Protein–RNA interactions for Protein: Q9Y2L9

LRCH1, Leucine-rich repeat and calponin homology domain-containing protein 1, humanhuman

Predictions only

Length 728 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LRCH1Q9Y2L9 PRMT7-202ENST00000441236 2204 ntAPPRIS P1 TSL 1 (best) BASIC15.46■□□□□ 0.07
LRCH1Q9Y2L9 FAM47E-STBD1-204ENST00000515604 3029 ntAPPRIS P2 TSL 2 BASIC15.46■□□□□ 0.07
LRCH1Q9Y2L9 PTGDS-202ENST00000371625 807 ntAPPRIS P1 TSL 1 (best) BASIC15.46■□□□□ 0.07
LRCH1Q9Y2L9 AC003075.1-204ENST00000433005 540 ntTSL 2 BASIC15.46■□□□□ 0.07
LRCH1Q9Y2L9 SGO1-208ENST00000437051 1187 ntAPPRIS ALT2 TSL 1 (best) BASIC15.46■□□□□ 0.07
LRCH1Q9Y2L9 KRT18P38-201ENST00000449496 1282 ntBASIC15.46■□□□□ 0.07
LRCH1Q9Y2L9 DGUOK-AS1-203ENST00000453103 601 ntTSL 3 BASIC15.46■□□□□ 0.07
LRCH1Q9Y2L9 RASA4DP-201ENST00000460726 1199 ntBASIC15.46■□□□□ 0.07
LRCH1Q9Y2L9 RBPMS-AS1-202ENST00000519753 1031 ntTSL 5 BASIC15.46■□□□□ 0.07
LRCH1Q9Y2L9 LINC00599-204ENST00000521242 716 ntTSL 3 BASIC15.46■□□□□ 0.07
LRCH1Q9Y2L9 AP006284.1-202ENST00000527113 527 ntTSL 4 BASIC15.46■□□□□ 0.07
LRCH1Q9Y2L9 AC127526.4-201ENST00000527970 983 ntTSL 3 BASIC15.46■□□□□ 0.07
LRCH1Q9Y2L9 AC020558.2-201ENST00000582325 795 ntTSL 3 BASIC15.46■□□□□ 0.07
LRCH1Q9Y2L9 AC034238.1-212ENST00000596137 723 ntTSL 5 BASIC15.46■□□□□ 0.07
LRCH1Q9Y2L9 FGF14-AS2-201ENST00000606448 1074 ntBASIC15.46■□□□□ 0.07
LRCH1Q9Y2L9 GXYLT1P4-201ENST00000613576 1192 ntBASIC15.46■□□□□ 0.07
LRCH1Q9Y2L9 WDR25-204ENST00000554175 2055 ntTSL 1 (best) BASIC15.46■□□□□ 0.07
LRCH1Q9Y2L9 AL031731.1-201ENST00000642131 2094 ntBASIC15.46■□□□□ 0.07
LRCH1Q9Y2L9 AC079336.5-201ENST00000581360 2480 ntTSL 2 BASIC15.46■□□□□ 0.07
LRCH1Q9Y2L9 CCDC130-204ENST00000586600 1922 ntAPPRIS P1 TSL 5 BASIC15.46■□□□□ 0.07
LRCH1Q9Y2L9 ALG12-201ENST00000330817 5350 ntAPPRIS P1 TSL 1 (best) BASIC15.46■□□□□ 0.07
LRCH1Q9Y2L9 GTF2H2C-210ENST00000510979 2952 ntAPPRIS P1 TSL 1 (best) BASIC15.46■□□□□ 0.07
LRCH1Q9Y2L9 AP1M2-207ENST00000590923 1757 ntAPPRIS ALT1 TSL 1 (best) BASIC15.46■□□□□ 0.07
LRCH1Q9Y2L9 CRELD2-201ENST00000328268 1357 ntAPPRIS P3 TSL 1 (best) BASIC15.46■□□□□ 0.07
