Protein–RNA interactions for Protein: P42574

CASP3, Caspase-3, humanhuman

Predictions only

Length 277 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CASP3P42574 AC079140.1-201ENST00000508039 487 ntBASIC15.19■□□□□ 0.02
CASP3P42574 PXN-AS1-202ENST00000538804 508 ntTSL 4 BASIC15.19■□□□□ 0.02
CASP3P42574 AC069503.2-201ENST00000546333 576 ntAPPRIS P1 TSL 5 BASIC15.19■□□□□ 0.02
CASP3P42574 AC022145.2-201ENST00000598203 171 ntBASIC15.19■□□□□ 0.02
CASP3P42574 SBK3-202ENST00000612221 1270 ntAPPRIS P1 TSL 5 BASIC15.19■□□□□ 0.02
CASP3P42574 LINC00623-204ENST00000617702 746 ntTSL 5 BASIC15.19■□□□□ 0.02
CASP3P42574 CEP72-201ENST00000264935 2434 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
CASP3P42574 CHN1-205ENST00000409900 2447 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
CASP3P42574 TMPRSS4-201ENST00000437212 2074 ntAPPRIS P3 TSL 1 (best) BASIC15.19■□□□□ 0.02
CASP3P42574 PKM-216ENST00000565184 2503 ntAPPRIS ALT1 TSL 1 (best) BASIC15.19■□□□□ 0.02
CASP3P42574 DACH1-203ENST00000619232 2986 ntAPPRIS ALT2 TSL 5 BASIC15.19■□□□□ 0.02
CASP3P42574 SDR16C5-201ENST00000303749 1840 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
CASP3P42574 CPEB2-201ENST00000259997 5612 ntAPPRIS ALT2 TSL 5 BASIC15.19■□□□□ 0.02
CASP3P42574 F2RL1-201ENST00000296677 2914 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
CASP3P42574 HOXA10-202ENST00000396344 1570 ntAPPRIS ALT1 TSL 1 (best) BASIC15.19■□□□□ 0.02
CASP3P42574 PDXP-202ENST00000403251 1571 ntTSL 2 BASIC15.19■□□□□ 0.02
CASP3P42574 MYADML2-201ENST00000409745 2452 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
CASP3P42574 NPAS2-201ENST00000335681 4007 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
CASP3P42574 TAB1-202ENST00000331454 1660 ntTSL 1 (best) BASIC15.19■□□□□ 0.02
CASP3P42574 C12orf40-202ENST00000405531 1656 ntAPPRIS ALT2 TSL 1 (best) BASIC15.19■□□□□ 0.02
CASP3P42574 ANTXRL-205ENST00000620264 2206 ntAPPRIS P2 TSL 5 BASIC15.19■□□□□ 0.02
CASP3P42574 PXN-201ENST00000228307 3785 ntAPPRIS P4 TSL 1 (best) BASIC15.19■□□□□ 0.02
CASP3P42574 TRIP6-209ENST00000619988 1303 ntTSL 1 (best) BASIC15.18■□□□□ 0.02
CASP3P42574 DHODH-201ENST00000219240 2426 ntAPPRIS P2 TSL 1 (best) BASIC15.18■□□□□ 0.02
CASP3P42574 AC104581.4-201ENST00000623126 3052 ntBASIC15.18■□□□□ 0.02
CASP3P42574 LIMS2-205ENST00000409455 2500 ntAPPRIS ALT1 TSL 1 (best) BASIC15.18■□□□□ 0.02
CASP3P42574 PGBD5-201ENST00000391860 10961 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
CASP3P42574 ARMC5-203ENST00000457010 4844 ntAPPRIS P3 TSL 1 (best) BASIC15.18■□□□□ 0.02
CASP3P42574 MVK-207ENST00000539575 2747 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
CASP3P42574 CCDC28A-202ENST00000611852 1505 ntTSL 1 (best) BASIC15.18■□□□□ 0.02
CASP3P42574 PPP1CB-202ENST00000358506 4771 ntAPPRIS P1 TSL 5 BASIC15.18■□□□□ 0.02
