Protein–RNA interactions for Protein: P26640

VARS, Valine--tRNA ligase, humanhuman

Known RBP Predictions only

Length 1,264 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VARSP26640 PIK3R6-203ENST00000614407 2265 ntAPPRIS P1 TSL 1 (best) BASIC15.97■□□□□ 0.15
VARSP26640 MAP4K1-208ENST00000589130 2654 ntTSL 5 BASIC15.97■□□□□ 0.15
VARSP26640 HSPB7-204ENST00000411503 2128 ntAPPRIS ALT1 TSL 1 (best) BASIC15.97■□□□□ 0.15
VARSP26640 AC073324.2-201ENST00000626532 2941 ntTSL 4 BASIC15.97■□□□□ 0.15
VARSP26640 ADORA1-203ENST00000367235 2219 ntTSL 2 BASIC15.97■□□□□ 0.15
VARSP26640 C22orf39-201ENST00000333059 1221 ntAPPRIS P1 TSL 1 (best) BASIC15.97■□□□□ 0.15
VARSP26640 DPM2-202ENST00000373110 738 ntTSL 2 BASIC15.97■□□□□ 0.15
VARSP26640 HCCS-203ENST00000380763 1000 ntAPPRIS P1 TSL 1 (best) BASIC15.97■□□□□ 0.15
VARSP26640 SYS1-203ENST00000414310 795 ntTSL 3 BASIC15.97■□□□□ 0.15
VARSP26640 MIPEPP3-202ENST00000424756 347 ntTSL 3 BASIC15.97■□□□□ 0.15
VARSP26640 TM4SF19-204ENST00000454715 1061 ntTSL 1 (best) BASIC15.97■□□□□ 0.15
VARSP26640 NMU-203ENST00000507338 658 ntTSL 3 BASIC15.97■□□□□ 0.15
VARSP26640 SMN2-210ENST00000511812 867 ntTSL 2 BASIC15.97■□□□□ 0.15
VARSP26640 LINC01413-201ENST00000564843 772 ntTSL 3 BASIC15.97■□□□□ 0.15
VARSP26640 ERCC1-212ENST00000591636 836 ntTSL 2 BASIC15.97■□□□□ 0.15
VARSP26640 PGLYRP1-201ENST00000008938 720 ntAPPRIS P1 TSL 1 (best) BASIC15.97■□□□□ 0.15
VARSP26640 ASB7-202ENST00000343276 1694 ntTSL 1 (best) BASIC15.97■□□□□ 0.15
VARSP26640 LONRF3-203ENST00000422289 2898 ntTSL 2 BASIC15.97■□□□□ 0.15
VARSP26640 EPN2-201ENST00000314728 4871 ntAPPRIS P4 TSL 1 (best) BASIC15.97■□□□□ 0.15
VARSP26640 CADPS2-204ENST00000412584 4308 ntAPPRIS P2 TSL 1 (best) BASIC15.97■□□□□ 0.15
VARSP26640 HPCAL1-207ENST00000620771 1941 ntAPPRIS P1 TSL 2 BASIC15.97■□□□□ 0.15
VARSP26640 SLC25A35-205ENST00000580340 1541 ntTSL 1 (best) BASIC15.97■□□□□ 0.15
VARSP26640 WDR45-234ENST00000634838 1545 ntTSL 5 BASIC15.97■□□□□ 0.15
VARSP26640 DMTN-201ENST00000265800 2554 ntTSL 5 BASIC15.97■□□□□ 0.15
VARSP26640 DMTN-207ENST00000517305 2551 ntTSL 5 BASIC15.97■□□□□ 0.15
VARSP26640 PPP6R1-201ENST00000412770 3961 ntAPPRIS P1 TSL 1 (best) BASIC15.97■□□□□ 0.15
VARSP26640 C1orf43-201ENST00000350592 1610 ntTSL 1 (best) BASIC15.97■□□□□ 0.15
VARSP26640 AC008969.1-201ENST00000550135 6438 ntTSL 2 BASIC15.97■□□□□ 0.15
VARSP26640 SP100-204ENST00000409341 1898 ntTSL 1 (best) BASIC15.97■□□□□ 0.15
VARSP26640 LITAF-201ENST00000339430 2356 ntAPPRIS P1 TSL 1 (best) BASIC15.97■□□□□ 0.15
VARSP26640 WDR74-205ENST00000525752 1724 ntTSL 5 BASIC15.97■□□□□ 0.15
VARSP26640 WDTC1-202ENST00000361771 4275 ntAPPRIS P3 TSL 1 (best) BASIC15.97■□□□□ 0.15
VARSP26640 ADGRA1-202ENST00000392607 4283 ntAPPRIS P2 TSL 5 BASIC15.97■□□□□ 0.15