LRCH1Q9Y2L9 TRMT1-203ENST00000437766 2263 ntAPPRIS P3 TSL 1 (best) BASIC15.46■□□□□ 0.06
LRCH1Q9Y2L9 CCDC136-212ENST00000487361 2268 ntAPPRIS ALT2 TSL 5 BASIC15.46■□□□□ 0.06
LRCH1Q9Y2L9 SPOCK3-210ENST00000506886 2947 ntAPPRIS ALT2 TSL 5 BASIC15.46■□□□□ 0.06
LRCH1Q9Y2L9 PAK1-210ENST00000528203 1878 ntTSL 2 BASIC15.46■□□□□ 0.06
LRCH1Q9Y2L9 AC068831.3-201ENST00000553321 1858 ntTSL 2 BASIC15.46■□□□□ 0.06
LRCH1Q9Y2L9 RAB3IL1-201ENST00000301773 2125 ntTSL 1 (best) BASIC15.46■□□□□ 0.06
LRCH1Q9Y2L9 PGBD2-201ENST00000329291 2136 ntAPPRIS P4 TSL 1 (best) BASIC15.46■□□□□ 0.06
LRCH1Q9Y2L9 AL354714.1-201ENST00000356006 2136 ntTSL 1 (best) BASIC15.46■□□□□ 0.06
LRCH1Q9Y2L9 TMEM25-202ENST00000354064 1965 ntTSL 2 BASIC15.45■□□□□ 0.06
LRCH1Q9Y2L9 SIGLEC9-202ENST00000440804 1960 ntAPPRIS ALT2 TSL 2 BASIC15.45■□□□□ 0.06
LRCH1Q9Y2L9 PKP4-AS1-203ENST00000629904 1951 ntTSL 5 BASIC15.45■□□□□ 0.06
LRCH1Q9Y2L9 FYN-202ENST00000354650 3628 ntAPPRIS P4 TSL 1 (best) BASIC15.45■□□□□ 0.06
LRCH1Q9Y2L9 ACSL1-202ENST00000454703 3636 ntTSL 5 BASIC15.45■□□□□ 0.06
LRCH1Q9Y2L9 OXTR-201ENST00000316793 4364 ntAPPRIS P1 TSL 1 (best) BASIC15.45■□□□□ 0.06
LRCH1Q9Y2L9 MAPT-201ENST00000262410 6762 ntAPPRIS P4 TSL 1 (best) BASIC15.45■□□□□ 0.06
LRCH1Q9Y2L9 ALDH3B1-206ENST00000615463 1300 ntTSL 1 (best) BASIC15.45■□□□□ 0.06
LRCH1Q9Y2L9 C2orf27B-201ENST00000623129 1325 ntTSL 1 (best) BASIC15.45■□□□□ 0.06
LRCH1Q9Y2L9 TMEM30B-202ENST00000555868 4471 ntAPPRIS P1 BASIC15.45■□□□□ 0.06
LRCH1Q9Y2L9 WDR88-202ENST00000361680 1835 ntAPPRIS ALT2 TSL 1 (best) BASIC15.45■□□□□ 0.06
LRCH1Q9Y2L9 AMMECR1-203ENST00000372059 3052 ntTSL 1 (best) BASIC15.45■□□□□ 0.06
LRCH1Q9Y2L9 ABLIM3-206ENST00000506113 4569 ntAPPRIS P1 TSL 1 (best) BASIC15.45■□□□□ 0.06
LRCH1Q9Y2L9 TFE3-201ENST00000315869 3415 ntAPPRIS P1 TSL 1 (best) BASIC15.45■□□□□ 0.06
LRCH1Q9Y2L9 COX10-AS1-202ENST00000449363 1944 ntTSL 2 BASIC15.45■□□□□ 0.06
LRCH1Q9Y2L9 SLC4A7-212ENST00000446700 4000 ntTSL 1 (best) BASIC15.45■□□□□ 0.06
LRCH1Q9Y2L9 PAK4-208ENST00000599386 5735 ntTSL 1 (best) BASIC15.45■□□□□ 0.06
