Protein–RNA interactions for Protein: Q9UH73

EBF1, Transcription factor COE1, humanhuman

Predictions only

Length 591 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
EBF1Q9UH73 EPB41-205ENST00000373797 2402 ntTSL 1 (best) BASIC16.49■□□□□ 0.23
EBF1Q9UH73 GPR158-AS1-201ENST00000449643 2433 ntTSL 2 BASIC16.49■□□□□ 0.23
EBF1Q9UH73 RAPGEFL1-212ENST00000620260 3855 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
EBF1Q9UH73 CACNA2D2-201ENST00000266039 5476 ntAPPRIS ALT2 TSL 1 (best) BASIC16.49■□□□□ 0.23
EBF1Q9UH73 PCDHA6-202ENST00000527624 2231 ntTSL 1 (best) BASIC16.49■□□□□ 0.23
EBF1Q9UH73 PCSK5-201ENST00000376752 5756 ntAPPRIS P3 TSL 1 (best) BASIC16.49■□□□□ 0.23
EBF1Q9UH73 SYNRG-222ENST00000614941 3406 ntTSL 1 (best) BASIC16.48■□□□□ 0.23
EBF1Q9UH73 LETM2-202ENST00000379957 1873 ntAPPRIS ALT2 TSL 5 BASIC16.48■□□□□ 0.23
EBF1Q9UH73 IRF3-217ENST00000597198 1741 ntAPPRIS P1 TSL 2 BASIC16.48■□□□□ 0.23
EBF1Q9UH73 PDAP1-201ENST00000350498 2546 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
EBF1Q9UH73 PRICKLE1-211ENST00000639566 3341 ntAPPRIS P1 TSL 5 BASIC16.48■□□□□ 0.23
EBF1Q9UH73 MAP4K4-205ENST00000350878 7640 ntTSL 1 (best) BASIC16.48■□□□□ 0.23
EBF1Q9UH73 ATP6V0B-201ENST00000236067 944 ntTSL 2 BASIC16.48■□□□□ 0.23
EBF1Q9UH73 PXMP4-202ENST00000344022 989 ntTSL 2 BASIC16.48■□□□□ 0.23
EBF1Q9UH73 CBX7-202ENST00000401405 784 ntTSL 1 (best) BASIC16.48■□□□□ 0.23
EBF1Q9UH73 AL669831.5-201ENST00000434264 844 ntTSL 5 BASIC16.48■□□□□ 0.23
EBF1Q9UH73 AC093459.1-202ENST00000438963 768 ntTSL 3 BASIC16.48■□□□□ 0.23
EBF1Q9UH73 AC099552.3-201ENST00000454149 367 ntTSL 3 BASIC16.48■□□□□ 0.23
EBF1Q9UH73 ATP6V0B-211ENST00000498664 825 ntTSL 2 BASIC16.48■□□□□ 0.23
EBF1Q9UH73 AKIP1-211ENST00000534506 576 ntTSL 3 BASIC16.48■□□□□ 0.23
EBF1Q9UH73 OBP2A-206ENST00000539850 914 ntAPPRIS P1 TSL 5 BASIC16.48■□□□□ 0.23
EBF1Q9UH73 HILS1-202ENST00000545329 423 ntBASIC16.48■□□□□ 0.23
EBF1Q9UH73 TMEM5-AS1-201ENST00000546214 563 ntTSL 4 BASIC16.48■□□□□ 0.23
EBF1Q9UH73 ATF7-204ENST00000548118 774 ntTSL 1 (best) BASIC16.48■□□□□ 0.23
EBF1Q9UH73 AC010336.2-201ENST00000564226 506 ntBASIC16.48■□□□□ 0.23
EBF1Q9UH73 MRPS30-202ENST00000507110 1678 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
EBF1Q9UH73 SHISA5-219ENST00000612611 1677 ntTSL 5 BASIC16.48■□□□□ 0.23
EBF1Q9UH73 ZDHHC9-202ENST00000371064 2473 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
EBF1Q9UH73 AP001122.1-202ENST00000501648 1916 ntTSL 2 BASIC16.48■□□□□ 0.23
EBF1Q9UH73 SPG11-215ENST00000559193 2579 ntAPPRIS ALT2 TSL 1 (best) BASIC16.48■□□□□ 0.23
EBF1Q9UH73 INHBB-201ENST00000295228 3204 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
EBF1Q9UH73 DYDC2-202ENST00000372197 2022 ntAPPRIS P3 TSL 1 (best) BASIC16.48■□□□□ 0.23
EBF1Q9UH73 AC026691.1-201ENST00000602502 2017 ntBASIC16.48■□□□□ 0.23
