Protein–RNA interactions for Protein: Q96DX7

TRIM44, Tripartite motif-containing protein 44, humanhuman

Predicted RBP Predictions only

Length 344 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM44Q96DX7 TMBIM4-202ENST00000358230 2952 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
TRIM44Q96DX7 AL359183.1-201ENST00000623796 2132 ntBASIC18.37■□□□□ 0.53
TRIM44Q96DX7 CA12-201ENST00000178638 6413 ntAPPRIS P4 TSL 1 (best) BASIC18.37■□□□□ 0.53
TRIM44Q96DX7 NMUR1-201ENST00000305141 3298 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
TRIM44Q96DX7 SAMD4A-213ENST00000631086 6677 ntTSL 5 BASIC18.37■□□□□ 0.53
TRIM44Q96DX7 ZNF541-203ENST00000391901 4580 ntAPPRIS P2 TSL 5 BASIC18.37■□□□□ 0.53
TRIM44Q96DX7 CELP-203ENST00000624767 2414 ntTSL 5 BASIC18.37■□□□□ 0.53
TRIM44Q96DX7 UBA5-202ENST00000356232 3705 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
TRIM44Q96DX7 PLLP-205ENST00000613167 7578 ntTSL 5 BASIC18.37■□□□□ 0.53
TRIM44Q96DX7 HAS3-201ENST00000219322 1163 ntTSL 1 (best) BASIC18.37■□□□□ 0.53
TRIM44Q96DX7 UPK3B-201ENST00000257632 1296 ntAPPRIS P5 TSL 2 BASIC18.37■□□□□ 0.53
TRIM44Q96DX7 UPK3B-203ENST00000394849 1041 ntAPPRIS ALT2 TSL 2 BASIC18.37■□□□□ 0.53
TRIM44Q96DX7 ANKRD54-204ENST00000411961 946 ntTSL 5 BASIC18.37■□□□□ 0.53
TRIM44Q96DX7 AC026271.2-201ENST00000428091 497 ntBASIC18.37■□□□□ 0.53
TRIM44Q96DX7 AC103564.2-201ENST00000432853 1299 ntBASIC18.37■□□□□ 0.53
TRIM44Q96DX7 AC009947.2-201ENST00000444014 672 ntBASIC18.37■□□□□ 0.53
TRIM44Q96DX7 RBM14-RBM4-203ENST00000500635 829 ntTSL 2 BASIC18.37■□□□□ 0.53
TRIM44Q96DX7 PPP1R14BP3-201ENST00000509033 445 ntBASIC18.37■□□□□ 0.53
TRIM44Q96DX7 AL157871.1-202ENST00000556458 478 ntTSL 5 BASIC18.37■□□□□ 0.53
TRIM44Q96DX7 Z97986.1-201ENST00000565879 476 ntTSL 5 BASIC18.37■□□□□ 0.53
TRIM44Q96DX7 CLN6-207ENST00000566347 981 ntTSL 1 (best) BASIC18.37■□□□□ 0.53
TRIM44Q96DX7 TGIF1-222ENST00000577543 729 ntTSL 3 BASIC18.37■□□□□ 0.53
TRIM44Q96DX7 MIMT1-202ENST00000599641 1290 ntTSL 1 (best) BASIC18.37■□□□□ 0.53
TRIM44Q96DX7 CALM2-201ENST00000272298 1302 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
TRIM44Q96DX7 ZBTB1-201ENST00000358738 4119 ntTSL 1 (best) BASIC18.37■□□□□ 0.53
TRIM44Q96DX7 FBXO21-202ENST00000427718 4138 ntTSL 1 (best) BASIC18.37■□□□□ 0.53
TRIM44Q96DX7 KDM2B-205ENST00000536437 2762 ntTSL 1 (best) BASIC18.37■□□□□ 0.53
TRIM44Q96DX7 PRSS30P-201ENST00000390681 2881 ntTSL 1 (best) BASIC18.37■□□□□ 0.53
TRIM44Q96DX7 MAPK14-202ENST00000229795 4319 ntAPPRIS ALT1 TSL 1 (best) BASIC18.37■□□□□ 0.53
TRIM44Q96DX7 BBS2-201ENST00000245157 2963 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
TRIM44Q96DX7 WIPI1-202ENST00000546360 1575 ntTSL 2 BASIC18.37■□□□□ 0.53
TRIM44Q96DX7 AMT-204ENST00000427987 1646 ntTSL 5 BASIC18.37■□□□□ 0.53
TRIM44Q96DX7 GOLGA2P3Y-201ENST00000416946 1653 ntBASIC18.37■□□□□ 0.53