LRCH1Q9Y2L9 PDCD5-203ENST00000419343 1799 ntTSL 2 BASIC15.45■□□□□ 0.06
LRCH1Q9Y2L9 SMARCA4-214ENST00000589677 5181 ntAPPRIS ALT1 TSL 5 BASIC15.45■□□□□ 0.06
LRCH1Q9Y2L9 HIST2H2AB-201ENST00000331128 393 ntAPPRIS P1 BASIC15.45■□□□□ 0.06
LRCH1Q9Y2L9 SAPCD2-201ENST00000409687 3848 ntAPPRIS P1 TSL 1 (best) BASIC15.45■□□□□ 0.06
LRCH1Q9Y2L9 SPDYE15P-201ENST00000424157 909 ntBASIC15.45■□□□□ 0.06
LRCH1Q9Y2L9 MOGAT1-201ENST00000446656 1048 ntAPPRIS P1 TSL 5 BASIC15.45■□□□□ 0.06
LRCH1Q9Y2L9 LY6E-213ENST00000522528 606 ntTSL 3 BASIC15.45■□□□□ 0.06
LRCH1Q9Y2L9 CD320-202ENST00000537716 1119 ntTSL 2 BASIC15.45■□□□□ 0.06
LRCH1Q9Y2L9 AKTIP-212ENST00000570004 1162 ntAPPRIS P3 TSL 1 (best) BASIC15.45■□□□□ 0.06
LRCH1Q9Y2L9 PLXNB1-202ENST00000358536 7308 ntAPPRIS P2 TSL 1 (best) BASIC15.45■□□□□ 0.06
LRCH1Q9Y2L9 UBA1-202ENST00000377269 2497 ntTSL 2 BASIC15.45■□□□□ 0.06
LRCH1Q9Y2L9 AJ011931.1-201ENST00000618749 2492 ntBASIC15.45■□□□□ 0.06
LRCH1Q9Y2L9 MAP3K8-201ENST00000263056 3096 ntAPPRIS P1 TSL 1 (best) BASIC15.45■□□□□ 0.06
LRCH1Q9Y2L9 ELFN2-201ENST00000402918 8361 ntAPPRIS P1 TSL 4 BASIC15.45■□□□□ 0.06
LRCH1Q9Y2L9 CCNF-202ENST00000397066 4283 ntAPPRIS P1 TSL 1 (best) BASIC15.45■□□□□ 0.06
LRCH1Q9Y2L9 CCDC32-201ENST00000358005 1704 ntAPPRIS P1 TSL 2 BASIC15.45■□□□□ 0.06
LRCH1Q9Y2L9 CDT1-201ENST00000301019 3240 ntAPPRIS P1 TSL 1 (best) BASIC15.45■□□□□ 0.06
LRCH1Q9Y2L9 NFATC1-207ENST00000545796 3558 ntTSL 2 BASIC15.45■□□□□ 0.06
LRCH1Q9Y2L9 VPS36-207ENST00000611132 4607 ntTSL 1 (best) BASIC15.45■□□□□ 0.06
LRCH1Q9Y2L9 BLK-201ENST00000259089 2606 ntAPPRIS P1 TSL 1 (best) BASIC15.45■□□□□ 0.06
LRCH1Q9Y2L9 PRDX3-201ENST00000298510 1591 ntAPPRIS P1 TSL 1 (best) BASIC15.45■□□□□ 0.06
LRCH1Q9Y2L9 RPRD1A-209ENST00000590898 1945 ntTSL 1 (best) BASIC15.45■□□□□ 0.06
LRCH1Q9Y2L9 APBB1-224ENST00000621678 1907 ntTSL 5 BASIC15.45■□□□□ 0.06
LRCH1Q9Y2L9 RBM26-203ENST00000438737 4132 ntTSL 5 BASIC15.45■□□□□ 0.06
LRCH1Q9Y2L9 ECE1-201ENST00000264205 2381 ntAPPRIS P4 TSL 1 (best) BASIC15.44■□□□□ 0.06
LRCH1Q9Y2L9 SEC63-201ENST00000369002 6411 ntAPPRIS P1 TSL 1 (best) BASIC15.44■□□□□ 0.06