CASP3P42574 LFNG-205ENST00000402506 2268 ntTSL 2 BASIC15.18■□□□□ 0.02
CASP3P42574 FAM49B-202ENST00000517654 1817 ntAPPRIS P1 TSL 5 BASIC15.18■□□□□ 0.02
CASP3P42574 GPS1-226ENST00000623691 1839 ntAPPRIS ALT1 TSL 5 BASIC15.18■□□□□ 0.02
CASP3P42574 TMEM132D-202ENST00000422113 5776 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
CASP3P42574 TMC7-201ENST00000304381 3640 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
CASP3P42574 CRLF2-202ENST00000381567 1013 ntTSL 1 (best) BASIC15.18■□□□□ 0.02
CASP3P42574 CXCL1-201ENST00000395761 1097 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
CASP3P42574 MEIS1-AS2-201ENST00000439433 690 ntTSL 2 BASIC15.18■□□□□ 0.02
CASP3P42574 AL022341.1-201ENST00000455294 389 ntTSL 2 BASIC15.18■□□□□ 0.02
CASP3P42574 KRT18P34-201ENST00000488218 1270 ntBASIC15.18■□□□□ 0.02
CASP3P42574 AC025183.1-201ENST00000506335 425 ntTSL 4 BASIC15.18■□□□□ 0.02
CASP3P42574 PALLD-215ENST00000512127 2958 ntTSL 2 BASIC15.18■□□□□ 0.02
CASP3P42574 AZIN1-AS1-212ENST00000520538 476 ntTSL 3 BASIC15.18■□□□□ 0.02
CASP3P42574 FAM118B-206ENST00000529731 1028 ntTSL 5 BASIC15.18■□□□□ 0.02
CASP3P42574 AP000275.2-202ENST00000553001 929 ntTSL 5 BASIC15.18■□□□□ 0.02
CASP3P42574 AC090515.4-201ENST00000558042 450 ntTSL 3 BASIC15.18■□□□□ 0.02
CASP3P42574 LINC00668-203ENST00000579012 605 ntTSL 3 BASIC15.18■□□□□ 0.02
CASP3P42574 AC004835.2-201ENST00000603762 682 ntBASIC15.18■□□□□ 0.02
CASP3P42574 AC243773.2-203ENST00000612281 640 ntTSL 3 BASIC15.18■□□□□ 0.02
CASP3P42574 RAB9A-203ENST00000618931 737 ntAPPRIS P1 TSL 2 BASIC15.18■□□□□ 0.02
CASP3P42574 LRRC14-205ENST00000529022 2243 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
CASP3P42574 PLPPR5-201ENST00000263177 3288 ntAPPRIS P4 TSL 1 (best) BASIC15.18■□□□□ 0.02
CASP3P42574 ABLIM2-202ENST00000361581 2472 ntAPPRIS ALT2 TSL 1 (best) BASIC15.18■□□□□ 0.02
CASP3P42574 ARHGAP9-201ENST00000393791 2597 ntAPPRIS P3 TSL 1 (best) BASIC15.18■□□□□ 0.02
CASP3P42574 ACIN1-205ENST00000457657 4815 ntAPPRIS ALT2 TSL 5 BASIC15.18■□□□□ 0.02
CASP3P42574 PKN1-202ENST00000342216 2960 ntTSL 2 BASIC15.18■□□□□ 0.02
CASP3P42574 OPCML-202ENST00000374778 1302 ntTSL 1 (best) BASIC15.17■□□□□ 0.02
CASP3P42574 BEND4-203ENST00000611697 1348 ntTSL 2 BASIC15.17■□□□□ 0.02
CASP3P42574 BSG-215ENST00000618006 1329 ntTSL 2 BASIC15.17■□□□□ 0.02
CASP3P42574 SLC6A11-201ENST00000254488 4296 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
CASP3P42574 SDCBP2-202ENST00000360779 1519 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
CASP3P42574 AL512625.3-203ENST00000445604 1602 ntTSL 5 BASIC15.17■□□□□ 0.02
CASP3P42574 RCOR3-204ENST00000452621 1827 ntTSL 2 BASIC15.17■□□□□ 0.02
CASP3P42574 HPCAL1-207ENST00000620771 1941 ntAPPRIS P1 TSL 2 BASIC15.17■□□□□ 0.02
CASP3P42574 GCK-202ENST00000345378 2421 ntTSL 2 BASIC15.17■□□□□ 0.02
