Protein–RNA interactions for Protein: H3BT56

CHKB-CPT1B, CHKB-CPT1B readthrough (NMD candidate) (Fragment), humanhuman

Predictions only

Length 60 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CHKB-CPT1BH3BT56 GGTLC1-202ENST00000286890 1028 ntAPPRIS P1 TSL 1 (best) BASIC8.94□□□□□ -0.98
CHKB-CPT1BH3BT56 KDM1B-201ENST00000297792 3811 ntAPPRIS P1 TSL 2 BASIC8.94□□□□□ -0.98
CHKB-CPT1BH3BT56 METTL24-201ENST00000338882 1119 ntAPPRIS P1 TSL 5 BASIC8.94□□□□□ -0.98
CHKB-CPT1BH3BT56 SULT1A1-202ENST00000350842 1282 ntTSL 3 BASIC8.94□□□□□ -0.98
CHKB-CPT1BH3BT56 TMEM54-202ENST00000373463 999 ntAPPRIS P1 TSL 1 (best) BASIC8.94□□□□□ -0.98
CHKB-CPT1BH3BT56 CEP104-201ENST00000378223 1121 ntTSL 1 (best) BASIC8.94□□□□□ -0.98
CHKB-CPT1BH3BT56 MIR564-202ENST00000385049 94 ntBASIC8.94□□□□□ -0.98
CHKB-CPT1BH3BT56 SPECC1-202ENST00000395522 2982 ntTSL 1 (best) BASIC8.94□□□□□ -0.98
CHKB-CPT1BH3BT56 MIEF2-202ENST00000395703 718 ntTSL 3 BASIC8.94□□□□□ -0.98
CHKB-CPT1BH3BT56 AL136116.3-201ENST00000402907 1138 ntBASIC8.94□□□□□ -0.98
CHKB-CPT1BH3BT56 AC091305.1-201ENST00000479476 895 ntBASIC8.94□□□□□ -0.98
CHKB-CPT1BH3BT56 HTT-AS-201ENST00000503893 515 ntTSL 4 BASIC8.94□□□□□ -0.98
CHKB-CPT1BH3BT56 TMEM191C-212ENST00000536718 480 ntAPPRIS ALT2 TSL 5 BASIC8.94□□□□□ -0.98
CHKB-CPT1BH3BT56 FAM174B-207ENST00000555748 866 ntAPPRIS ALT2 TSL 3 BASIC8.94□□□□□ -0.98
CHKB-CPT1BH3BT56 RGMA-211ENST00000557420 989 ntTSL 3 BASIC8.94□□□□□ -0.98
CHKB-CPT1BH3BT56 AC016588.1-201ENST00000591533 542 ntTSL 4 BASIC8.94□□□□□ -0.98
CHKB-CPT1BH3BT56 MIR663AHG-233ENST00000609248 830 ntTSL 5 BASIC8.94□□□□□ -0.98
CHKB-CPT1BH3BT56 AC006557.6-201ENST00000623071 864 ntBASIC8.94□□□□□ -0.98
CHKB-CPT1BH3BT56 LINC01230-201ENST00000625222 3017 ntBASIC8.94□□□□□ -0.98
CHKB-CPT1BH3BT56 NELFA-203ENST00000411638 2199 ntAPPRIS P1 TSL 1 (best) BASIC8.94□□□□□ -0.98
CHKB-CPT1BH3BT56 KCNG4-202ENST00000568181 2199 ntTSL 1 (best) BASIC8.94□□□□□ -0.98
CHKB-CPT1BH3BT56 AP000704.1-201ENST00000637940 2182 ntTSL 5 BASIC8.94□□□□□ -0.98
CHKB-CPT1BH3BT56 FP565260.3-204ENST00000623795 2238 ntTSL 2 BASIC8.94□□□□□ -0.98
CHKB-CPT1BH3BT56 TRAFD1-201ENST00000257604 3178 ntAPPRIS P2 TSL 2 BASIC8.94□□□□□ -0.98
