RNA–Protein interactions for RNA: ENST00000612828.4

CNTNAP3B-211, Transcript of contactin associated protein like 3B, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene CNTNAP3B, Length 7,455 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CNTNAP3B-211ENST00000612828 MYT1Q01538 1121 aa17.95■□□□□ 0.46
CNTNAP3B-211ENST00000612828 PELP1Q8IZL8 1130 aaKnown RBP17.94■□□□□ 0.46
CNTNAP3B-211ENST00000612828 DCAF8L2P0C7V8 631 aa17.88■□□□□ 0.45
CNTNAP3B-211ENST00000612828 ERICH6Q7L0X2 663 aa17.66■□□□□ 0.42
CNTNAP3B-211ENST00000612828 EHMT2Q96KQ7 1210 aa17.4■□□□□ 0.38
CNTNAP3B-211ENST00000612828 SUPT5HO00267 1087 aaKnown RBP17.12■□□□□ 0.33
CNTNAP3B-211ENST00000612828 NISCHQ9Y2I1 1504 aa17.07■□□□□ 0.32
CNTNAP3B-211ENST00000612828 CCER1Q8TC90 406 aaPredicted RBP16.94■□□□□ 0.3
CNTNAP3B-211ENST00000612828 SHROOM4Q9ULL8 1493 aa16.86■□□□□ 0.29
CNTNAP3B-211ENST00000612828 TTBK1Q5TCY1 1321 aaPredicted RBP16.73■□□□□ 0.27
CNTNAP3B-211ENST00000612828 DAXXQ9UER7 740 aaPredicted RBP16.64■□□□□ 0.25
CNTNAP3B-211ENST00000612828 CHIC1Q5VXU3 224 aa16.64■□□□□ 0.25
CNTNAP3B-211ENST00000612828 FAM9AQ8IZU1 332 aaPredicted RBP16.52■□□□□ 0.24
CNTNAP3B-211ENST00000612828 ATP1B4Q9UN42 357 aaPredicted RBP16.45■□□□□ 0.22
CNTNAP3B-211ENST00000612828 APLP2Q06481 763 aa16.42■□□□□ 0.22
CNTNAP3B-211ENST00000612828 RANGAP1P46060 587 aaPredicted RBP16.38■□□□□ 0.21
CNTNAP3B-211ENST00000612828 MYT1LQ9UL68 1186 aa16.35■□□□□ 0.21
CNTNAP3B-211ENST00000612828 SLC4A1APQ9BWU0 796 aaKnown RBP16.34■□□□□ 0.21
CNTNAP3B-211ENST00000612828 CNGB1Q14028 1251 aaPredicted RBP16.34■□□□□ 0.21
CNTNAP3B-211ENST00000612828 BCL11AQ9H165 835 aa16.33■□□□□ 0.21
CNTNAP3B-211ENST00000612828 PCGF6Q9BYE7 350 aa16.32■□□□□ 0.2
CNTNAP3B-211ENST00000612828 YTHDC1Q96MU7 727 aaKnown RBP16.27■□□□□ 0.19
CNTNAP3B-211ENST00000612828 POLR3GLQ9BT43 218 aa16.24■□□□□ 0.19
CNTNAP3B-211ENST00000612828 NEFLP07196 543 aa16.23■□□□□ 0.19
CNTNAP3B-211ENST00000612828 SLC24A1O60721 1099 aa16.22■□□□□ 0.19
CNTNAP3B-211ENST00000612828 NCBP3Q53F19 620 aaKnown RBP16.12■□□□□ 0.17
CNTNAP3B-211ENST00000612828 ZNF316A6NFI3 1004 aaPredicted RBP16.1■□□□□ 0.17
CNTNAP3B-211ENST00000612828 CLSPNQ9HAW4 1339 aa16.07■□□□□ 0.16
CNTNAP3B-211ENST00000612828 TULP1O00294 542 aaPredicted RBP15.88■□□□□ 0.13
CNTNAP3B-211ENST00000612828 CENPBP07199 599 aaPredicted RBP15.86■□□□□ 0.13
CNTNAP3B-211ENST00000612828 RTL5Q5HYW3 569 aaPredicted RBP15.74■□□□□ 0.11