LRCH1Q9Y2L9 WDR27-201ENST00000423258 2465 ntAPPRIS ALT2 TSL 1 (best) BASIC15.44■□□□□ 0.06
LRCH1Q9Y2L9 MAP2K7-201ENST00000397979 3361 ntAPPRIS P3 TSL 1 (best) BASIC15.44■□□□□ 0.06
LRCH1Q9Y2L9 NRBF2-201ENST00000277746 1853 ntAPPRIS P1 TSL 1 (best) BASIC15.44■□□□□ 0.06
LRCH1Q9Y2L9 AL122018.1-201ENST00000446607 2310 ntBASIC15.44■□□□□ 0.06
LRCH1Q9Y2L9 C16orf58-211ENST00000570164 2783 ntAPPRIS ALT1 TSL 5 BASIC15.44■□□□□ 0.06
LRCH1Q9Y2L9 SLC2A11-203ENST00000345044 3219 ntAPPRIS P1 TSL 1 (best) BASIC15.44■□□□□ 0.06
LRCH1Q9Y2L9 REXO1L1P-202ENST00000608646 1974 ntBASIC15.44■□□□□ 0.06
LRCH1Q9Y2L9 USP28-214ENST00000545540 3431 ntTSL 2 BASIC15.44■□□□□ 0.06
LRCH1Q9Y2L9 BAIAP2-220ENST00000575712 2512 ntAPPRIS ALT2 TSL 1 (best) BASIC15.44■□□□□ 0.06
LRCH1Q9Y2L9 UBE2D1-204ENST00000615793 2621 ntTSL 2 BASIC15.44■□□□□ 0.06
LRCH1Q9Y2L9 IGLL1-201ENST00000249053 716 ntTSL 1 (best) BASIC15.44■□□□□ 0.06
LRCH1Q9Y2L9 UBE2C-204ENST00000356455 850 ntAPPRIS P1 TSL 1 (best) BASIC15.44■□□□□ 0.06
LRCH1Q9Y2L9 MADCAM1-203ENST00000382683 603 ntTSL 1 (best) BASIC15.44■□□□□ 0.06
LRCH1Q9Y2L9 ISCU-202ENST00000392807 1069 ntTSL 1 (best) BASIC15.44■□□□□ 0.06
LRCH1Q9Y2L9 ISCU-203ENST00000431221 799 ntTSL 2 BASIC15.44■□□□□ 0.06
LRCH1Q9Y2L9 AC087623.2-201ENST00000528407 534 ntTSL 4 BASIC15.44■□□□□ 0.06
LRCH1Q9Y2L9 SSSCA1-206ENST00000531405 879 ntTSL 2 BASIC15.44■□□□□ 0.06
LRCH1Q9Y2L9 EEF1D-243ENST00000532400 419 ntTSL 3 BASIC15.44■□□□□ 0.06
LRCH1Q9Y2L9 AC027682.5-201ENST00000567122 530 ntTSL 3 BASIC15.44■□□□□ 0.06
LRCH1Q9Y2L9 SLF2-205ENST00000609386 891 ntAPPRIS ALT2 BASIC15.44■□□□□ 0.06
LRCH1Q9Y2L9 AP000550.4-202ENST00000639755 178 ntBASIC15.44■□□□□ 0.06
LRCH1Q9Y2L9 NDUFAB1-201ENST00000007516 717 ntAPPRIS P1 TSL 1 (best) BASIC15.44■□□□□ 0.06
LRCH1Q9Y2L9 RNF113B-201ENST00000267291 1376 ntAPPRIS P1 TSL 1 (best) BASIC15.44■□□□□ 0.06
LRCH1Q9Y2L9 ABCG1-203ENST00000361802 3034 ntAPPRIS P3 TSL 1 (best) BASIC15.44■□□□□ 0.06
LRCH1Q9Y2L9 CHRNB4-202ENST00000412074 1355 ntTSL 1 (best) BASIC15.44■□□□□ 0.06
Retrieved 100 of 98,524 protein–RNA pairs in 42.5 ms