CHKB-CPT1BH3BT56 IQCE-216ENST00000611775 2289 ntAPPRIS ALT2 TSL 2 BASIC8.94□□□□□ -0.98
CHKB-CPT1BH3BT56 METTL5-207ENST00000410097 1370 ntTSL 2 BASIC8.94□□□□□ -0.98
CHKB-CPT1BH3BT56 CRK-204ENST00000574295 1391 ntTSL 5 BASIC8.94□□□□□ -0.98
CHKB-CPT1BH3BT56 ZNF23-203ENST00000393539 3242 ntAPPRIS P3 TSL 1 (best) BASIC8.94□□□□□ -0.98
CHKB-CPT1BH3BT56 PMM2-201ENST00000268261 2313 ntAPPRIS P1 TSL 1 (best) BASIC8.94□□□□□ -0.98
CHKB-CPT1BH3BT56 TMEM123-201ENST00000361236 3321 ntAPPRIS ALT2 TSL 1 (best) BASIC8.94□□□□□ -0.98
CHKB-CPT1BH3BT56 AC004854.2-201ENST00000608450 1441 ntBASIC8.94□□□□□ -0.98
CHKB-CPT1BH3BT56 IFNL4-203ENST00000634680 1421 ntAPPRIS ALT2 TSL 1 (best) BASIC8.94□□□□□ -0.98
CHKB-CPT1BH3BT56 C16orf52-202ENST00000542527 4360 ntAPPRIS P1 TSL 5 BASIC8.94□□□□□ -0.98
CHKB-CPT1BH3BT56 YTHDC2-201ENST00000161863 6316 ntAPPRIS P1 TSL 1 (best) BASIC8.94□□□□□ -0.98
CHKB-CPT1BH3BT56 COL18A1-AS1-201ENST00000397787 3425 ntTSL 1 (best) BASIC8.94□□□□□ -0.98
CHKB-CPT1BH3BT56 REEP4-202ENST00000334530 1476 ntTSL 1 (best) BASIC8.94□□□□□ -0.98
CHKB-CPT1BH3BT56 TFCP2-201ENST00000257915 3546 ntAPPRIS P1 TSL 1 (best) BASIC8.94□□□□□ -0.98
CHKB-CPT1BH3BT56 BSDC1-201ENST00000341071 4599 ntTSL 2 BASIC8.94□□□□□ -0.98
CHKB-CPT1BH3BT56 PTX4-203ENST00000447419 1516 ntAPPRIS ALT2 TSL 5 BASIC8.94□□□□□ -0.98
CHKB-CPT1BH3BT56 TEP1-209ENST00000556935 7643 ntTSL 1 (best) BASIC8.94□□□□□ -0.98
CHKB-CPT1BH3BT56 TOX2-202ENST00000358131 2605 ntTSL 2 BASIC8.94□□□□□ -0.98
CHKB-CPT1BH3BT56 ADD2-202ENST00000355733 2654 ntAPPRIS ALT2 TSL 1 (best) BASIC8.94□□□□□ -0.98
CHKB-CPT1BH3BT56 PCDHGB5-202ENST00000621169 2670 ntAPPRIS ALT2 BASIC8.94□□□□□ -0.98
CHKB-CPT1BH3BT56 CPNE5-201ENST00000244751 3897 ntAPPRIS P1 TSL 1 (best) BASIC8.94□□□□□ -0.98
CHKB-CPT1BH3BT56 TLE4-204ENST00000376537 2793 ntTSL 1 (best) BASIC8.94□□□□□ -0.98
CHKB-CPT1BH3BT56 ZCCHC7-209ENST00000534928 2828 ntAPPRIS P1 TSL 1 (best) BASIC8.94□□□□□ -0.98
CHKB-CPT1BH3BT56 WNT3A-201ENST00000284523 2932 ntAPPRIS P1 TSL 1 (best) BASIC8.94□□□□□ -0.98
CHKB-CPT1BH3BT56 LAMA4-201ENST00000230538 6547 ntAPPRIS ALT2 TSL 1 (best) BASIC8.94□□□□□ -0.98
CHKB-CPT1BH3BT56 CACNA1C-201ENST00000327702 6616 ntAPPRIS ALT2 TSL 1 (best) BASIC8.94□□□□□ -0.98
