Protein–RNA interactions for Protein: O75445

USH2A, Usherin, humanhuman

Predictions only

Length 5,202 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
USH2AO75445 UBE3B-201ENST00000340074 1448 ntTSL 1 (best) BASIC7.05□□□□□ -1.28
USH2AO75445 C8G-201ENST00000224181 855 ntAPPRIS P1 TSL 1 (best) BASIC7.05□□□□□ -1.28
USH2AO75445 BST2-201ENST00000252593 1019 ntAPPRIS P1 TSL 1 (best) BASIC7.05□□□□□ -1.28
USH2AO75445 GATD1-203ENST00000397472 790 ntTSL 1 (best) BASIC7.05□□□□□ -1.28
USH2AO75445 MPV17-205ENST00000402310 906 ntTSL 5 BASIC7.05□□□□□ -1.28
USH2AO75445 AL162431.1-201ENST00000434447 543 ntTSL 3 BASIC7.05□□□□□ -1.28
USH2AO75445 OARD1-204ENST00000464633 717 ntTSL 2 BASIC7.05□□□□□ -1.28
USH2AO75445 AC108199.1-201ENST00000504249 508 ntTSL 3 BASIC7.05□□□□□ -1.28
USH2AO75445 NIP7-208ENST00000569637 1099 ntTSL 2 BASIC7.05□□□□□ -1.28
USH2AO75445 ETV2-208ENST00000621247 941 ntTSL 5 BASIC7.05□□□□□ -1.28
USH2AO75445 CRLF2-203ENST00000400841 1639 ntAPPRIS P1 TSL 1 (best) BASIC7.05□□□□□ -1.28
USH2AO75445 SLC39A3-202ENST00000455372 2940 ntTSL 1 (best) BASIC7.05□□□□□ -1.28
USH2AO75445 UBALD1-205ENST00000590891 2641 ntBASIC7.05□□□□□ -1.28
USH2AO75445 INPP5J-213ENST00000620191 2306 ntTSL 1 (best) BASIC7.05□□□□□ -1.28
USH2AO75445 VPS54-201ENST00000272322 3463 ntAPPRIS P3 TSL 5 BASIC7.05□□□□□ -1.28
USH2AO75445 SLC35E2B-204ENST00000614300 2156 ntTSL 1 (best) BASIC7.05□□□□□ -1.28
USH2AO75445 GPS1-228ENST00000624957 1825 ntAPPRIS ALT1 TSL 5 BASIC7.05□□□□□ -1.28
USH2AO75445 HIST1H1D-201ENST00000244534 666 ntAPPRIS P1 BASIC7.05□□□□□ -1.28
USH2AO75445 TEX30-203ENST00000376022 828 ntTSL 2 BASIC7.05□□□□□ -1.28
USH2AO75445 TEX33-202ENST00000402860 986 ntAPPRIS P3 TSL 1 (best) BASIC7.05□□□□□ -1.28
USH2AO75445 NCK1-AS1-203ENST00000474250 827 ntTSL 2 BASIC7.05□□□□□ -1.28
USH2AO75445 AC093627.5-203ENST00000497320 746 ntTSL 2 BASIC7.05□□□□□ -1.28
USH2AO75445 MIR5196-201ENST00000578146 115 ntBASIC7.05□□□□□ -1.28
USH2AO75445 KSR1-207ENST00000578981 748 ntTSL 4 BASIC7.05□□□□□ -1.28
USH2AO75445 AC131235.3-202ENST00000608135 362 ntTSL 5 BASIC7.05□□□□□ -1.28
USH2AO75445 ETV2-207ENST00000619399 994 ntTSL 5 BASIC7.05□□□□□ -1.28
USH2AO75445 ATP6V0E2-207ENST00000479613 1666 ntTSL 2 BASIC7.05□□□□□ -1.28
USH2AO75445 EHF-212ENST00000533754 1501 ntAPPRIS P1 TSL 1 (best) BASIC7.05□□□□□ -1.28
USH2AO75445 PSMD4-201ENST00000368881 1333 ntTSL 5 BASIC7.05□□□□□ -1.28
USH2AO75445 PDLIM3-212ENST00000620787 2352 ntTSL 4 BASIC7.05□□□□□ -1.28
USH2AO75445 AGER-206ENST00000375070 1463 ntTSL 5 BASIC7.05□□□□□ -1.28
USH2AO75445 AGER-208ENST00000438221 1493 ntTSL 1 (best) BASIC7.05□□□□□ -1.28
USH2AO75445 NRBP1-203ENST00000379852 2163 ntAPPRIS P1 TSL 1 (best) BASIC7.05□□□□□ -1.28
