Protein–RNA interactions for Protein: P17787

CHRNB2, Neuronal acetylcholine receptor subunit beta-2, humanhuman

Predictions only

Length 502 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CHRNB2P17787 C17orf49-203ENST00000546760 764 ntTSL 5 BASIC17.1■□□□□ 0.33
CHRNB2P17787 PTBP1-202ENST00000350092 3069 ntAPPRIS ALT1 TSL 1 (best) BASIC17.1■□□□□ 0.33
CHRNB2P17787 OPCML-202ENST00000374778 1302 ntTSL 1 (best) BASIC17.1■□□□□ 0.33
CHRNB2P17787 PAX3-206ENST00000392070 2258 ntAPPRIS P4 TSL 1 (best) BASIC17.1■□□□□ 0.33
CHRNB2P17787 SPSB1-202ENST00000357898 1439 ntAPPRIS P1 TSL 5 BASIC17.1■□□□□ 0.33
CHRNB2P17787 CHID1-215ENST00000528581 1431 ntTSL 2 BASIC17.1■□□□□ 0.33
CHRNB2P17787 PTOV1-219ENST00000601638 1413 ntTSL 5 BASIC17.1■□□□□ 0.33
CHRNB2P17787 YTHDF3-212ENST00000621413 2370 ntTSL 5 BASIC17.1■□□□□ 0.33
CHRNB2P17787 GPSM3-206ENST00000375040 1476 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
CHRNB2P17787 PROZ-202ENST00000375547 1488 ntAPPRIS P3 TSL 1 (best) BASIC17.1■□□□□ 0.33
CHRNB2P17787 RBCK1-201ENST00000353660 2511 ntTSL 1 (best) BASIC17.1■□□□□ 0.33
CHRNB2P17787 FHL2-205ENST00000393353 1531 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
CHRNB2P17787 ZBTB45P2-201ENST00000452245 1531 ntBASIC17.1■□□□□ 0.33
CHRNB2P17787 AC073347.1-201ENST00000421633 2643 ntBASIC17.1■□□□□ 0.33
CHRNB2P17787 UBE2D1-204ENST00000615793 2621 ntTSL 2 BASIC17.1■□□□□ 0.33
CHRNB2P17787 FAM192A-201ENST00000309137 2848 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
CHRNB2P17787 HMBOX1-212ENST00000558662 1765 ntTSL 5 BASIC17.1■□□□□ 0.33
CHRNB2P17787 SMARCA4-203ENST00000429416 5691 ntTSL 2 BASIC17.1■□□□□ 0.33
CHRNB2P17787 PBX1-219ENST00000560641 3225 ntTSL 5 BASIC17.09■□□□□ 0.33
CHRNB2P17787 CDK13-201ENST00000181839 7298 ntAPPRIS P4 TSL 1 (best) BASIC17.09■□□□□ 0.33
CHRNB2P17787 NUP153-202ENST00000537253 6030 ntAPPRIS ALT2 TSL 2 BASIC17.09■□□□□ 0.33
CHRNB2P17787 PPP1CB-202ENST00000358506 4771 ntAPPRIS P1 TSL 5 BASIC17.09■□□□□ 0.33
CHRNB2P17787 PDE1B-201ENST00000243052 3444 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
CHRNB2P17787 LCK-206ENST00000373564 2137 ntTSL 5 BASIC17.09■□□□□ 0.33
CHRNB2P17787 TCF25-201ENST00000263346 2233 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
CHRNB2P17787 SLC3A2-204ENST00000377891 2222 ntTSL 2 BASIC17.09■□□□□ 0.33
CHRNB2P17787 PPT1-215ENST00000641471 2368 ntBASIC17.09■□□□□ 0.33
CHRNB2P17787 SPATA20-202ENST00000356488 2634 ntTSL 1 (best) BASIC17.09■□□□□ 0.33
CHRNB2P17787 AC009242.1-201ENST00000634300 2706 ntTSL 5 BASIC17.09■□□□□ 0.33
CHRNB2P17787 KIAA1586-201ENST00000370733 2933 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
CHRNB2P17787 GCLC-213ENST00000616923 3694 ntTSL 1 (best) BASIC17.09■□□□□ 0.33
CHRNB2P17787 PFN4-201ENST00000313213 974 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
