Protein–RNA interactions for Protein: P40227

CCT6A, T-complex protein 1 subunit zeta, humanhuman

Known RBP Predictions only

Length 531 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCT6AP40227 RPL8-207ENST00000528957 1015 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
CCT6AP40227 AC131009.1-201ENST00000539078 426 ntTSL 5 BASIC18.31■□□□□ 0.52
CCT6AP40227 RIMS4-202ENST00000541604 1036 ntAPPRIS ALT1 TSL 1 (best) BASIC18.31■□□□□ 0.52
CCT6AP40227 AC069503.2-201ENST00000546333 576 ntAPPRIS P1 TSL 5 BASIC18.31■□□□□ 0.52
CCT6AP40227 CIRBP-204ENST00000585630 870 ntAPPRIS P3 TSL 3 BASIC18.31■□□□□ 0.52
CCT6AP40227 TMEM205-205ENST00000586590 677 ntAPPRIS P1 TSL 5 BASIC18.31■□□□□ 0.52
CCT6AP40227 TMEM205-207ENST00000586956 1003 ntAPPRIS P1 TSL 2 BASIC18.31■□□□□ 0.52
CCT6AP40227 ZSCAN18-208ENST00000595944 1768 ntTSL 2 BASIC18.31■□□□□ 0.52
CCT6AP40227 TSPAN5-201ENST00000305798 3365 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
CCT6AP40227 PRMT5-203ENST00000397440 1907 ntTSL 1 (best) BASIC18.31■□□□□ 0.52
CCT6AP40227 GRAMD2B-217ENST00000515200 3109 ntTSL 5 BASIC18.31■□□□□ 0.52
CCT6AP40227 NFE2-201ENST00000312156 1658 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
CCT6AP40227 RASSF1-205ENST00000395126 1657 ntTSL 1 (best) BASIC18.31■□□□□ 0.52
CCT6AP40227 TPGS2-220ENST00000610723 1426 ntTSL 3 BASIC18.31■□□□□ 0.52
CCT6AP40227 SYDE1-204ENST00000600440 3058 ntTSL 1 (best) BASIC18.31■□□□□ 0.52
CCT6AP40227 MCF2L2-208ENST00000473233 4748 ntAPPRIS ALT2 TSL 5 BASIC18.31■□□□□ 0.52
CCT6AP40227 GEM-202ENST00000396194 2103 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
CCT6AP40227 MIR155HG-201ENST00000456917 1600 ntTSL 5 BASIC18.31■□□□□ 0.52
CCT6AP40227 CTCF-201ENST00000264010 3939 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
CCT6AP40227 CD300LG-204ENST00000539718 1399 ntAPPRIS ALT2 TSL 1 (best) BASIC18.3■□□□□ 0.52
CCT6AP40227 TMEM53-203ENST00000372242 1846 ntTSL 3 BASIC18.3■□□□□ 0.52
CCT6AP40227 CDKN1A-203ENST00000405375 2267 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
CCT6AP40227 CASK-202ENST00000378158 3848 ntTSL 5 BASIC18.3■□□□□ 0.52
CCT6AP40227 HDAC5-201ENST00000225983 5326 ntAPPRIS P3 TSL 5 BASIC18.3■□□□□ 0.52
CCT6AP40227 REPIN1-202ENST00000425389 2876 ntAPPRIS P3 BASIC18.3■□□□□ 0.52
CCT6AP40227 GP5-201ENST00000401815 3534 ntAPPRIS P1 BASIC18.3■□□□□ 0.52
CCT6AP40227 FGF11-201ENST00000293829 3063 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
CCT6AP40227 CCDC155-201ENST00000447857 2378 ntAPPRIS P2 TSL 1 (best) BASIC18.3■□□□□ 0.52
CCT6AP40227 GAL3ST1-203ENST00000402321 1908 ntAPPRIS P1 TSL 2 BASIC18.3■□□□□ 0.52
CCT6AP40227 SHISA5-209ENST00000443308 1933 ntTSL 2 BASIC18.3■□□□□ 0.52
CCT6AP40227 HPCAL1-207ENST00000620771 1941 ntAPPRIS P1 TSL 2 BASIC18.3■□□□□ 0.52
