Protein–RNA interactions for Protein: Q9BWW4

SSBP3, Single-stranded DNA-binding protein 3, humanhuman

Predicted RBP Predictions only

Length 388 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SSBP3Q9BWW4 KRT12-201ENST00000251643 1867 ntAPPRIS P1 TSL 1 (best) BASIC13.54□□□□□ -0.24
SSBP3Q9BWW4 TMC4-209ENST00000617472 2413 ntAPPRIS ALT2 TSL 1 (best) BASIC13.54□□□□□ -0.24
SSBP3Q9BWW4 NFATC4-211ENST00000554344 2955 ntAPPRIS ALT2 TSL 1 (best) BASIC13.54□□□□□ -0.24
SSBP3Q9BWW4 PRRT4-201ENST00000446477 3544 ntAPPRIS P1 TSL 5 BASIC13.54□□□□□ -0.24
SSBP3Q9BWW4 SPINT1-202ENST00000562057 2456 ntAPPRIS ALT2 TSL 1 (best) BASIC13.54□□□□□ -0.24
SSBP3Q9BWW4 FO538757.1-201ENST00000623083 1397 ntBASIC13.54□□□□□ -0.24
SSBP3Q9BWW4 MOB3B-201ENST00000262244 6454 ntAPPRIS P1 TSL 1 (best) BASIC13.54□□□□□ -0.24
SSBP3Q9BWW4 HAPLN3-201ENST00000359595 1980 ntAPPRIS P1 TSL 1 (best) BASIC13.54□□□□□ -0.24
SSBP3Q9BWW4 DPY19L2P4-202ENST00000497063 2018 ntTSL 1 (best) BASIC13.54□□□□□ -0.24
SSBP3Q9BWW4 FHL2-201ENST00000322142 1462 ntAPPRIS P1 TSL 1 (best) BASIC13.54□□□□□ -0.24
SSBP3Q9BWW4 IL3RA-202ENST00000381469 1476 ntTSL 5 BASIC13.54□□□□□ -0.24
SSBP3Q9BWW4 MRPS21-201ENST00000581066 1462 ntAPPRIS P1 TSL 1 (best) BASIC13.54□□□□□ -0.24
SSBP3Q9BWW4 LYPD5-202ENST00000414615 2137 ntAPPRIS P3 TSL 2 BASIC13.54□□□□□ -0.24
SSBP3Q9BWW4 AC021148.1-201ENST00000513652 1532 ntTSL 1 (best) BASIC13.54□□□□□ -0.24
SSBP3Q9BWW4 ZCCHC3-201ENST00000500893 3354 ntAPPRIS P1 BASIC13.54□□□□□ -0.24
SSBP3Q9BWW4 ANKRD23-203ENST00000418232 2156 ntAPPRIS P1 TSL 1 (best) BASIC13.54□□□□□ -0.24
SSBP3Q9BWW4 AHRR-203ENST00000505113 2173 ntAPPRIS ALT2 TSL 1 (best) BASIC13.54□□□□□ -0.24
SSBP3Q9BWW4 HCLS1-202ENST00000428394 1560 ntTSL 2 BASIC13.54□□□□□ -0.24
SSBP3Q9BWW4 PTPN11-201ENST00000351677 6101 ntAPPRIS P3 TSL 1 (best) BASIC13.53□□□□□ -0.24
SSBP3Q9BWW4 FLJ16779-201ENST00000612722 7638 ntBASIC13.53□□□□□ -0.24
SSBP3Q9BWW4 GOLGA2P3Y-201ENST00000416946 1653 ntBASIC13.53□□□□□ -0.24
SSBP3Q9BWW4 CAMTA1-201ENST00000303635 8444 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
SSBP3Q9BWW4 AC005622.1-201ENST00000636801 1703 ntBASIC13.53□□□□□ -0.24
SSBP3Q9BWW4 DYSF-207ENST00000409762 6727 ntAPPRIS ALT2 TSL 1 (best) BASIC13.53□□□□□ -0.24
SSBP3Q9BWW4 DYSF-211ENST00000429174 6739 ntAPPRIS ALT2 TSL 1 (best) BASIC13.53□□□□□ -0.24
SSBP3Q9BWW4 POLI-208ENST00000579534 6133 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
SSBP3Q9BWW4 LRP10-201ENST00000359591 6886 ntAPPRIS P2 TSL 1 (best) BASIC13.53□□□□□ -0.24
SSBP3Q9BWW4 DYNC1LI1-204ENST00000432458 1827 ntTSL 2 BASIC13.53□□□□□ -0.24
SSBP3Q9BWW4 MEIS3-206ENST00000559524 1828 ntAPPRIS P3 TSL 2 BASIC13.53□□□□□ -0.24
SSBP3Q9BWW4 PTHLH-201ENST00000201015 1872 ntAPPRIS P3 TSL 3 BASIC13.53□□□□□ -0.24
SSBP3Q9BWW4 GATA3-201ENST00000346208 2654 ntAPPRIS P3 TSL 1 (best) BASIC13.53□□□□□ -0.24
SSBP3Q9BWW4 VPS54-201ENST00000272322 3463 ntAPPRIS P3 TSL 5 BASIC13.53□□□□□ -0.24