CNTNAP3B-211ENST00000612828 PPARGC1BQ86YN6 1023 aaKnown RBP15.68■□□□□ 0.1
CNTNAP3B-211ENST00000612828 HRCP23327 699 aa15.68■□□□□ 0.1
CNTNAP3B-211ENST00000612828 TRIM41Q8WV44 630 aa15.65■□□□□ 0.1
CNTNAP3B-211ENST00000612828 CDK11BP21127 795 aaKnown RBP15.65■□□□□ 0.1
CNTNAP3B-211ENST00000612828 ZBTB47Q9UFB7 747 aaPredicted RBP15.65■□□□□ 0.1
CNTNAP3B-211ENST00000612828 CDK11AQ9UQ88 783 aaPredicted RBP15.65■□□□□ 0.1
CNTNAP3B-211ENST00000612828 LOC105371045A0A1W2PR82 267 aa15.6■□□□□ 0.09
CNTNAP3B-211ENST00000612828 EIF5BO60841 1220 aaKnown RBP15.57■□□□□ 0.08
CNTNAP3B-211ENST00000612828 A0A0G2JS52 829 aa15.53■□□□□ 0.08
CNTNAP3B-211ENST00000612828 ZEB1P37275 1124 aaPredicted RBP15.52■□□□□ 0.08
CNTNAP3B-211ENST00000612828 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP15.5■□□□□ 0.07
CNTNAP3B-211ENST00000612828 HNRNPUL2Q1KMD3 747 aaKnown RBP15.5■□□□□ 0.07
CNTNAP3B-211ENST00000612828 PLPPR3Q6T4P5 718 aa15.49■□□□□ 0.07
CNTNAP3B-211ENST00000612828 BCANQ96GW7 911 aa15.47■□□□□ 0.07
CNTNAP3B-211ENST00000612828 PRM3Q9NNZ6 103 aa15.43■□□□□ 0.06
CNTNAP3B-211ENST00000612828 TRIM26Q12899 539 aaPredicted RBP15.42■□□□□ 0.06
CNTNAP3B-211ENST00000612828 AMER1Q5JTC6 1135 aaPredicted RBP15.36■□□□□ 0.05
CNTNAP3B-211ENST00000612828 UBTFP17480 764 aaKnown RBP15.33■□□□□ 0.04
CNTNAP3B-211ENST00000612828 ITGAEP38570 1179 aa15.31■□□□□ 0.04
CNTNAP3B-211ENST00000612828 ARXQ96QS3 562 aa15.3■□□□□ 0.04
CNTNAP3B-211ENST00000612828 KRI1Q8N9T8 703 aaKnown RBP15.27■□□□□ 0.03
CNTNAP3B-211ENST00000612828 FBXO3Q9UK99 471 aa15.25■□□□□ 0.03
CNTNAP3B-211ENST00000612828 SCAF1Q9H7N4 1312 aaKnown RBP15.23■□□□□ 0.03
CNTNAP3B-211ENST00000612828 CANXP27824 592 aaKnown RBP15.2■□□□□ 0.02
CNTNAP3B-211ENST00000612828 PLEKHG5O94827 1062 aa15.18■□□□□ 0.02
CNTNAP3B-211ENST00000612828 ANP32BQ92688 251 aaKnown RBP15.17■□□□□ 0.02
CNTNAP3B-211ENST00000612828 CLSTN1O94985 981 aa15.15■□□□□ 0.02
CNTNAP3B-211ENST00000612828 HSP90AA1P07900 732 aaKnown RBP15.13■□□□□ 0.01
CNTNAP3B-211ENST00000612828 TAOK2Q9UL54 1235 aa15.11■□□□□ 0.01
CNTNAP3B-211ENST00000612828 TPRNQ4KMQ1 711 aa15.05■□□□□ -0
CNTNAP3B-211ENST00000612828 NPM2Q86SE8 214 aaKnown RBP15.04■□□□□ -0
CNTNAP3B-211ENST00000612828 ANO8Q9HCE9 1232 aaPredicted RBP15.01□□□□□ -0.01
CNTNAP3B-211ENST00000612828 GLIPR1L2Q4G1C9 344 aa14.99□□□□□ -0.01
CNTNAP3B-211ENST00000612828 DIEXFQ68CQ4 756 aaKnown RBP14.95□□□□□ -0.02
CNTNAP3B-211ENST00000612828 NEFMP07197 916 aa14.95□□□□□ -0.02