CCT6AP40227 MBP-202ENST00000355994 2772 ntTSL 5 BASIC18.3■□□□□ 0.52
CCT6AP40227 ITLN1-201ENST00000326245 1183 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
CCT6AP40227 C11orf88-201ENST00000332814 795 ntAPPRIS P4 TSL 5 BASIC18.3■□□□□ 0.52
CCT6AP40227 SNURF-201ENST00000338327 331 ntAPPRIS P1 TSL 5 BASIC18.3■□□□□ 0.52
CCT6AP40227 AL109613.1-202ENST00000427243 639 ntTSL 1 (best) BASIC18.3■□□□□ 0.52
CCT6AP40227 FAM58DP-201ENST00000428076 619 ntBASIC18.3■□□□□ 0.52
CCT6AP40227 ITPA-203ENST00000455664 729 ntTSL 1 (best) BASIC18.3■□□□□ 0.52
CCT6AP40227 VASH2-211ENST00000517399 1068 ntAPPRIS ALT1 TSL 1 (best) BASIC18.3■□□□□ 0.52
CCT6AP40227 SALL3-206ENST00000616649 2958 ntTSL 5 BASIC18.3■□□□□ 0.52
CCT6AP40227 AC139530.3-201ENST00000620344 690 ntBASIC18.3■□□□□ 0.52
CCT6AP40227 AC084121.4-201ENST00000641598 221 ntBASIC18.3■□□□□ 0.52
CCT6AP40227 AF228730.8-201ENST00000642140 221 ntBASIC18.3■□□□□ 0.52
CCT6AP40227 SPCS2-201ENST00000263672 2708 ntAPPRIS P2 TSL 1 (best) BASIC18.3■□□□□ 0.52
CCT6AP40227 SAE1-202ENST00000392776 1851 ntTSL 3 BASIC18.3■□□□□ 0.52
CCT6AP40227 KCNT1-214ENST00000631073 3948 ntAPPRIS ALT2 TSL 5 BASIC18.3■□□□□ 0.52
CCT6AP40227 PPP1R26-205ENST00000605286 4744 ntAPPRIS P1 TSL 3 BASIC18.3■□□□□ 0.52
CCT6AP40227 SOCS2-212ENST00000622746 2881 ntAPPRIS P1 TSL 3 BASIC18.3■□□□□ 0.52
CCT6AP40227 SH2B1-201ENST00000322610 3095 ntTSL 2 BASIC18.3■□□□□ 0.52
CCT6AP40227 MBD1-204ENST00000347968 3091 ntTSL 1 (best) BASIC18.3■□□□□ 0.52
CCT6AP40227 NBPF11-205ENST00000615281 5494 ntAPPRIS P2 TSL 1 (best) BASIC18.3■□□□□ 0.52
CCT6AP40227 TMEM198B-203ENST00000482378 2230 ntTSL 1 (best) BASIC18.3■□□□□ 0.52
CCT6AP40227 NUDT16P1-202ENST00000499077 2208 ntTSL 2 BASIC18.3■□□□□ 0.52
CCT6AP40227 KIF13B-206ENST00000524189 8745 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
CCT6AP40227 NETO2-202ENST00000562435 7481 ntAPPRIS P3 TSL 1 (best) BASIC18.29■□□□□ 0.52
CCT6AP40227 TOMM40-207ENST00000592434 3415 ntAPPRIS ALT2 TSL 2 BASIC18.29■□□□□ 0.52
CCT6AP40227 SIT1-204ENST00000618781 1317 ntAPPRIS ALT2 TSL 5 BASIC18.29■□□□□ 0.52
CCT6AP40227 C16orf89-201ENST00000315997 1872 ntAPPRIS P3 TSL 1 (best) BASIC18.29■□□□□ 0.52
CCT6AP40227 WBP2-204ENST00000585462 1895 ntTSL 3 BASIC18.29■□□□□ 0.52
CCT6AP40227 CDC14A-202ENST00000361544 2417 ntAPPRIS P4 TSL 1 (best) BASIC18.29■□□□□ 0.52
CCT6AP40227 DGAT1-206ENST00000528718 3711 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
CCT6AP40227 LDB3-208ENST00000623007 1664 ntTSL 1 (best) BASIC18.29■□□□□ 0.52
CCT6AP40227 SLC29A1-205ENST00000371740 2219 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
CCT6AP40227 KIAA0319L-201ENST00000325722 4789 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
CCT6AP40227 UCKL1-201ENST00000354216 1837 ntTSL 1 (best) BASIC18.29■□□□□ 0.52
CCT6AP40227 LINC00404-201ENST00000418660 428 ntTSL 2 BASIC18.29■□□□□ 0.52