TRIM44Q96DX7 SLC19A2-201ENST00000236137 3671 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
TRIM44Q96DX7 TRIM25-201ENST00000316881 5734 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
TRIM44Q96DX7 C2orf54-202ENST00000388934 1911 ntAPPRIS P4 TSL 2 BASIC18.37■□□□□ 0.53
TRIM44Q96DX7 SMC5-201ENST00000361138 5980 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
TRIM44Q96DX7 OS9-204ENST00000389146 2091 ntTSL 2 BASIC18.37■□□□□ 0.53
TRIM44Q96DX7 MSL2-201ENST00000309993 4692 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
TRIM44Q96DX7 PIGG-202ENST00000383028 2787 ntTSL 1 (best) BASIC18.36■□□□□ 0.53
TRIM44Q96DX7 JARID2-202ENST00000397311 5595 ntAPPRIS ALT2 TSL 2 BASIC18.36■□□□□ 0.53
TRIM44Q96DX7 OPCML-IT1-201ENST00000533859 2936 ntTSL 2 BASIC18.36■□□□□ 0.53
TRIM44Q96DX7 SAFB2-201ENST00000252542 3371 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
TRIM44Q96DX7 GUCD1-206ENST00000435822 3613 ntAPPRIS ALT1 TSL 1 (best) BASIC18.36■□□□□ 0.53
TRIM44Q96DX7 TNK2-202ENST00000381916 4223 ntTSL 2 BASIC18.36■□□□□ 0.53
TRIM44Q96DX7 MBD6-201ENST00000355673 4282 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
TRIM44Q96DX7 GMPPB-203ENST00000480687 6108 ntAPPRIS P1 TSL 2 BASIC18.36■□□□□ 0.53
TRIM44Q96DX7 DOCK4-206ENST00000437633 6212 ntAPPRIS P2 TSL 1 (best) BASIC18.36■□□□□ 0.53
TRIM44Q96DX7 GRSF1-201ENST00000254799 6666 ntAPPRIS P1 TSL 5 BASIC18.36■□□□□ 0.53
TRIM44Q96DX7 LGALSL-201ENST00000238875 3926 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
TRIM44Q96DX7 GALNT14-201ENST00000324589 2169 ntTSL 2 BASIC18.36■□□□□ 0.53
TRIM44Q96DX7 TRPC6-203ENST00000360497 2631 ntTSL 1 (best) BASIC18.36■□□□□ 0.53
TRIM44Q96DX7 SRP9-203ENST00000366839 1596 ntTSL 1 (best) BASIC18.36■□□□□ 0.53
TRIM44Q96DX7 ATP6AP2-201ENST00000378438 2022 ntAPPRIS ALT2 TSL 5 BASIC18.36■□□□□ 0.53
TRIM44Q96DX7 IGHV3-73-201ENST00000390636 437 ntAPPRIS P1 BASIC18.36■□□□□ 0.53
TRIM44Q96DX7 UBB-203ENST00000395839 1012 ntAPPRIS P1 TSL 2 BASIC18.36■□□□□ 0.53
TRIM44Q96DX7 HTR3E-202ENST00000415389 2139 ntAPPRIS ALT2 TSL 1 (best) BASIC18.36■□□□□ 0.53
TRIM44Q96DX7 PPP1R13L-202ENST00000418234 3118 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
TRIM44Q96DX7 MCM3AP-AS1-202ENST00000420074 1947 ntTSL 1 (best) BASIC18.36■□□□□ 0.53
TRIM44Q96DX7 AC093585.1-201ENST00000425183 428 ntTSL 2 BASIC18.36■□□□□ 0.53
TRIM44Q96DX7 VGLL4-210ENST00000426568 1428 ntTSL 1 (best) BASIC18.36■□□□□ 0.53
TRIM44Q96DX7 IL11RA-202ENST00000441545 1700 ntAPPRIS P1 TSL 5 BASIC18.36■□□□□ 0.53
TRIM44Q96DX7 MIR155HG-201ENST00000456917 1600 ntTSL 5 BASIC18.36■□□□□ 0.53
TRIM44Q96DX7 CNOT8-224ENST00000523698 862 ntTSL 2 BASIC18.36■□□□□ 0.53
TRIM44Q96DX7 YPEL3-203ENST00000562641 1941 ntTSL 3 BASIC18.36■□□□□ 0.53
TRIM44Q96DX7 AC092118.1-202ENST00000568697 718 ntTSL 3 BASIC18.36■□□□□ 0.53