CHRNB2P17787 STOM-202ENST00000347359 870 ntTSL 2 BASIC17.09■□□□□ 0.33
CHRNB2P17787 JMJD7-203ENST00000408047 1192 ntTSL 5 BASIC17.09■□□□□ 0.33
CHRNB2P17787 PABPN1L-201ENST00000411789 873 ntTSL 1 (best) BASIC17.09■□□□□ 0.33
CHRNB2P17787 NKIRAS1-204ENST00000416026 795 ntAPPRIS P2 TSL 3 BASIC17.09■□□□□ 0.33
CHRNB2P17787 COX10-202ENST00000429152 875 ntTSL 2 BASIC17.09■□□□□ 0.33
CHRNB2P17787 AC112482.1-201ENST00000492080 688 ntBASIC17.09■□□□□ 0.33
CHRNB2P17787 SPINK2-203ENST00000506738 763 ntAPPRIS ALT2 TSL 2 BASIC17.09■□□□□ 0.33
CHRNB2P17787 RPL8-207ENST00000528957 1015 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
CHRNB2P17787 AC243562.2-201ENST00000561247 970 ntBASIC17.09■□□□□ 0.33
CHRNB2P17787 LINC01413-201ENST00000564843 772 ntTSL 3 BASIC17.09■□□□□ 0.33
CHRNB2P17787 AC129926.1-201ENST00000581944 614 ntTSL 2 BASIC17.09■□□□□ 0.33
CHRNB2P17787 MIR4469-201ENST00000583919 79 ntBASIC17.09■□□□□ 0.33
CHRNB2P17787 AC099811.2-203ENST00000592574 958 ntAPPRIS P1 TSL 5 BASIC17.09■□□□□ 0.33
CHRNB2P17787 AL513210.1-201ENST00000629608 234 ntBASIC17.09■□□□□ 0.33
CHRNB2P17787 TEAD3-204ENST00000639578 1308 ntAPPRIS P2 TSL 1 (best) BASIC17.09■□□□□ 0.33
CHRNB2P17787 CASK-203ENST00000378163 4411 ntAPPRIS ALT1 TSL 5 BASIC17.09■□□□□ 0.33
CHRNB2P17787 KRT27-201ENST00000301656 1612 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
CHRNB2P17787 AC105202.1-204ENST00000502167 1781 ntTSL 1 (best) BASIC17.09■□□□□ 0.33
CHRNB2P17787 LILRB5-202ENST00000345866 1864 ntTSL 2 BASIC17.09■□□□□ 0.33
CHRNB2P17787 TSEN2-207ENST00000454502 1909 ntTSL 1 (best) BASIC17.09■□□□□ 0.33
CHRNB2P17787 SLC44A3-206ENST00000527077 1943 ntTSL 2 BASIC17.09■□□□□ 0.33
CHRNB2P17787 TMPRSS13-203ENST00000524993 1950 ntAPPRIS P3 TSL 1 (best) BASIC17.09■□□□□ 0.33
CHRNB2P17787 LFNG-204ENST00000402045 2058 ntTSL 1 (best) BASIC17.09■□□□□ 0.33
CHRNB2P17787 TANK-202ENST00000392749 2171 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
CHRNB2P17787 SHANK1-201ENST00000293441 6643 ntAPPRIS P2 TSL 1 (best) BASIC17.09■□□□□ 0.33
CHRNB2P17787 AC091100.1-201ENST00000558424 2354 ntTSL 2 BASIC17.09■□□□□ 0.33
CHRNB2P17787 EPS15L1-207ENST00000594975 2489 ntTSL 2 BASIC17.09■□□□□ 0.33
CHRNB2P17787 PHTF1-201ENST00000357783 2747 ntTSL 1 (best) BASIC17.09■□□□□ 0.33
CHRNB2P17787 INTS4P1-202ENST00000587624 2985 ntTSL 5 BASIC17.09■□□□□ 0.33
CHRNB2P17787 EML3-202ENST00000394773 3256 ntAPPRIS P2 TSL 1 (best) BASIC17.09■□□□□ 0.33
CHRNB2P17787 ATP2C1-224ENST00000533801 3690 ntTSL 1 (best) BASIC17.09■□□□□ 0.33
CHRNB2P17787 TRAK1-209ENST00000487159 5536 ntAPPRIS ALT2 TSL 5 BASIC17.09■□□□□ 0.33
CHRNB2P17787 PCDH7-201ENST00000361762 6403 ntAPPRIS P3 TSL 1 (best) BASIC17.08■□□□□ 0.33
CHRNB2P17787 APBA2-205ENST00000558330 3349 ntTSL 2 BASIC17.08■□□□□ 0.33
CHRNB2P17787 RASA4B-202ENST00000465829 2931 ntAPPRIS ALT1 TSL 1 (best) BASIC17.08■□□□□ 0.33
