Protein–RNA interactions for Protein: Q8NCS4

TMEM35B, Transmembrane protein 35B, humanhuman

Predictions only

Length 154 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM35BQ8NCS4 ACSL6-201ENST00000296869 2561 ntTSL 5 BASIC17.15■□□□□ 0.34
TMEM35BQ8NCS4 KLHL36-204ENST00000564996 2173 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
TMEM35BQ8NCS4 AC012485.3-201ENST00000637634 2424 ntTSL 5 BASIC17.15■□□□□ 0.34
TMEM35BQ8NCS4 SLC4A3-204ENST00000373760 4134 ntAPPRIS P1 TSL 5 BASIC17.15■□□□□ 0.34
TMEM35BQ8NCS4 SURF4-207ENST00000545297 2863 ntTSL 2 BASIC17.14■□□□□ 0.34
TMEM35BQ8NCS4 NCAPH2-205ENST00000420993 2037 ntAPPRIS P3 TSL 1 (best) BASIC17.14■□□□□ 0.34
TMEM35BQ8NCS4 ATG13-216ENST00000530500 2030 ntTSL 2 BASIC17.14■□□□□ 0.34
TMEM35BQ8NCS4 PTPN11-201ENST00000351677 6101 ntAPPRIS P3 TSL 1 (best) BASIC17.14■□□□□ 0.34
TMEM35BQ8NCS4 COPS7B-206ENST00000410017 2051 ntTSL 3 BASIC17.14■□□□□ 0.33
TMEM35BQ8NCS4 VARS2-212ENST00000542001 4064 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
TMEM35BQ8NCS4 TRIM27-202ENST00000377199 2967 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
TMEM35BQ8NCS4 BATF2-201ENST00000301887 2142 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
TMEM35BQ8NCS4 NPNT-201ENST00000305572 3003 ntTSL 1 (best) BASIC17.14■□□□□ 0.33
TMEM35BQ8NCS4 MPL-201ENST00000372470 1908 ntAPPRIS P2 TSL 1 (best) BASIC17.14■□□□□ 0.33
TMEM35BQ8NCS4 ACOXL-201ENST00000340561 2188 ntTSL 1 (best) BASIC17.14■□□□□ 0.33
TMEM35BQ8NCS4 PBX1-215ENST00000559240 2866 ntTSL 5 BASIC17.14■□□□□ 0.33
TMEM35BQ8NCS4 CORO2B-201ENST00000261861 3569 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
TMEM35BQ8NCS4 CORO2B-204ENST00000566799 3566 ntTSL 1 (best) BASIC17.14■□□□□ 0.33
TMEM35BQ8NCS4 EXT2-210ENST00000533608 3136 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
TMEM35BQ8NCS4 AC078942.1-201ENST00000448698 589 ntTSL 4 BASIC17.14■□□□□ 0.33
TMEM35BQ8NCS4 AL022341.1-201ENST00000455294 389 ntTSL 2 BASIC17.14■□□□□ 0.33
TMEM35BQ8NCS4 AP000344.2-201ENST00000512987 629 ntBASIC17.14■□□□□ 0.33
TMEM35BQ8NCS4 NDUFS7-216ENST00000546283 1060 ntTSL 2 BASIC17.14■□□□□ 0.33
TMEM35BQ8NCS4 AC020978.5-201ENST00000564147 533 ntTSL 4 BASIC17.14■□□□□ 0.33
TMEM35BQ8NCS4 LINC01413-201ENST00000564843 772 ntTSL 3 BASIC17.14■□□□□ 0.33
TMEM35BQ8NCS4 ATG9B-212ENST00000639579 4539 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
TMEM35BQ8NCS4 SLC29A1-205ENST00000371740 2219 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