VARSP26640 FADS2-202ENST00000278840 3630 ntAPPRIS P1 TSL 1 (best) BASIC15.96■□□□□ 0.15
VARSP26640 C14orf93-202ENST00000341470 2221 ntTSL 1 (best) BASIC15.96■□□□□ 0.15
VARSP26640 POLR2A-201ENST00000572844 2083 ntAPPRIS P1 TSL 1 (best) BASIC15.96■□□□□ 0.15
VARSP26640 ANKRD23-201ENST00000318357 2597 ntAPPRIS P1 TSL 1 (best) BASIC15.96■□□□□ 0.15
VARSP26640 NSMF-205ENST00000371474 3571 ntAPPRIS ALT1 TSL 1 (best) BASIC15.96■□□□□ 0.15
VARSP26640 NSMF-208ENST00000437259 3577 ntAPPRIS ALT1 TSL 5 BASIC15.96■□□□□ 0.15
VARSP26640 STK24-203ENST00000397517 4578 ntTSL 2 BASIC15.96■□□□□ 0.15
VARSP26640 AHDC1-202ENST00000374011 6438 ntAPPRIS P1 TSL 5 BASIC15.96■□□□□ 0.15
VARSP26640 AP000787.1-201ENST00000501356 1926 ntTSL 2 BASIC15.96■□□□□ 0.15
VARSP26640 NDRG1-202ENST00000414097 3755 ntAPPRIS P1 TSL 2 BASIC15.96■□□□□ 0.15
VARSP26640 CDK18-201ENST00000360066 3141 ntAPPRIS P1 TSL 1 (best) BASIC15.96■□□□□ 0.15
VARSP26640 PRKN-202ENST00000366892 1505 ntTSL 5 BASIC15.96■□□□□ 0.15
VARSP26640 TUSC3-204ENST00000506802 1546 ntTSL 5 BASIC15.96■□□□□ 0.15
VARSP26640 LRRC57-202ENST00000397130 2384 ntAPPRIS P1 TSL 1 (best) BASIC15.96■□□□□ 0.15
VARSP26640 BLOC1S2-202ENST00000370372 1249 ntAPPRIS P1 TSL 1 (best) BASIC15.96■□□□□ 0.15
VARSP26640 GEM-202ENST00000396194 2103 ntAPPRIS P1 TSL 1 (best) BASIC15.96■□□□□ 0.15
VARSP26640 MECP2-203ENST00000407218 1174 ntTSL 5 BASIC15.96■□□□□ 0.15
VARSP26640 FAM8A3P-201ENST00000427218 844 ntBASIC15.96■□□□□ 0.15
VARSP26640 AP000695.1-201ENST00000429588 893 ntTSL 3 BASIC15.96■□□□□ 0.15
VARSP26640 HELT-204ENST00000515777 841 ntAPPRIS P4 TSL 1 (best) BASIC15.96■□□□□ 0.15
VARSP26640 UBE2V2-201ENST00000517630 612 ntTSL 4 BASIC15.96■□□□□ 0.15
VARSP26640 LEPROTL1-203ENST00000518001 589 ntTSL 4 BASIC15.96■□□□□ 0.15
VARSP26640 THTPA-204ENST00000554970 569 ntTSL 4 BASIC15.96■□□□□ 0.15
VARSP26640 THTPA-206ENST00000556015 535 ntTSL 3 BASIC15.96■□□□□ 0.15
VARSP26640 PDPK2P-202ENST00000562415 1191 ntBASIC15.96■□□□□ 0.15
VARSP26640 FOSB-211ENST00000592436 1057 ntTSL 5 BASIC15.96■□□□□ 0.15
VARSP26640 AL009183.1-201ENST00000603760 355 ntBASIC15.96■□□□□ 0.15
VARSP26640 AL590999.1-203ENST00000606829 542 ntTSL 4 BASIC15.96■□□□□ 0.15
VARSP26640 AC021097.1-201ENST00000607902 574 ntBASIC15.96■□□□□ 0.15
VARSP26640 AL157832.3-201ENST00000635764 1005 ntTSL 5 BASIC15.96■□□□□ 0.15
VARSP26640 NDOR1-202ENST00000371521 2497 ntTSL 1 (best) BASIC15.96■□□□□ 0.15
VARSP26640 PTBP1-202ENST00000350092 3069 ntAPPRIS ALT1 TSL 1 (best) BASIC15.96■□□□□ 0.15
VARSP26640 PDZD4-202ENST00000393758 3763 ntAPPRIS ALT2 TSL 1 (best) BASIC15.96■□□□□ 0.15
VARSP26640 NRG1-202ENST00000356819 5931 ntAPPRIS ALT2 TSL 1 (best) BASIC15.96■□□□□ 0.15
