434H168-201ENST00000567381 1905 ntBASIC12.26□□□□□ -0.45
AMTP48728 TRIP10-208ENST00000596758 1920 ntTSL 1 (best) BASIC12.26□□□□□ -0.45
AMTP48728 PTPN9-201ENST00000306726 3862 ntAPPRIS ALT2 TSL 5 BASIC12.26□□□□□ -0.45
AMTP48728 NDUFA10-202ENST00000307300 1313 ntTSL 1 (best) BASIC12.26□□□□□ -0.45
AMTP48728 SMC5-201ENST00000361138 5980 ntAPPRIS P1 TSL 1 (best) BASIC12.26□□□□□ -0.45
AMTP48728 PRDM16-201ENST00000270722 8690 ntAPPRIS P3 TSL 1 (best) BASIC12.26□□□□□ -0.45
AMTP48728 TFAP2A-201ENST00000319516 2035 ntTSL 5 BASIC12.26□□□□□ -0.45
AMTP48728 ZNF208-205ENST00000601773 2027 ntTSL 2 BASIC12.26□□□□□ -0.45
AMTP48728 AMPD2-218ENST00000528454 2728 ntTSL 2 BASIC12.26□□□□□ -0.45
AMTP48728 EML5-207ENST00000554922 9570 ntAPPRIS P1 TSL 5 BASIC12.26□□□□□ -0.45
AMTP48728 BAK1-201ENST00000360661 2132 ntTSL 5 BASIC12.26□□□□□ -0.45
AMTP48728 SREK1-216ENST00000612404 2128 ntTSL 1 (best) BASIC12.26□□□□□ -0.45
AMTP48728 C6orf203-202ENST00000405204 1420 ntAPPRIS P1 TSL 2 BASIC12.26□□□□□ -0.45
AMTP48728 MARS-201ENST00000262027 2905 ntAPPRIS P1 TSL 1 (best) BASIC12.26□□□□□ -0.45
AMTP48728 SEMA3B-212ENST00000616701 2958 ntAPPRIS P3 TSL 1 (best) BASIC12.26□□□□□ -0.45
AMTP48728 DLGAP1-204ENST00000400149 5203 ntTSL 5 BASIC12.26□□□□□ -0.45
AMTP48728 TMEM101-201ENST00000206380 1536 ntAPPRIS P1 TSL 1 (best) BASIC12.26□□□□□ -0.45
AMTP48728 RASL11A-201ENST00000241463 1543 ntAPPRIS P1 TSL 1 (best) BASIC12.26□□□□□ -0.45
AMTP48728 PARVB-210ENST00000619710 1530 ntTSL 1 (best) BASIC12.26□□□□□ -0.45
AMTP48728 DDX56-201ENST00000258772 2336 ntAPPRIS P1 TSL 1 (best) BASIC12.26□□□□□ -0.45
AMTP48728 TFAM-204ENST00000487519 5414 ntAPPRIS P1 TSL 1 (best) BASIC12.26□□□□□ -0.45
AMTP48728 MSL2-201ENST00000309993 4692 ntAPPRIS P1 TSL 1 (best) BASIC12.26□□□□□ -0.45
AMTP48728 CAMK2B-203ENST00000347193 1577 ntTSL 1 (best) BASIC12.26□□□□□ -0.45
AMTP48728 BX276092.9-201ENST00000636797 1563 ntAPPRIS ALT2 TSL 5 BASIC12.26□□□□□ -0.45
AMTP48728 PDK2-201ENST00000007708 2384 ntTSL 2 BASIC12.26□□□□□ -0.45
AMTP48728 GRWD1-201ENST00000253237 5571 ntAPPRIS P1 TSL 1 (best) BASIC12.26□□□□□ -0.45
AMTP48728 SPTBN2-204ENST00000529997 8085 ntTSL 5 BASIC12.26□□□□□ -0.45
AMTP48728 MUL1-201ENST00000264198 2438 ntAPPRIS P1 TSL 1 (best) BASIC12.26□□□□□ -0.45
AMTP48728 PC-208ENST00000529047 1607 ntTSL 3 BASIC12.26□□□□□ -0.45
AMTP48728 ZBED3-AS1-208ENST00000512001 1668 ntTSL 3 BASIC12.26□□□□□ -0.45
AMTP48728 AC016027.1-202ENST00000607927 1699 ntBASIC12.26□□□□□ -0.45
AMTP48728 PRRT2-202ENST00000358758 2567 ntAPPRIS P1 TSL 1 (best) BASIC12.25□□□□□ -0.45
AMTP48728 CLPTM1L-209ENST00000507807 1740 ntTSL 1 (best) BASIC12.25□□□□□ -0.45
AMTP48728 PIGT-257ENST00000640210 1715 ntTSL 5 BASIC12.25□□□□□ -0.45
AMTP48728 TMX4-201ENST00000246024 6169 ntAPPRIS P1 TSL 1 (best) BASIC12.25□□□□□ -0.45
AMTP48728 LYSMD4-204ENST00000409796 2672 ntAPPRIS P1 TSL 1 (best) BASIC12.25□□□□□ -0.45
Retrieved 100 of 98,524 protein–RNA pairs in 40.6 ms