TRIM44Q96DX7 AC009133.1-201ENST00000569981 2449 ntTSL 2 BASIC18.36■□□□□ 0.53
TRIM44Q96DX7 AP005242.2-201ENST00000580065 1175 ntBASIC18.36■□□□□ 0.53
TRIM44Q96DX7 CNN1-210ENST00000592923 1848 ntTSL 2 BASIC18.36■□□□□ 0.53
TRIM44Q96DX7 SDR42E2-201ENST00000602312 2630 ntAPPRIS P1 TSL 5 BASIC18.36■□□□□ 0.53
TRIM44Q96DX7 USP49-203ENST00000394253 9034 ntAPPRIS P1 TSL 5 BASIC18.36■□□□□ 0.53
TRIM44Q96DX7 RSBN1-201ENST00000261441 6621 ntAPPRIS P1 TSL 2 BASIC18.36■□□□□ 0.53
TRIM44Q96DX7 E2F7-202ENST00000416496 5297 ntTSL 5 BASIC18.36■□□□□ 0.53
TRIM44Q96DX7 ALDH3A2-226ENST00000631291 3822 ntTSL 5 BASIC18.36■□□□□ 0.53
TRIM44Q96DX7 MTRF1L-202ENST00000367231 3539 ntTSL 1 (best) BASIC18.36■□□□□ 0.53
TRIM44Q96DX7 BRWD1-201ENST00000333229 10141 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
TRIM44Q96DX7 GORASP2-201ENST00000234160 3173 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
TRIM44Q96DX7 SLC22A12-203ENST00000377572 2887 ntTSL 1 (best) BASIC18.36■□□□□ 0.53
TRIM44Q96DX7 ROBO4-201ENST00000306534 4710 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
TRIM44Q96DX7 ACER2-201ENST00000340967 2238 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
TRIM44Q96DX7 RUNDC3B-203ENST00000394654 2064 ntAPPRIS P4 TSL 2 BASIC18.35■□□□□ 0.53
TRIM44Q96DX7 TIMP2-201ENST00000262768 3652 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
TRIM44Q96DX7 PDE3B-202ENST00000455098 3665 ntAPPRIS ALT2 TSL 1 (best) BASIC18.35■□□□□ 0.53
TRIM44Q96DX7 STPG3-AS1-201ENST00000612170 1701 ntTSL 2 BASIC18.35■□□□□ 0.53
TRIM44Q96DX7 PXDN-201ENST00000252804 6808 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
TRIM44Q96DX7 MRPL4-203ENST00000393733 1620 ntTSL 5 BASIC18.35■□□□□ 0.53
TRIM44Q96DX7 ZFYVE28-211ENST00000515312 3247 ntAPPRIS ALT2 TSL 2 BASIC18.35■□□□□ 0.53
TRIM44Q96DX7 LPAR5-201ENST00000329858 3171 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
TRIM44Q96DX7 IGF2-207ENST00000434045 1583 ntTSL 1 (best) BASIC18.35■□□□□ 0.53
TRIM44Q96DX7 PNCK-202ENST00000370142 1525 ntTSL 5 BASIC18.35■□□□□ 0.53
TRIM44Q96DX7 PBX3-203ENST00000373487 2902 ntTSL 5 BASIC18.35■□□□□ 0.53
TRIM44Q96DX7 COLCA2-201ENST00000398035 1414 ntTSL 1 (best) BASIC18.35■□□□□ 0.53
TRIM44Q96DX7 NADK2-206ENST00000506945 1437 ntTSL 2 BASIC18.35■□□□□ 0.53
TRIM44Q96DX7 MLLT11-201ENST00000368921 4075 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
TRIM44Q96DX7 NDUFS6-201ENST00000274137 1082 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
TRIM44Q96DX7 SAPCD2P4-201ENST00000424595 1171 ntBASIC18.35■□□□□ 0.53
TRIM44Q96DX7 KRT18P48-201ENST00000434763 852 ntBASIC18.35■□□□□ 0.53
TRIM44Q96DX7 NDUFS6-202ENST00000469176 550 ntTSL 2 BASIC18.35■□□□□ 0.53
TRIM44Q96DX7 SPINK2-202ENST00000504762 659 ntAPPRIS ALT2 TSL 2 BASIC18.35■□□□□ 0.53
TRIM44Q96DX7 RPS23-206ENST00000510210 1058 ntTSL 2 BASIC18.35■□□□□ 0.53
Retrieved 100 of 98,524 protein–RNA pairs in 31.6 ms