EBF1Q9UH73 ACOT7-204ENST00000377855 1614 ntAPPRIS P4 TSL 1 (best) BASIC16.48■□□□□ 0.23
EBF1Q9UH73 POC1A-201ENST00000296484 1898 ntAPPRIS P3 TSL 1 (best) BASIC16.48■□□□□ 0.23
EBF1Q9UH73 BNIP2-212ENST00000607373 1851 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
EBF1Q9UH73 CTNNBIP1-203ENST00000377263 3000 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
EBF1Q9UH73 PLCH2-203ENST00000378486 4837 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
EBF1Q9UH73 PLCH2-204ENST00000419816 4837 ntAPPRIS P1 TSL 5 BASIC16.48■□□□□ 0.23
EBF1Q9UH73 GGT6-203ENST00000573591 1730 ntTSL 4 BASIC16.48■□□□□ 0.23
EBF1Q9UH73 PRMT1-202ENST00000454376 1327 ntTSL 1 (best) BASIC16.47■□□□□ 0.23
EBF1Q9UH73 PGAP3-211ENST00000619169 2094 ntTSL 2 BASIC16.47■□□□□ 0.23
EBF1Q9UH73 YTHDF1-202ENST00000370339 3301 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
EBF1Q9UH73 PANK4-201ENST00000378466 2677 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
EBF1Q9UH73 PDXDC1-204ENST00000455313 2183 ntTSL 2 BASIC16.47■□□□□ 0.23
EBF1Q9UH73 LTBR-207ENST00000539925 1665 ntAPPRIS ALT2 TSL 2 BASIC16.47■□□□□ 0.23
EBF1Q9UH73 BANP-204ENST00000393208 2283 ntTSL 2 BASIC16.47■□□□□ 0.23
EBF1Q9UH73 RBM4-204ENST00000408993 1763 ntAPPRIS P1 TSL 5 BASIC16.47■□□□□ 0.23
EBF1Q9UH73 FAM135A-205ENST00000418814 6415 ntTSL 5 BASIC16.47■□□□□ 0.23
EBF1Q9UH73 GATA4-206ENST00000528712 2614 ntTSL 2 BASIC16.47■□□□□ 0.23
EBF1Q9UH73 NDUFB7-201ENST00000215565 531 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
EBF1Q9UH73 EBI3-201ENST00000221847 1186 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
EBF1Q9UH73 TMEM52-201ENST00000310991 929 ntAPPRIS P2 TSL 1 (best) BASIC16.47■□□□□ 0.23
EBF1Q9UH73 CIDEA-201ENST00000320477 828 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
EBF1Q9UH73 SPDYE19P-201ENST00000338590 713 ntBASIC16.47■□□□□ 0.23
EBF1Q9UH73 CCL25-203ENST00000390669 924 ntAPPRIS P3 TSL 1 (best) BASIC16.47■□□□□ 0.23
EBF1Q9UH73 MARK3-204ENST00000416682 2969 ntTSL 1 (best) BASIC16.47■□□□□ 0.23
EBF1Q9UH73 AC114501.2-201ENST00000439631 535 ntBASIC16.47■□□□□ 0.23
EBF1Q9UH73 DNAJC19-208ENST00000486355 828 ntTSL 2 BASIC16.47■□□□□ 0.23
EBF1Q9UH73 DNAJC19-209ENST00000491873 769 ntTSL 2 BASIC16.47■□□□□ 0.23
EBF1Q9UH73 TMEM161B-AS1-212ENST00000513011 833 ntTSL 3 BASIC16.47■□□□□ 0.23
EBF1Q9UH73 NEIL2-207ENST00000528323 998 ntTSL 2 BASIC16.47■□□□□ 0.23
EBF1Q9UH73 AP001107.3-201ENST00000534065 544 ntTSL 4 BASIC16.47■□□□□ 0.23
EBF1Q9UH73 AC091544.3-201ENST00000556424 531 ntTSL 2 BASIC16.47■□□□□ 0.23
EBF1Q9UH73 AC105339.1-202ENST00000559535 1283 ntTSL 5 BASIC16.47■□□□□ 0.23
EBF1Q9UH73 HIST1H2AB-201ENST00000615868 393 ntAPPRIS P1 BASIC16.47■□□□□ 0.23
EBF1Q9UH73 FHL1-207ENST00000394155 2706 ntTSL 5 BASIC16.47■□□□□ 0.23