USH2AO75445 PLD3-206ENST00000409587 2180 ntAPPRIS P1 TSL 5 BASIC7.05□□□□□ -1.28
USH2AO75445 ARHGEF4-206ENST00000428230 2172 ntTSL 5 BASIC7.05□□□□□ -1.28
USH2AO75445 TAAR5-201ENST00000258034 1014 ntAPPRIS P1 BASIC7.04□□□□□ -1.28
USH2AO75445 C6orf52-201ENST00000259983 619 ntAPPRIS P2 TSL 5 BASIC7.04□□□□□ -1.28
USH2AO75445 KLK8-204ENST00000391806 1051 ntTSL 1 (best) BASIC7.04□□□□□ -1.28
USH2AO75445 TP53I3-203ENST00000407482 747 ntTSL 1 (best) BASIC7.04□□□□□ -1.28
USH2AO75445 LINC01534-201ENST00000425254 815 ntTSL 2 BASIC7.04□□□□□ -1.28
USH2AO75445 CLDN11-207ENST00000486975 1139 ntTSL 2 BASIC7.04□□□□□ -1.28
USH2AO75445 NCK2-206ENST00000522586 490 ntTSL 5 BASIC7.04□□□□□ -1.28
USH2AO75445 FAM227B-210ENST00000560246 911 ntAPPRIS ALT2 TSL 3 BASIC7.04□□□□□ -1.28
USH2AO75445 AC010531.4-203ENST00000561709 660 ntTSL 3 BASIC7.04□□□□□ -1.28
USH2AO75445 PPY2P-201ENST00000582808 702 ntBASIC7.04□□□□□ -1.28
USH2AO75445 PPY2P-202ENST00000583761 657 ntTSL 1 (best) BASIC7.04□□□□□ -1.28
USH2AO75445 EGLN2-209ENST00000594140 991 ntTSL 2 BASIC7.04□□□□□ -1.28
USH2AO75445 TP53-221ENST00000615910 1149 ntTSL 5 BASIC7.04□□□□□ -1.28
USH2AO75445 AC244157.2-201ENST00000616239 1006 ntBASIC7.04□□□□□ -1.28
USH2AO75445 PRKCD-201ENST00000330452 2680 ntAPPRIS P1 TSL 1 (best) BASIC7.04□□□□□ -1.28
USH2AO75445 SGSH-203ENST00000570923 1546 ntTSL 2 BASIC7.04□□□□□ -1.28
USH2AO75445 CHTF18-202ENST00000317063 2988 ntAPPRIS ALT2 TSL 5 BASIC7.04□□□□□ -1.28
USH2AO75445 SLC47A2-201ENST00000325411 2258 ntAPPRIS P3 TSL 1 (best) BASIC7.04□□□□□ -1.28
USH2AO75445 SEC13-201ENST00000337354 1363 ntAPPRIS ALT1 TSL 1 (best) BASIC7.04□□□□□ -1.28
USH2AO75445 GNAO1-205ENST00000563661 1351 ntTSL 2 BASIC7.04□□□□□ -1.28
USH2AO75445 MUTYH-211ENST00000456914 1692 ntAPPRIS ALT2 TSL 1 (best) BASIC7.04□□□□□ -1.28
USH2AO75445 E4F1-204ENST00000564139 2493 ntTSL 1 (best) BASIC7.04□□□□□ -1.28
USH2AO75445 ZBTB32-201ENST00000262630 1960 ntAPPRIS P1 TSL 1 (best) BASIC7.04□□□□□ -1.28
USH2AO75445 KLK6-202ENST00000376851 1708 ntAPPRIS P1 TSL 1 (best) BASIC7.04□□□□□ -1.28
USH2AO75445 SYCE2-201ENST00000293695 1231 ntAPPRIS P2 TSL 1 (best) BASIC7.04□□□□□ -1.28
USH2AO75445 ATXN3-201ENST00000340660 1205 ntTSL 1 (best) BASIC7.04□□□□□ -1.28
USH2AO75445 AC079112.1-201ENST00000454972 939 ntBASIC7.04□□□□□ -1.28
USH2AO75445 SLC1A4-205ENST00000531327 1217 ntTSL 2 BASIC7.04□□□□□ -1.28
USH2AO75445 AC015910.1-201ENST00000579400 975 ntBASIC7.04□□□□□ -1.28
USH2AO75445 SNX11-210ENST00000582104 1282 ntTSL 2 BASIC7.04□□□□□ -1.28
USH2AO75445 AC091544.8-201ENST00000619490 361 ntBASIC7.04□□□□□ -1.28
USH2AO75445 BANP-202ENST00000355022 2164 ntTSL 1 (best) BASIC7.04□□□□□ -1.28