SSBP3Q9BWW4 UNC5D-203ENST00000416672 3532 ntAPPRIS ALT2 TSL 5 BASIC13.53□□□□□ -0.24
SSBP3Q9BWW4 CTCFL-215ENST00000608158 1984 ntTSL 1 (best) BASIC13.53□□□□□ -0.24
SSBP3Q9BWW4 ACTRT3-201ENST00000330368 2005 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
SSBP3Q9BWW4 CCDC187-205ENST00000638797 10126 ntAPPRIS ALT2 TSL 5 BASIC13.53□□□□□ -0.24
SSBP3Q9BWW4 PGAP3-211ENST00000619169 2094 ntTSL 2 BASIC13.53□□□□□ -0.24
SSBP3Q9BWW4 ROBO3-201ENST00000397801 4569 ntAPPRIS P2 TSL 1 (best) BASIC13.53□□□□□ -0.24
SSBP3Q9BWW4 ROBO3-220ENST00000538940 4551 ntAPPRIS ALT2 TSL 5 BASIC13.53□□□□□ -0.24
SSBP3Q9BWW4 GPHB5-201ENST00000314140 393 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
SSBP3Q9BWW4 CCDC84-201ENST00000334418 1202 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
SSBP3Q9BWW4 SNHG17-203ENST00000417578 880 ntTSL 2 BASIC13.53□□□□□ -0.24
SSBP3Q9BWW4 WDR53-203ENST00000429115 683 ntTSL 2 BASIC13.53□□□□□ -0.24
SSBP3Q9BWW4 AL022068.1-202ENST00000432171 794 ntTSL 3 BASIC13.53□□□□□ -0.24
SSBP3Q9BWW4 CD28-203ENST00000458610 705 ntTSL 1 (best) BASIC13.53□□□□□ -0.24
SSBP3Q9BWW4 POU5F1P6-201ENST00000466990 990 ntBASIC13.53□□□□□ -0.24
SSBP3Q9BWW4 PTPRVP-202ENST00000490575 953 ntTSL 5 BASIC13.53□□□□□ -0.24
SSBP3Q9BWW4 AKIP1-211ENST00000534506 576 ntTSL 3 BASIC13.53□□□□□ -0.24
SSBP3Q9BWW4 NDUFA4L2-202ENST00000554503 1177 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
SSBP3Q9BWW4 NDUFAB1-205ENST00000570319 885 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
SSBP3Q9BWW4 RAB3D-202ENST00000589655 924 ntAPPRIS P1 TSL 2 BASIC13.53□□□□□ -0.24
SSBP3Q9BWW4 C19orf70-206ENST00000590389 769 ntTSL 3 BASIC13.53□□□□□ -0.24
SSBP3Q9BWW4 AL355974.2-201ENST00000614099 556 ntTSL 4 BASIC13.53□□□□□ -0.24
SSBP3Q9BWW4 AL355974.2-202ENST00000617298 936 ntTSL 3 BASIC13.53□□□□□ -0.24
SSBP3Q9BWW4 SIT1-204ENST00000618781 1317 ntAPPRIS ALT2 TSL 5 BASIC13.53□□□□□ -0.24
SSBP3Q9BWW4 RCAN3-202ENST00000374395 6802 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
SSBP3Q9BWW4 PSD-201ENST00000020673 4183 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
SSBP3Q9BWW4 WDR45-201ENST00000322995 1444 ntTSL 5 BASIC13.53□□□□□ -0.24
SSBP3Q9BWW4 CFAP43-203ENST00000369719 1434 ntTSL 2 BASIC13.53□□□□□ -0.24
SSBP3Q9BWW4 HSD17B7P2-202ENST00000494540 1401 ntTSL 1 (best) BASIC13.53□□□□□ -0.24
SSBP3Q9BWW4 SIGLEC7-201ENST00000305628 1469 ntTSL 1 (best) BASIC13.53□□□□□ -0.24
SSBP3Q9BWW4 NAP1L4-222ENST00000620138 2479 ntTSL 2 BASIC13.53□□□□□ -0.24
SSBP3Q9BWW4 PRPF40B-201ENST00000261897 3602 ntAPPRIS ALT2 TSL 1 (best) BASIC13.53□□□□□ -0.24
SSBP3Q9BWW4 CD14-202ENST00000401743 1648 ntAPPRIS P1 TSL 3 BASIC13.53□□□□□ -0.24
SSBP3Q9BWW4 BMP4-201ENST00000245451 1917 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.24
SSBP3Q9BWW4 EFNB3-201ENST00000226091 3222 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.24
