Protein–RNA interactions for Protein: O76070

SNCG, Gamma-synuclein, humanhuman

Predictions only

Length 127 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SNCGO76070 POLE-207ENST00000535270 6800 ntAPPRIS ALT2 TSL 1 (best) BASIC10.92□□□□□ -0.66
SNCGO76070 TRPC6-206ENST00000532133 2648 ntTSL 5 BASIC10.92□□□□□ -0.66
SNCGO76070 COL2A1-201ENST00000337299 4257 ntAPPRIS P3 TSL 1 (best) BASIC10.92□□□□□ -0.66
SNCGO76070 MAGEA3-203ENST00000598245 1762 ntAPPRIS P1 TSL 2 BASIC10.92□□□□□ -0.66
SNCGO76070 MAGEA6-204ENST00000616035 1762 ntAPPRIS P1 TSL 5 BASIC10.92□□□□□ -0.66
SNCGO76070 CNTNAP3B-211ENST00000612828 7455 ntAPPRIS ALT2 TSL 1 (best) BASIC10.92□□□□□ -0.66
SNCGO76070 PREX1-201ENST00000371941 6636 ntAPPRIS P1 TSL 1 (best) BASIC10.92□□□□□ -0.66
SNCGO76070 C9orf43-202ENST00000374165 2049 ntAPPRIS P1 TSL 1 (best) BASIC10.92□□□□□ -0.66
SNCGO76070 LINC00839-202ENST00000429940 2253 ntTSL 2 BASIC10.92□□□□□ -0.66
SNCGO76070 APLP1-202ENST00000537454 2266 ntTSL 2 BASIC10.92□□□□□ -0.66
SNCGO76070 SLC12A6-206ENST00000558589 3866 ntTSL 1 (best) BASIC10.92□□□□□ -0.66
SNCGO76070 EVA1A-205ENST00000410113 1747 ntAPPRIS P2 TSL 3 BASIC10.92□□□□□ -0.66
SNCGO76070 ISYNA1-202ENST00000457269 1703 ntTSL 2 BASIC10.92□□□□□ -0.66
SNCGO76070 PTCHD3-202ENST00000622555 1720 ntTSL 1 (best) BASIC10.92□□□□□ -0.66
SNCGO76070 AL132857.2-201ENST00000634305 1737 ntTSL 5 BASIC10.92□□□□□ -0.66
SNCGO76070 STN1-201ENST00000224950 1417 ntAPPRIS P1 TSL 1 (best) BASIC10.92□□□□□ -0.66
SNCGO76070 NFATC2-203ENST00000414705 2974 ntAPPRIS ALT2 TSL 1 (best) BASIC10.92□□□□□ -0.66
SNCGO76070 SCAP-215ENST00000545718 2950 ntTSL 5 BASIC10.92□□□□□ -0.66
SNCGO76070 MST1R-201ENST00000296474 4536 ntAPPRIS P3 TSL 1 (best) BASIC10.92□□□□□ -0.66
SNCGO76070 CERKL-206ENST00000410087 3208 ntAPPRIS ALT2 TSL 1 (best) BASIC10.92□□□□□ -0.66
SNCGO76070 ZNF398-201ENST00000426851 5268 ntTSL 1 (best) BASIC10.92□□□□□ -0.66
SNCGO76070 TNN-203ENST00000622870 3719 ntTSL 5 BASIC10.92□□□□□ -0.66
SNCGO76070 AC092053.1-201ENST00000605787 1936 ntBASIC10.92□□□□□ -0.66
SNCGO76070 APBB1-218ENST00000608655 1920 ntTSL 5 BASIC10.92□□□□□ -0.66
SNCGO76070 TBRG4-215ENST00000494076 2190 ntAPPRIS P1 TSL 2 BASIC10.92□□□□□ -0.66
SNCGO76070 ASB7-201ENST00000332783 4985 ntAPPRIS P1 TSL 1 (best) BASIC10.92□□□□□ -0.66
SNCGO76070 PLA2G3-201ENST00000215885 2697 ntAPPRIS P1 TSL 1 (best) BASIC10.92□□□□□ -0.66
SNCGO76070 MYADM-203ENST00000391769 3186 ntAPPRIS P1 TSL 1 (best) BASIC10.91□□□□□ -0.66
SNCGO76070 RYR1-202ENST00000359596 15117 ntAPPRIS P3 TSL 5 BASIC10.91□□□□□ -0.66
SNCGO76070 RNF145-202ENST00000424310 3613 ntAPPRIS P1 TSL 1 (best) BASIC10.91□□□□□ -0.66
SNCGO76070 FKBP5-203ENST00000539068 3827 ntAPPRIS P1 TSL 1 (best) BASIC10.91□□□□□ -0.66
SNCGO76070 IL17RD-203ENST00000463523 2348 ntTSL 1 (best) BASIC10.91□□□□□ -0.66