CCT6AP40227 AL137003.1-201ENST00000423260 491 ntTSL 5 BASIC18.29■□□□□ 0.52
CCT6AP40227 AP001058.1-201ENST00000423967 463 ntTSL 2 BASIC18.29■□□□□ 0.52
CCT6AP40227 NDUFB2-202ENST00000460088 420 ntTSL 3 BASIC18.29■□□□□ 0.52
CCT6AP40227 KIAA0930-215ENST00000496226 589 ntTSL 5 BASIC18.29■□□□□ 0.52
CCT6AP40227 TVP23B-206ENST00000574226 1080 ntAPPRIS ALT1 TSL 1 (best) BASIC18.29■□□□□ 0.52
CCT6AP40227 LINC00668-203ENST00000579012 605 ntTSL 3 BASIC18.29■□□□□ 0.52
CCT6AP40227 BORCS8-206ENST00000585679 801 ntTSL 3 BASIC18.29■□□□□ 0.52
CCT6AP40227 KF456478.1-201ENST00000585980 472 ntTSL 3 BASIC18.29■□□□□ 0.52
CCT6AP40227 AL365330.1-201ENST00000607459 531 ntBASIC18.29■□□□□ 0.52
CCT6AP40227 PDCD6-214ENST00000628729 1073 ntTSL 5 BASIC18.29■□□□□ 0.52
CCT6AP40227 LCK-201ENST00000333070 2166 ntTSL 1 (best) BASIC18.29■□□□□ 0.52
CCT6AP40227 SYNM-201ENST00000328642 3960 ntAPPRIS ALT2 TSL 1 (best) BASIC18.29■□□□□ 0.52
CCT6AP40227 MED19-201ENST00000337672 1637 ntTSL 1 (best) BASIC18.29■□□□□ 0.52
CCT6AP40227 DMAC2-210ENST00000592922 1622 ntTSL 2 BASIC18.29■□□□□ 0.52
CCT6AP40227 CDK11B-204ENST00000407249 2677 ntTSL 1 (best) BASIC18.29■□□□□ 0.52
CCT6AP40227 AL603832.2-201ENST00000566195 2125 ntBASIC18.29■□□□□ 0.52
CCT6AP40227 AP4B1-204ENST00000369569 2818 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
CCT6AP40227 TSPY26P-202ENST00000565928 3884 ntBASIC18.29■□□□□ 0.52
CCT6AP40227 EIF4G3-205ENST00000400422 5762 ntAPPRIS ALT2 TSL 1 (best) BASIC18.29■□□□□ 0.52
CCT6AP40227 SBSN-201ENST00000452271 1945 ntAPPRIS ALT2 TSL 1 (best) BASIC18.29■□□□□ 0.52
CCT6AP40227 PRSS50-201ENST00000460241 2960 ntAPPRIS P1 TSL 2 BASIC18.29■□□□□ 0.52
CCT6AP40227 SLC9A7P1-201ENST00000554295 3311 ntBASIC18.29■□□□□ 0.52
CCT6AP40227 SLC17A9-201ENST00000370349 2594 ntAPPRIS ALT2 TSL 1 (best) BASIC18.29■□□□□ 0.52
CCT6AP40227 EPB41L3-203ENST00000400111 4259 ntTSL 5 BASIC18.29■□□□□ 0.52
CCT6AP40227 TMEM132D-202ENST00000422113 5776 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
CCT6AP40227 CCDC8-201ENST00000307522 3213 ntAPPRIS P1 BASIC18.28■□□□□ 0.52
CCT6AP40227 RIMS1-210ENST00000491071 5047 ntTSL 5 BASIC18.28■□□□□ 0.52
CCT6AP40227 RTL6-201ENST00000341255 5495 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
CCT6AP40227 ACSL6-201ENST00000296869 2561 ntTSL 5 BASIC18.28■□□□□ 0.52
CCT6AP40227 ZNF764-201ENST00000252797 2738 ntAPPRIS P3 TSL 1 (best) BASIC18.28■□□□□ 0.52
CCT6AP40227 POLR2A-201ENST00000572844 2083 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
CCT6AP40227 ROPN1L-201ENST00000274134 1066 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
CCT6AP40227 RNA5SP410-201ENST00000516285 106 ntBASIC18.28■□□□□ 0.52
CCT6AP40227 AC103736.1-203ENST00000524565 872 ntTSL 3 BASIC18.28■□□□□ 0.52
Retrieved 100 of 98,524 protein–RNA pairs in 27.9 ms