CASP3P42574 LYPLA1-214ENST00000618741 2526 ntTSL 5 BASIC15.17■□□□□ 0.02
CASP3P42574 KANK1-204ENST00000382293 5249 ntTSL 1 (best) BASIC15.17■□□□□ 0.02
CASP3P42574 TBK1-201ENST00000331710 3256 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
CASP3P42574 TRA2B-205ENST00000453386 2952 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
CASP3P42574 PDE8B-204ENST00000342343 2677 ntAPPRIS ALT2 TSL 1 (best) BASIC15.17■□□□□ 0.02
CASP3P42574 TPD52L2-201ENST00000217121 2362 ntTSL 2 BASIC15.17■□□□□ 0.02
CASP3P42574 LITAF-201ENST00000339430 2356 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
CASP3P42574 CHAT-203ENST00000351556 2286 ntAPPRIS ALT2 TSL 5 BASIC15.17■□□□□ 0.02
CASP3P42574 GOLGA8DP-202ENST00000341390 2184 ntBASIC15.17■□□□□ 0.02
CASP3P42574 PRPS1-204ENST00000372435 2073 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
CASP3P42574 AL031731.1-201ENST00000642131 2094 ntBASIC15.17■□□□□ 0.02
CASP3P42574 C8orf49-201ENST00000525043 1968 ntBASIC15.17■□□□□ 0.02
CASP3P42574 PCGF1-201ENST00000233630 1792 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
CASP3P42574 SH2D2A-202ENST00000368199 1658 ntAPPRIS P3 TSL 1 (best) BASIC15.17■□□□□ 0.02
CASP3P42574 ROPN1L-201ENST00000274134 1066 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
CASP3P42574 DPM2-202ENST00000373110 738 ntTSL 2 BASIC15.17■□□□□ 0.02
CASP3P42574 HSD17B8-203ENST00000374662 990 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
CASP3P42574 ITGB2-204ENST00000397846 422 ntTSL 2 BASIC15.17■□□□□ 0.02
CASP3P42574 CYB5A-203ENST00000397914 619 ntTSL 3 BASIC15.17■□□□□ 0.02
CASP3P42574 CHMP3-203ENST00000409225 1099 ntTSL 2 BASIC15.17■□□□□ 0.02
CASP3P42574 URGCP-206ENST00000446958 365 ntTSL 2 BASIC15.17■□□□□ 0.02
CASP3P42574 SPINK2-203ENST00000506738 763 ntAPPRIS ALT2 TSL 2 BASIC15.17■□□□□ 0.02
CASP3P42574 AC019257.1-202ENST00000521498 445 ntTSL 5 BASIC15.17■□□□□ 0.02
CASP3P42574 RIMS4-202ENST00000541604 1036 ntAPPRIS ALT1 TSL 1 (best) BASIC15.17■□□□□ 0.02
CASP3P42574 CEMP1-201ENST00000565480 519 ntAPPRIS ALT2 TSL 3 BASIC15.17■□□□□ 0.02
CASP3P42574 AC130456.4-201ENST00000568635 665 ntTSL 2 BASIC15.17■□□□□ 0.02
CASP3P42574 METTL23-202ENST00000586200 465 ntTSL 1 (best) BASIC15.17■□□□□ 0.02
CASP3P42574 METTL23-203ENST00000586738 1059 ntTSL 5 BASIC15.17■□□□□ 0.02
CASP3P42574 METTL23-205ENST00000588302 925 ntTSL 5 BASIC15.17■□□□□ 0.02
CASP3P42574 AC005330.1-201ENST00000590086 1238 ntTSL 5 BASIC15.17■□□□□ 0.02
CASP3P42574 METTL23-212ENST00000590964 1006 ntTSL 1 (best) BASIC15.17■□□□□ 0.02
CASP3P42574 BRD3-201ENST00000303407 5652 ntAPPRIS P2 TSL 1 (best) BASIC15.17■□□□□ 0.02
CASP3P42574 TBC1D2-201ENST00000342112 3046 ntTSL 2 BASIC15.17■□□□□ 0.02
CASP3P42574 AHCY-201ENST00000217426 2143 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
Retrieved 100 of 98,524 protein–RNA pairs in 32.9 ms