CHRNB2P17787 OTX1-201ENST00000282549 2861 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.33
CHRNB2P17787 OTX1-202ENST00000366671 2861 ntAPPRIS P1 TSL 3 BASIC17.08■□□□□ 0.33
CHRNB2P17787 CACFD1-206ENST00000540581 2880 ntAPPRIS ALT2 TSL 2 BASIC17.08■□□□□ 0.33
CHRNB2P17787 AP002360.1-202ENST00000530460 2462 ntAPPRIS ALT2 BASIC17.08■□□□□ 0.33
CHRNB2P17787 STXBP5-207ENST00000546097 2160 ntTSL 1 (best) BASIC17.08■□□□□ 0.33
CHRNB2P17787 AP000704.1-201ENST00000637940 2182 ntTSL 5 BASIC17.08■□□□□ 0.33
CHRNB2P17787 SLC2A9-201ENST00000264784 1850 ntAPPRIS P4 TSL 1 (best) BASIC17.08■□□□□ 0.33
CHRNB2P17787 DOK3-203ENST00000377112 1884 ntTSL 2 BASIC17.08■□□□□ 0.33
CHRNB2P17787 AC020658.6-201ENST00000623564 1870 ntBASIC17.08■□□□□ 0.33
CHRNB2P17787 ACSM2A-203ENST00000417235 1835 ntTSL 2 BASIC17.08■□□□□ 0.33
CHRNB2P17787 ACSL4-201ENST00000340800 5333 ntAPPRIS P4 TSL 5 BASIC17.08■□□□□ 0.33
CHRNB2P17787 SCRIB-203ENST00000377533 5108 ntAPPRIS ALT2 TSL 1 (best) BASIC17.08■□□□□ 0.32
CHRNB2P17787 SLC22A6-203ENST00000421062 1560 ntTSL 1 (best) BASIC17.08■□□□□ 0.32
CHRNB2P17787 MDFIC-201ENST00000257724 4598 ntTSL 1 (best) BASIC17.08■□□□□ 0.32
CHRNB2P17787 RDX-201ENST00000343115 4491 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
CHRNB2P17787 DNAJC7-201ENST00000316603 1468 ntTSL 1 (best) BASIC17.08■□□□□ 0.32
CHRNB2P17787 KCNK9-203ENST00000520439 1441 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
CHRNB2P17787 LCE1A-201ENST00000335123 422 ntAPPRIS P1 BASIC17.08■□□□□ 0.32
CHRNB2P17787 ROMO1-201ENST00000336695 496 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
CHRNB2P17787 LCN2-203ENST00000373017 848 ntAPPRIS P2 TSL 5 BASIC17.08■□□□□ 0.32
CHRNB2P17787 CACNB2-206ENST00000377328 1233 ntTSL 1 (best) BASIC17.08■□□□□ 0.32
CHRNB2P17787 CAPG-205ENST00000409921 1195 ntTSL 1 (best) BASIC17.08■□□□□ 0.32
CHRNB2P17787 LINC01273-201ENST00000411453 685 ntTSL 2 BASIC17.08■□□□□ 0.32
CHRNB2P17787 AC004461.1-201ENST00000412461 403 ntBASIC17.08■□□□□ 0.32
CHRNB2P17787 AC078942.1-201ENST00000448698 589 ntTSL 4 BASIC17.08■□□□□ 0.32
CHRNB2P17787 CCDC74BP1-201ENST00000508880 1123 ntBASIC17.08■□□□□ 0.32
CHRNB2P17787 LINC02055-207ENST00000524346 706 ntTSL 3 BASIC17.08■□□□□ 0.32
CHRNB2P17787 MIR4313-201ENST00000580760 101 ntBASIC17.08■□□□□ 0.32
CHRNB2P17787 PRELID3A-208ENST00000590956 777 ntTSL 2 BASIC17.08■□□□□ 0.32
CHRNB2P17787 GDF6-201ENST00000287020 3701 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
CHRNB2P17787 ARHGAP45-212ENST00000590577 3218 ntTSL 2 BASIC17.08■□□□□ 0.32
CHRNB2P17787 SYT3-201ENST00000338916 2915 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
CHRNB2P17787 LMNB2-201ENST00000325327 4671 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
Retrieved 100 of 98,524 protein–RNA pairs in 42.6 ms