SNCGO76070 SLC24A4-204ENST00000531433 4531 ntAPPRIS ALT2 TSL 2 BASIC10.91□□□□□ -0.66
SNCGO76070 AC232323.1-201ENST00000540724 2099 ntBASIC10.91□□□□□ -0.66
SNCGO76070 REXO1L5P-201ENST00000622260 2098 ntBASIC10.91□□□□□ -0.66
SNCGO76070 GYG1-214ENST00000627418 1831 ntTSL 5 BASIC10.91□□□□□ -0.66
SNCGO76070 ESPN-201ENST00000377828 3531 ntAPPRIS P2 TSL 1 (best) BASIC10.91□□□□□ -0.66
SNCGO76070 AL357673.2-201ENST00000623663 4969 ntTSL 5 BASIC10.91□□□□□ -0.66
SNCGO76070 TBC1D9B-208ENST00000519746 2755 ntTSL 1 (best) BASIC10.91□□□□□ -0.66
SNCGO76070 ULBP2-201ENST00000367351 1349 ntAPPRIS P1 TSL 1 (best) BASIC10.91□□□□□ -0.66
SNCGO76070 MICAL2-203ENST00000379612 6625 ntTSL 1 (best) BASIC10.91□□□□□ -0.66
SNCGO76070 PRAF2-202ENST00000553851 1334 ntAPPRIS P1 TSL 1 (best) BASIC10.91□□□□□ -0.66
SNCGO76070 ARIH2-205ENST00000449376 2278 ntAPPRIS P1 TSL 1 (best) BASIC10.91□□□□□ -0.66
SNCGO76070 CHD4-211ENST00000544484 6554 ntTSL 2 BASIC10.91□□□□□ -0.66
SNCGO76070 RAPGEF4-AS1-202ENST00000435328 4625 ntTSL 1 (best) BASIC10.91□□□□□ -0.66
SNCGO76070 C17orf100-201ENST00000542475 1756 ntAPPRIS P1 BASIC10.91□□□□□ -0.66
SNCGO76070 TFE3-201ENST00000315869 3415 ntAPPRIS P1 TSL 1 (best) BASIC10.91□□□□□ -0.66
SNCGO76070 CARMIL2-202ENST00000545661 4119 ntAPPRIS ALT2 TSL 1 (best) BASIC10.91□□□□□ -0.66
SNCGO76070 IL21R-201ENST00000337929 4849 ntAPPRIS P1 TSL 1 (best) BASIC10.91□□□□□ -0.66
SNCGO76070 SERP1-201ENST00000239944 3171 ntAPPRIS P1 TSL 1 (best) BASIC10.91□□□□□ -0.66
SNCGO76070 Z82170.1-201ENST00000625081 3192 ntBASIC10.91□□□□□ -0.66
SNCGO76070 TMEM82-201ENST00000375782 1520 ntAPPRIS P1 TSL 1 (best) BASIC10.91□□□□□ -0.66
SNCGO76070 YTHDF2-201ENST00000373812 2925 ntAPPRIS P1 TSL 1 (best) BASIC10.91□□□□□ -0.66
SNCGO76070 ACSL4-202ENST00000348502 5032 ntAPPRIS ALT1 TSL 1 (best) BASIC10.91□□□□□ -0.66
SNCGO76070 SNX6-202ENST00000396526 3398 ntTSL 1 (best) BASIC10.91□□□□□ -0.66
SNCGO76070 TMEM223-201ENST00000307366 1288 ntAPPRIS P1 TSL 1 (best) BASIC10.91□□□□□ -0.66
SNCGO76070 MED4-202ENST00000378586 931 ntAPPRIS ALT2 TSL 2 BASIC10.91□□□□□ -0.66
SNCGO76070 VSIG2-202ENST00000403470 1191 ntTSL 2 BASIC10.91□□□□□ -0.66
SNCGO76070 KRASP1-201ENST00000407852 552 ntBASIC10.91□□□□□ -0.66
SNCGO76070 MRPL53-202ENST00000409710 386 ntTSL 2 BASIC10.91□□□□□ -0.66
SNCGO76070 LINC01637-201ENST00000444039 684 ntTSL 2 BASIC10.91□□□□□ -0.66
SNCGO76070 ZNF529-AS1-202ENST00000475219 1033 ntTSL 1 (best) BASIC10.91□□□□□ -0.66
SNCGO76070 AC113404.2-201ENST00000507884 177 ntBASIC10.91□□□□□ -0.66
SNCGO76070 TMEM9B-AS1-201ENST00000525484 1053 ntTSL 5 BASIC10.91□□□□□ -0.66
SNCGO76070 C11orf24-209ENST00000533310 980 ntAPPRIS ALT2 TSL 5 BASIC10.91□□□□□ -0.66
SNCGO76070 AF274858.3-202ENST00000569906 755 ntTSL 3 BASIC10.91□□□□□ -0.66
SNCGO76070 AC127496.6-201ENST00000576215 338 ntTSL 3 BASIC10.91□□□□□ -0.66