CHKB-CPT1BH3BT56 HSPA4L-204ENST00000508776 3020 ntAPPRIS P1 TSL 2 BASIC8.94□□□□□ -0.98
CHKB-CPT1BH3BT56 AC009949.1-201ENST00000623048 1830 ntBASIC8.94□□□□□ -0.98
CHKB-CPT1BH3BT56 DDX54-201ENST00000306014 4377 ntAPPRIS P3 TSL 1 (best) BASIC8.94□□□□□ -0.98
CHKB-CPT1BH3BT56 BTN3A1-204ENST00000425234 1882 ntTSL 2 BASIC8.94□□□□□ -0.98
CHKB-CPT1BH3BT56 PCDHB9-201ENST00000316105 4415 ntAPPRIS P1 BASIC8.94□□□□□ -0.98
CHKB-CPT1BH3BT56 DZIP1-202ENST00000361156 7011 ntAPPRIS ALT2 TSL 5 BASIC8.93□□□□□ -0.98
CHKB-CPT1BH3BT56 AC092053.1-201ENST00000605787 1936 ntBASIC8.93□□□□□ -0.98
CHKB-CPT1BH3BT56 MAGEA2-207ENST00000620710 1947 ntAPPRIS P1 TSL 2 BASIC8.93□□□□□ -0.98
CHKB-CPT1BH3BT56 REXO1L11P-201ENST00000620964 1927 ntBASIC8.93□□□□□ -0.98
CHKB-CPT1BH3BT56 BST1-202ENST00000382346 1993 ntAPPRIS ALT2 TSL 5 BASIC8.93□□□□□ -0.98
CHKB-CPT1BH3BT56 C11orf58-201ENST00000228136 2049 ntAPPRIS P1 TSL 1 (best) BASIC8.93□□□□□ -0.98
CHKB-CPT1BH3BT56 GINS4-206ENST00000520710 2022 ntTSL 2 BASIC8.93□□□□□ -0.98
CHKB-CPT1BH3BT56 PSME3-203ENST00000541124 3366 ntTSL 1 (best) BASIC8.93□□□□□ -0.98
CHKB-CPT1BH3BT56 TNFAIP3-206ENST00000612899 4735 ntAPPRIS P1 TSL 5 BASIC8.93□□□□□ -0.98
CHKB-CPT1BH3BT56 PDK2-203ENST00000503176 3440 ntAPPRIS P1 TSL 1 (best) BASIC8.93□□□□□ -0.98
CHKB-CPT1BH3BT56 POLR2A-201ENST00000572844 2083 ntAPPRIS P1 TSL 1 (best) BASIC8.93□□□□□ -0.98
CHKB-CPT1BH3BT56 CELSR2-201ENST00000271332 10534 ntAPPRIS P1 TSL 1 (best) BASIC8.93□□□□□ -0.98
CHKB-CPT1BH3BT56 ATP7B-203ENST00000400366 6304 ntAPPRIS ALT2 TSL 1 (best) BASIC8.93□□□□□ -0.98
CHKB-CPT1BH3BT56 ANKRD23-203ENST00000418232 2156 ntAPPRIS P1 TSL 1 (best) BASIC8.93□□□□□ -0.98
CHKB-CPT1BH3BT56 BIVM-ERCC5-204ENST00000639132 5195 ntAPPRIS ALT2 TSL 5 BASIC8.93□□□□□ -0.98
CHKB-CPT1BH3BT56 PRMT7-202ENST00000441236 2204 ntAPPRIS P1 TSL 1 (best) BASIC8.93□□□□□ -0.98
CHKB-CPT1BH3BT56 SYDE1-203ENST00000600252 3832 ntTSL 2 BASIC8.93□□□□□ -0.98
CHKB-CPT1BH3BT56 ATP13A2-203ENST00000452699 3981 ntAPPRIS ALT2 TSL 1 (best) BASIC8.93□□□□□ -0.98
CHKB-CPT1BH3BT56 C2-206ENST00000442278 2434 ntTSL 2 BASIC8.93□□□□□ -0.98
CHKB-CPT1BH3BT56 PRF1-201ENST00000373209 2492 ntAPPRIS P1 TSL 1 (best) BASIC8.93□□□□□ -0.98