EBF1Q9UH73 B3GNT4-206ENST00000546192 2749 ntAPPRIS P1 TSL 2 BASIC16.47■□□□□ 0.23
EBF1Q9UH73 ALPPL2-201ENST00000295453 2493 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
EBF1Q9UH73 ITGB2-207ENST00000397854 2592 ntTSL 1 (best) BASIC16.47■□□□□ 0.23
EBF1Q9UH73 PCBP3-204ENST00000400309 1986 ntAPPRIS ALT2 TSL 5 BASIC16.47■□□□□ 0.23
EBF1Q9UH73 PRRC2A-201ENST00000376007 6861 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
EBF1Q9UH73 CXCL6-201ENST00000226317 1718 ntAPPRIS P2 TSL 1 (best) BASIC16.47■□□□□ 0.23
EBF1Q9UH73 AFMID-201ENST00000327898 1700 ntAPPRIS ALT2 TSL 1 (best) BASIC16.47■□□□□ 0.23
EBF1Q9UH73 AL132857.2-201ENST00000634305 1737 ntTSL 5 BASIC16.47■□□□□ 0.23
EBF1Q9UH73 ARVCF-204ENST00000406522 2682 ntTSL 5 BASIC16.47■□□□□ 0.23
EBF1Q9UH73 NECAB2-203ENST00000565691 2064 ntTSL 1 (best) BASIC16.47■□□□□ 0.23
EBF1Q9UH73 ALOX15-205ENST00000574640 2422 ntTSL 2 BASIC16.47■□□□□ 0.23
EBF1Q9UH73 DNAJC7-201ENST00000316603 1468 ntTSL 1 (best) BASIC16.47■□□□□ 0.23
EBF1Q9UH73 AL603756.1-201ENST00000606511 2163 ntBASIC16.47■□□□□ 0.23
EBF1Q9UH73 AC005329.1-201ENST00000501448 3571 ntTSL 2 BASIC16.47■□□□□ 0.23
EBF1Q9UH73 CCDC130-204ENST00000586600 1922 ntAPPRIS P1 TSL 5 BASIC16.47■□□□□ 0.23
EBF1Q9UH73 MPP1-202ENST00000369534 2042 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
EBF1Q9UH73 MELTF-201ENST00000296350 3963 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
EBF1Q9UH73 LINC01301-205ENST00000531654 1347 ntTSL 5 BASIC16.46■□□□□ 0.23
EBF1Q9UH73 ITGB4-201ENST00000200181 5919 ntTSL 1 (best) BASIC16.46■□□□□ 0.23
EBF1Q9UH73 KLHDC8A-205ENST00000539253 2931 ntAPPRIS P1 TSL 5 BASIC16.46■□□□□ 0.23
EBF1Q9UH73 UBE2O-201ENST00000319380 5436 ntAPPRIS P2 TSL 1 (best) BASIC16.46■□□□□ 0.23
EBF1Q9UH73 NCAPD2-201ENST00000315579 5548 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
EBF1Q9UH73 DRC7-201ENST00000336825 2680 ntAPPRIS ALT2 TSL 2 BASIC16.46■□□□□ 0.23
EBF1Q9UH73 RAD51D-218ENST00000590016 1528 ntTSL 2 BASIC16.46■□□□□ 0.23
EBF1Q9UH73 IQCE-212ENST00000476665 2400 ntAPPRIS ALT2 TSL 2 BASIC16.46■□□□□ 0.23
EBF1Q9UH73 INTS14-209ENST00000567744 2419 ntTSL 2 BASIC16.46■□□□□ 0.23
EBF1Q9UH73 ABCB10-201ENST00000344517 3857 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
EBF1Q9UH73 ZBTB4-202ENST00000380599 5866 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
EBF1Q9UH73 MUTYH-201ENST00000354383 1744 ntAPPRIS P4 TSL 1 (best) BASIC16.46■□□□□ 0.23
EBF1Q9UH73 CCDC84-201ENST00000334418 1202 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
EBF1Q9UH73 ZUFSP-201ENST00000368573 1225 ntTSL 5 BASIC16.46■□□□□ 0.23
EBF1Q9UH73 C11orf88-202ENST00000375618 712 ntAPPRIS ALT2 TSL 1 (best) BASIC16.46■□□□□ 0.23
EBF1Q9UH73 AQP7-204ENST00000379506 1062 ntTSL 2 BASIC16.46■□□□□ 0.23
Retrieved 100 of 98,524 protein–RNA pairs in 85 ms