SNCGO76070 LRRC75A-AS1-225ENST00000581913 1091 ntTSL 2 BASIC10.91□□□□□ -0.66
SNCGO76070 PPP1R14A-205ENST00000591585 949 ntTSL 2 BASIC10.91□□□□□ -0.66
SNCGO76070 CR392000.1-201ENST00000624770 1228 ntBASIC10.91□□□□□ -0.66
SNCGO76070 SHISA2-201ENST00000319420 2860 ntAPPRIS P1 TSL 1 (best) BASIC10.91□□□□□ -0.66
SNCGO76070 PYCR1-217ENST00000629768 1740 ntTSL 5 BASIC10.91□□□□□ -0.66
SNCGO76070 NUMA1-202ENST00000358965 7227 ntAPPRIS ALT2 TSL 2 BASIC10.91□□□□□ -0.66
SNCGO76070 PRKRIP1-201ENST00000397912 2159 ntAPPRIS P1 TSL 1 (best) BASIC10.91□□□□□ -0.66
SNCGO76070 STRA6-207ENST00000535552 2631 ntTSL 2 BASIC10.91□□□□□ -0.66
SNCGO76070 PER3-202ENST00000377532 6279 ntAPPRIS ALT2 TSL 1 (best) BASIC10.91□□□□□ -0.66
SNCGO76070 TMEM104-204ENST00000582330 4679 ntAPPRIS P1 TSL 2 BASIC10.91□□□□□ -0.66
SNCGO76070 JPH3-201ENST00000284262 3985 ntAPPRIS P1 TSL 1 (best) BASIC10.91□□□□□ -0.66
SNCGO76070 SPACA1-201ENST00000237201 1499 ntAPPRIS P1 TSL 1 (best) BASIC10.91□□□□□ -0.66
SNCGO76070 CXCR5-201ENST00000292174 4431 ntAPPRIS P1 TSL 1 (best) BASIC10.91□□□□□ -0.66
SNCGO76070 CENPA-202ENST00000335756 1452 ntAPPRIS P1 TSL 1 (best) BASIC10.91□□□□□ -0.66
SNCGO76070 DHRS4L2-203ENST00000534993 1450 ntTSL 3 BASIC10.91□□□□□ -0.66
SNCGO76070 KLHDC3-202ENST00000326974 1909 ntAPPRIS P1 TSL 1 (best) BASIC10.91□□□□□ -0.66
SNCGO76070 PPT2-246ENST00000375137 1945 ntAPPRIS ALT2 TSL 1 (best) BASIC10.91□□□□□ -0.66
SNCGO76070 CSK-202ENST00000439220 1900 ntAPPRIS P1 TSL 2 BASIC10.91□□□□□ -0.66
SNCGO76070 DNM1-201ENST00000341179 3254 ntAPPRIS ALT1 TSL 1 (best) BASIC10.91□□□□□ -0.66
SNCGO76070 HDGFL3-201ENST00000299633 12733 ntAPPRIS P1 TSL 1 (best) BASIC10.91□□□□□ -0.66
SNCGO76070 MEFV-201ENST00000219596 3499 ntAPPRIS P2 TSL 1 (best) BASIC10.91□□□□□ -0.66
SNCGO76070 DYSF-209ENST00000410041 6594 ntAPPRIS ALT2 TSL 1 (best) BASIC10.91□□□□□ -0.66
SNCGO76070 PHTF1-201ENST00000357783 2747 ntTSL 1 (best) BASIC10.91□□□□□ -0.66
SNCGO76070 CLPTM1-202ENST00000541297 2732 ntTSL 2 BASIC10.91□□□□□ -0.66
SNCGO76070 CD1D-201ENST00000368171 2253 ntAPPRIS P1 TSL 1 (best) BASIC10.91□□□□□ -0.66
SNCGO76070 IKZF1-211ENST00000440768 5511 ntTSL 5 BASIC10.91□□□□□ -0.66
SNCGO76070 KIF25-203ENST00000443060 1613 ntAPPRIS P1 TSL 5 BASIC10.91□□□□□ -0.66
SNCGO76070 SIGIRR-220ENST00000531205 1649 ntTSL 2 BASIC10.91□□□□□ -0.66
SNCGO76070 HPSE-201ENST00000311412 4615 ntAPPRIS P1 TSL 1 (best) BASIC10.91□□□□□ -0.66
SNCGO76070 MUC1-223ENST00000611571 4170 ntAPPRIS ALT2 TSL 5 BASIC10.91□□□□□ -0.66
SNCGO76070 PRNP-201ENST00000379440 2657 ntAPPRIS P1 TSL 1 (best) BASIC10.91□□□□□ -0.66
SNCGO76070 FAM151A-201ENST00000302250 2005 ntAPPRIS P2 TSL 1 (best) BASIC10.91□□□□□ -0.66
SNCGO76070 MAP7D3-201ENST00000316077 4567 ntAPPRIS P3 TSL 1 (best) BASIC10.91□□□□□ -0.66
Retrieved 100 of 98,524 protein–RNA pairs in 34.2 ms