CNTNAP3B-211ENST00000612828 PDE4CQ08493 712 aa14.9□□□□□ -0.02
CNTNAP3B-211ENST00000612828 SENP3Q9H4L4 574 aaPredicted RBP14.89□□□□□ -0.03
CNTNAP3B-211ENST00000612828 GTF3C3Q9Y5Q9 886 aa14.89□□□□□ -0.03
CNTNAP3B-211ENST00000612828 ZBTB7CA1YPR0 619 aa14.86□□□□□ -0.03
CNTNAP3B-211ENST00000612828 ZNF326Q5BKZ1 582 aaKnown RBP14.83□□□□□ -0.04
CNTNAP3B-211ENST00000612828 TRIM44Q96DX7 344 aaPredicted RBP14.81□□□□□ -0.04
CNTNAP3B-211ENST00000612828 NPHP1O15259 732 aa14.79□□□□□ -0.04
CNTNAP3B-211ENST00000612828 ZBTB4Q9P1Z0 1013 aaPredicted RBP14.72□□□□□ -0.05
CNTNAP3B-211ENST00000612828 ACIN1Q9UKV3 1341 aaKnown RBP14.68□□□□□ -0.06
CNTNAP3B-211ENST00000612828 TNNT2P45379 298 aaPredicted RBP14.67□□□□□ -0.06
CNTNAP3B-211ENST00000612828 ISY1Q9ULR0 285 aaKnown RBP14.66□□□□□ -0.06
CNTNAP3B-211ENST00000612828 NBR1Q14596 966 aa14.65□□□□□ -0.06
CNTNAP3B-211ENST00000612828 DNTTIP2Q5QJE6 756 aaKnown RBP14.63□□□□□ -0.07
CNTNAP3B-211ENST00000612828 FKBP8Q14318 412 aa14.61□□□□□ -0.07
CNTNAP3B-211ENST00000612828 ZRSR1Q15695 479 aaKnown RBP14.59□□□□□ -0.07
CNTNAP3B-211ENST00000612828 WWC1Q8IX03 1113 aa14.59□□□□□ -0.07
CNTNAP3B-211ENST00000612828 TRIM52Q96A61 297 aa14.59□□□□□ -0.07
CNTNAP3B-211ENST00000612828 ANP32AP39687 249 aaKnown RBP14.59□□□□□ -0.07
CNTNAP3B-211ENST00000612828 ESF1Q9H501 851 aaKnown RBP14.57□□□□□ -0.08
CNTNAP3B-211ENST00000612828 ERICH6BQ5W0A0 696 aa14.56□□□□□ -0.08
CNTNAP3B-211ENST00000612828 C14orf37Q86TY3 774 aa14.56□□□□□ -0.08
CNTNAP3B-211ENST00000612828 NEUROD1Q13562 356 aa14.55□□□□□ -0.08
CNTNAP3B-211ENST00000612828 NOC3LQ8WTT2 800 aaKnown RBP14.55□□□□□ -0.08
CNTNAP3B-211ENST00000612828 HAP1P54257 671 aaPredicted RBP14.55□□□□□ -0.08
CNTNAP3B-211ENST00000612828 STAG3Q9UJ98 1225 aa14.54□□□□□ -0.08
CNTNAP3B-211ENST00000612828 CNKSR2Q8WXI2 1034 aa14.53□□□□□ -0.08
CNTNAP3B-211ENST00000612828 APPP05067 770 aa14.53□□□□□ -0.08
CNTNAP3B-211ENST00000612828 MYO15BQ96JP2 1530 aa14.52□□□□□ -0.08
CNTNAP3B-211ENST00000612828 PLCB2Q00722 1185 aa14.51□□□□□ -0.09
CNTNAP3B-211ENST00000612828 UPF2Q9HAU5 1272 aaKnown RBP14.5□□□□□ -0.09
CNTNAP3B-211ENST00000612828 PABPN1Q86U42 306 aaKnown RBP eCLIP14.5□□□□□ -0.09
CNTNAP3B-211ENST00000612828 NCLP19338 710 aaKnown RBP14.49□□□□□ -0.09
CNTNAP3B-211ENST00000612828 CALRP27797 417 aaKnown RBP14.49□□□□□ -0.09
CNTNAP3B-211ENST00000612828 AK7Q96M32 723 aa14.48□□□□□ -0.09
Retrieved 100 of 20,778 RNA–protein pairs in 31.8 ms