CHKB-CPT1BH3BT56 SLC35C2-203ENST00000372227 2505 ntAPPRIS P1 TSL 1 (best) BASIC8.93□□□□□ -0.98
CHKB-CPT1BH3BT56 DFNA5-201ENST00000342947 2590 ntAPPRIS P1 TSL 1 (best) BASIC8.93□□□□□ -0.98
CHKB-CPT1BH3BT56 MRVI1-204ENST00000527509 2686 ntTSL 1 (best) BASIC8.93□□□□□ -0.98
CHKB-CPT1BH3BT56 TRAPPC9-201ENST00000389328 4474 ntTSL 2 BASIC8.93□□□□□ -0.98
CHKB-CPT1BH3BT56 BAIAP2-AS1-202ENST00000577066 4465 ntTSL 2 BASIC8.93□□□□□ -0.98
CHKB-CPT1BH3BT56 TMCC2-201ENST00000329800 2818 ntTSL 2 BASIC8.93□□□□□ -0.98
CHKB-CPT1BH3BT56 PRKD2-216ENST00000601806 2906 ntAPPRIS ALT2 TSL 5 BASIC8.93□□□□□ -0.98
CHKB-CPT1BH3BT56 ARHGAP4-201ENST00000350060 3235 ntAPPRIS P3 TSL 1 (best) BASIC8.93□□□□□ -0.98
CHKB-CPT1BH3BT56 SEMA3F-202ENST00000413852 3212 ntTSL 1 (best) BASIC8.93□□□□□ -0.98
CHKB-CPT1BH3BT56 SEPT2-208ENST00000407971 3267 ntTSL 5 BASIC8.93□□□□□ -0.98
CHKB-CPT1BH3BT56 NMNAT2-201ENST00000287713 5663 ntAPPRIS P1 TSL 1 (best) BASIC8.93□□□□□ -0.98
CHKB-CPT1BH3BT56 MGST3-205ENST00000367889 1015 ntAPPRIS P1 TSL 1 (best) BASIC8.93□□□□□ -0.98
CHKB-CPT1BH3BT56 SDCBP2-203ENST00000381808 1261 ntTSL 1 (best) BASIC8.93□□□□□ -0.98
CHKB-CPT1BH3BT56 CHCHD10-201ENST00000401675 691 ntAPPRIS P1 TSL 5 BASIC8.93□□□□□ -0.98
CHKB-CPT1BH3BT56 LINC01167-201ENST00000423232 604 ntTSL 3 BASIC8.93□□□□□ -0.98
CHKB-CPT1BH3BT56 ELP6-205ENST00000439305 880 ntTSL 2 BASIC8.93□□□□□ -0.98
CHKB-CPT1BH3BT56 DDX43P3-201ENST00000441064 443 ntBASIC8.93□□□□□ -0.98
CHKB-CPT1BH3BT56 SUMF1-205ENST00000458465 1102 ntTSL 2 BASIC8.93□□□□□ -0.98
CHKB-CPT1BH3BT56 AL442663.3-201ENST00000554737 1000 ntTSL 3 BASIC8.93□□□□□ -0.98
CHKB-CPT1BH3BT56 AC010999.2-201ENST00000621974 596 ntTSL 2 BASIC8.93□□□□□ -0.98
CHKB-CPT1BH3BT56 SCFD2-204ENST00000611795 1320 ntTSL 5 BASIC8.93□□□□□ -0.98
CHKB-CPT1BH3BT56 STIM1-201ENST00000300737 4038 ntAPPRIS P1 TSL 1 (best) BASIC8.93□□□□□ -0.98
CHKB-CPT1BH3BT56 KHDC1-202ENST00000370384 1430 ntAPPRIS ALT2 TSL 1 (best) BASIC8.93□□□□□ -0.98
CHKB-CPT1BH3BT56 LINC01311-201ENST00000565162 1445 ntBASIC8.93□□□□□ -0.98
CHKB-CPT1BH3BT56 NAP1L1-201ENST00000261182 4441 ntAPPRIS P1 TSL 1 (best) BASIC8.93□□□□□ -0.98
CHKB-CPT1BH3BT56 KRT8P41-201ENST00000533985 1514 ntBASIC8.93□□□□□ -0.98
Retrieved 100 of 98,524 protein–RNA pairs in 58.5 ms