VARSP26640 CPVL-202ENST00000396276 1739 ntAPPRIS P1 TSL 1 (best) BASIC15.96■□□□□ 0.15
VARSP26640 CLPTM1L-209ENST00000507807 1740 ntTSL 1 (best) BASIC15.96■□□□□ 0.15
VARSP26640 WDR45-239ENST00000634944 1745 ntAPPRIS P1 TSL 5 BASIC15.96■□□□□ 0.15
VARSP26640 SGK1-205ENST00000413996 2686 ntTSL 1 (best) BASIC15.96■□□□□ 0.15
VARSP26640 TLE3-223ENST00000560939 3021 ntTSL 5 BASIC15.96■□□□□ 0.15
VARSP26640 CSAD-202ENST00000379843 2086 ntTSL 5 BASIC15.96■□□□□ 0.15
VARSP26640 EPS8-201ENST00000281172 4061 ntAPPRIS P1 TSL 1 (best) BASIC15.96■□□□□ 0.15
VARSP26640 AL121845.3-201ENST00000490623 3119 ntTSL 5 BASIC15.96■□□□□ 0.14
VARSP26640 GUCD1-204ENST00000407471 3482 ntAPPRIS P3 TSL 5 BASIC15.96■□□□□ 0.14
VARSP26640 FBXL12-206ENST00000588922 1843 ntTSL 2 BASIC15.96■□□□□ 0.14
VARSP26640 IQCE-210ENST00000438376 2170 ntAPPRIS ALT2 TSL 5 BASIC15.96■□□□□ 0.14
VARSP26640 PEPD-201ENST00000244137 1910 ntAPPRIS P1 TSL 1 (best) BASIC15.96■□□□□ 0.14
VARSP26640 FMO5-201ENST00000254090 2632 ntAPPRIS P1 TSL 1 (best) BASIC15.96■□□□□ 0.14
VARSP26640 LHCGR-203ENST00000403273 1921 ntTSL 5 BASIC15.96■□□□□ 0.14
VARSP26640 PPP2R5D-206ENST00000472118 2963 ntAPPRIS ALT2 TSL 5 BASIC15.96■□□□□ 0.14
VARSP26640 CCDC116-203ENST00000607942 1913 ntAPPRIS ALT2 TSL 2 BASIC15.96■□□□□ 0.14
VARSP26640 FAM227B-201ENST00000299338 2008 ntAPPRIS P3 TSL 2 BASIC15.95■□□□□ 0.14
VARSP26640 ASCL1-201ENST00000266744 2472 ntAPPRIS P1 TSL 1 (best) BASIC15.95■□□□□ 0.14
VARSP26640 KCNQ2-204ENST00000359125 3253 ntAPPRIS P4 TSL 1 (best) BASIC15.95■□□□□ 0.14
VARSP26640 HECTD1-201ENST00000399332 9134 ntAPPRIS P1 TSL 5 BASIC15.95■□□□□ 0.14
VARSP26640 CETN1-201ENST00000327228 1758 ntAPPRIS P1 BASIC15.95■□□□□ 0.14
VARSP26640 SREBF1-201ENST00000261646 4178 ntAPPRIS P3 TSL 1 (best) BASIC15.95■□□□□ 0.14
VARSP26640 SPSB1-202ENST00000357898 1439 ntAPPRIS P1 TSL 5 BASIC15.95■□□□□ 0.14
VARSP26640 GHDC-201ENST00000301671 2650 ntAPPRIS P1 TSL 2 BASIC15.95■□□□□ 0.14
VARSP26640 TXNDC2-201ENST00000306084 1873 ntAPPRIS ALT2 TSL 1 (best) BASIC15.95■□□□□ 0.14
VARSP26640 CUX1-213ENST00000549414 4452 ntAPPRIS ALT2 TSL 5 BASIC15.95■□□□□ 0.14
VARSP26640 TMEM101-201ENST00000206380 1536 ntAPPRIS P1 TSL 1 (best) BASIC15.95■□□□□ 0.14
VARSP26640 PPP3CB-201ENST00000342558 2418 ntTSL 5 BASIC15.95■□□□□ 0.14
VARSP26640 RFPL2-203ENST00000400237 2407 ntAPPRIS P3 TSL 2 BASIC15.95■□□□□ 0.14
VARSP26640 SURF4-207ENST00000545297 2863 ntTSL 2 BASIC15.95■□□□□ 0.14
VARSP26640 NBPF15-202ENST00000488031 4535 ntAPPRIS P1 TSL 5 BASIC15.95■□□□□ 0.14
VARSP26640 SDCBP-201ENST00000260130 2167 ntAPPRIS P3 TSL 1 (best) BASIC15.95■□□□□ 0.14
VARSP26640 SIGLEC10-201ENST00000339313 2256 ntAPPRIS P3 TSL 1 (best) BASIC15.95■□□□□ 0.14
Retrieved 100 of 98,524 protein–RNA pairs in 43.2 ms