SSBP3Q9BWW4 CLPTM1L-216ENST00000630539 2032 ntTSL 5 BASIC13.52□□□□□ -0.24
SSBP3Q9BWW4 KRT86-201ENST00000293525 2091 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.24
SSBP3Q9BWW4 TYSND1-201ENST00000287078 3644 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.24
SSBP3Q9BWW4 GSKIP-205ENST00000555181 2218 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.24
SSBP3Q9BWW4 SARDH-205ENST00000422262 2367 ntTSL 5 BASIC13.52□□□□□ -0.24
SSBP3Q9BWW4 PLPPR5-202ENST00000370188 4139 ntAPPRIS ALT1 TSL 1 (best) BASIC13.52□□□□□ -0.24
SSBP3Q9BWW4 LRRFIP1-201ENST00000244815 4370 ntAPPRIS P3 TSL 1 (best) BASIC13.52□□□□□ -0.24
SSBP3Q9BWW4 C7orf31-201ENST00000283905 2673 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.24
SSBP3Q9BWW4 PCIF1-201ENST00000372409 2747 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.24
SSBP3Q9BWW4 PABPC4-203ENST00000372858 2753 ntTSL 1 (best) BASIC13.52□□□□□ -0.24
SSBP3Q9BWW4 CYP2U1-201ENST00000332884 4944 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.24
SSBP3Q9BWW4 CCDC8-201ENST00000307522 3213 ntAPPRIS P1 BASIC13.52□□□□□ -0.24
SSBP3Q9BWW4 APLN-201ENST00000429967 3205 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.24
SSBP3Q9BWW4 TMEM57-202ENST00000399766 3294 ntTSL 1 (best) BASIC13.52□□□□□ -0.24
SSBP3Q9BWW4 RREB1-204ENST00000379938 8778 ntAPPRIS P3 TSL 1 (best) BASIC13.52□□□□□ -0.25
SSBP3Q9BWW4 CLEC1B-201ENST00000298527 952 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.25
SSBP3Q9BWW4 SNURF-201ENST00000338327 331 ntAPPRIS P1 TSL 5 BASIC13.52□□□□□ -0.25
SSBP3Q9BWW4 HDAC8-202ENST00000373556 704 ntTSL 2 BASIC13.52□□□□□ -0.25
SSBP3Q9BWW4 TAS2R41-201ENST00000408916 924 ntAPPRIS P1 BASIC13.52□□□□□ -0.25
SSBP3Q9BWW4 AL732437.1-201ENST00000442008 595 ntTSL 4 BASIC13.52□□□□□ -0.25
SSBP3Q9BWW4 LINC01983-203ENST00000444346 519 ntTSL 2 BASIC13.52□□□□□ -0.25
SSBP3Q9BWW4 MUSTN1-201ENST00000446157 721 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.25
SSBP3Q9BWW4 AC064807.1-203ENST00000520357 575 ntTSL 5 BASIC13.52□□□□□ -0.25
SSBP3Q9BWW4 SPCS2P1-201ENST00000561636 679 ntBASIC13.52□□□□□ -0.25
SSBP3Q9BWW4 HEXIM2-206ENST00000591576 1176 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.25
SSBP3Q9BWW4 COQ4-205ENST00000609948 956 ntTSL 2 BASIC13.52□□□□□ -0.25
SSBP3Q9BWW4 AL390754.1-201ENST00000619088 582 ntBASIC13.52□□□□□ -0.25
SSBP3Q9BWW4 AC073592.8-201ENST00000624126 511 ntBASIC13.52□□□□□ -0.25
SSBP3Q9BWW4 CLN3-246ENST00000636228 1224 ntTSL 1 (best) BASIC13.52□□□□□ -0.25
SSBP3Q9BWW4 VARS2-212ENST00000542001 4064 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.25
SSBP3Q9BWW4 NOL4L-210ENST00000616976 1376 ntTSL 5 BASIC13.52□□□□□ -0.25
SSBP3Q9BWW4 HEPN1-201ENST00000408930 1434 ntAPPRIS P1 BASIC13.52□□□□□ -0.25
SSBP3Q9BWW4 RIMS1-213ENST00000517960 4428 ntTSL 5 BASIC13.52□□□□□ -0.25
SSBP3Q9BWW4 RIMS1-215ENST00000520567 4442 ntTSL 5 BASIC13.52□□□□□ -0.25
Retrieved 100 of 98,524 protein–RNA pairs in 29.3 ms