USH2AO75445 CD40-201ENST00000372276 1623 ntTSL 1 (best) BASIC7.04□□□□□ -1.28
USH2AO75445 KLHL40-201ENST00000287777 2517 ntAPPRIS P1 TSL 1 (best) BASIC7.04□□□□□ -1.28
USH2AO75445 GRAMD2B-217ENST00000515200 3109 ntTSL 5 BASIC7.04□□□□□ -1.28
USH2AO75445 LINC00221-201ENST00000603633 1656 ntTSL 2 BASIC7.04□□□□□ -1.28
USH2AO75445 WDR45-239ENST00000634944 1745 ntAPPRIS P1 TSL 5 BASIC7.04□□□□□ -1.28
USH2AO75445 DRD5P1-201ENST00000456605 1438 ntBASIC7.04□□□□□ -1.28
USH2AO75445 DDX31-201ENST00000310532 2408 ntTSL 2 BASIC7.04□□□□□ -1.28
USH2AO75445 C1orf159-204ENST00000379339 2429 ntAPPRIS ALT2 TSL 2 BASIC7.04□□□□□ -1.28
USH2AO75445 SRP68-201ENST00000307877 2649 ntAPPRIS P1 TSL 1 (best) BASIC7.04□□□□□ -1.28
USH2AO75445 CYR61-201ENST00000451137 2290 ntAPPRIS P1 TSL 1 (best) BASIC7.04□□□□□ -1.28
USH2AO75445 SBF2-AS1-201ENST00000498905 2709 ntTSL 5 BASIC7.04□□□□□ -1.28
USH2AO75445 MAX-201ENST00000246163 897 ntTSL 1 (best) BASIC7.04□□□□□ -1.28
USH2AO75445 ERCC1-203ENST00000340192 949 ntTSL 1 (best) BASIC7.04□□□□□ -1.28
USH2AO75445 BLVRA-202ENST00000402924 1161 ntAPPRIS P1 TSL 2 BASIC7.04□□□□□ -1.28
USH2AO75445 AC022137.2-201ENST00000503482 481 ntBASIC7.04□□□□□ -1.28
USH2AO75445 REEP5-205ENST00000504247 480 ntTSL 5 BASIC7.04□□□□□ -1.28
USH2AO75445 SAMD11P1-201ENST00000571429 661 ntBASIC7.04□□□□□ -1.28
USH2AO75445 KRT16P3-202ENST00000580113 1012 ntTSL 3 BASIC7.04□□□□□ -1.28
USH2AO75445 KRT16P1-203ENST00000581027 1012 ntTSL 5 BASIC7.04□□□□□ -1.28
USH2AO75445 AC000095.1-201ENST00000603208 874 ntBASIC7.04□□□□□ -1.28
USH2AO75445 AC107373.2-201ENST00000607735 490 ntBASIC7.04□□□□□ -1.28
USH2AO75445 AC006158.1-201ENST00000610661 249 ntBASIC7.04□□□□□ -1.28
USH2AO75445 OR2T27-203ENST00000641652 1285 ntAPPRIS P1 BASIC7.04□□□□□ -1.28
USH2AO75445 SLC25A24-204ENST00000569674 2357 ntBASIC7.04□□□□□ -1.28
USH2AO75445 BVES-202ENST00000336775 1663 ntAPPRIS P1 TSL 1 (best) BASIC7.04□□□□□ -1.28
USH2AO75445 TOM1L1-204ENST00000570371 2442 ntTSL 5 BASIC7.04□□□□□ -1.28
USH2AO75445 TMEM106A-202ENST00000541594 1330 ntTSL 2 BASIC7.04□□□□□ -1.28
USH2AO75445 TLK2-202ENST00000343388 3227 ntAPPRIS ALT1 TSL 1 (best) BASIC7.04□□□□□ -1.28
USH2AO75445 TMEM235-202ENST00000421688 2490 ntAPPRIS P1 TSL 5 BASIC7.04□□□□□ -1.28
USH2AO75445 ERGIC3-203ENST00000357394 1357 ntAPPRIS P4 TSL 2 BASIC7.04□□□□□ -1.28
USH2AO75445 SLC7A9-204ENST00000590341 1752 ntAPPRIS P1 TSL 1 (best) BASIC7.04□□□□□ -1.28
USH2AO75445 SLX1A-SULT1A3-202ENST00000565342 2195 ntTSL 2 BASIC7.04□□□□□ -1.28
USH2AO75445 TMEM161A-201ENST00000162044 1820 ntAPPRIS P1 TSL 1 (best) BASIC7.04□□□□□ -1.28
Retrieved 100 of 98,524 protein–RNA pairs in 29.7 ms