TMEM35BQ8NCS4 FP565260.3-204ENST00000623795 2238 ntTSL 2 BASIC17.14■□□□□ 0.33
TMEM35BQ8NCS4 PLAA-205ENST00000520884 2041 ntTSL 2 BASIC17.14■□□□□ 0.33
TMEM35BQ8NCS4 HEY1-208ENST00000523976 1325 ntTSL 2 BASIC17.14■□□□□ 0.33
TMEM35BQ8NCS4 GBA2-203ENST00000378103 3611 ntAPPRIS P3 TSL 1 (best) BASIC17.14■□□□□ 0.33
TMEM35BQ8NCS4 NR4A3-204ENST00000618101 5706 ntAPPRIS P4 TSL 5 BASIC17.14■□□□□ 0.33
TMEM35BQ8NCS4 HS6ST2-201ENST00000370833 1938 ntTSL 5 BASIC17.13■□□□□ 0.33
TMEM35BQ8NCS4 RNLS-201ENST00000331772 1447 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
TMEM35BQ8NCS4 CHID1-215ENST00000528581 1431 ntTSL 2 BASIC17.13■□□□□ 0.33
TMEM35BQ8NCS4 KIFC1-211ENST00000428849 2706 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
TMEM35BQ8NCS4 CLN5-208ENST00000636183 6664 ntAPPRIS P2 TSL 1 (best) BASIC17.13■□□□□ 0.33
TMEM35BQ8NCS4 KIAA0895-207ENST00000436884 1952 ntTSL 2 BASIC17.13■□□□□ 0.33
TMEM35BQ8NCS4 TNKS1BP1-207ENST00000532437 5952 ntAPPRIS P2 TSL 1 (best) BASIC17.13■□□□□ 0.33
TMEM35BQ8NCS4 PCTP-201ENST00000268896 2044 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
TMEM35BQ8NCS4 FAM227B-201ENST00000299338 2008 ntAPPRIS P3 TSL 2 BASIC17.13■□□□□ 0.33
TMEM35BQ8NCS4 TRIM14-201ENST00000341469 4454 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
TMEM35BQ8NCS4 KRT35-201ENST00000246639 1778 ntTSL 1 (best) BASIC17.13■□□□□ 0.33
TMEM35BQ8NCS4 VASP-201ENST00000245932 2305 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
TMEM35BQ8NCS4 IKBIP-201ENST00000299157 3189 ntAPPRIS P4 TSL 1 (best) BASIC17.13■□□□□ 0.33
TMEM35BQ8NCS4 ITSN1-209ENST00000399352 5408 ntTSL 1 (best) BASIC17.13■□□□□ 0.33
TMEM35BQ8NCS4 TRIM24-202ENST00000415680 3799 ntAPPRIS ALT2 TSL 1 (best) BASIC17.13■□□□□ 0.33
TMEM35BQ8NCS4 YIF1B-201ENST00000329420 964 ntTSL 3 BASIC17.13■□□□□ 0.33
TMEM35BQ8NCS4 MRPS18A-202ENST00000372133 1062 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
TMEM35BQ8NCS4 PABPN1L-201ENST00000411789 873 ntTSL 1 (best) BASIC17.13■□□□□ 0.33
TMEM35BQ8NCS4 AC004461.1-201ENST00000412461 403 ntBASIC17.13■□□□□ 0.33
TMEM35BQ8NCS4 RPP21-221ENST00000428040 594 ntTSL 2 BASIC17.13■□□□□ 0.33
TMEM35BQ8NCS4 RPP21-224ENST00000442966 525 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
TMEM35BQ8NCS4 HYPK-202ENST00000442995 1051 ntAPPRIS P2 TSL 1 (best) BASIC17.13■□□□□ 0.33
TMEM35BQ8NCS4 KIAA0930-215ENST00000496226 589 ntTSL 5 BASIC17.13■□□□□ 0.33
TMEM35BQ8NCS4 MPP2-208ENST00000520305 2111 ntTSL 2 BASIC17.13■□□□□ 0.33
TMEM35BQ8NCS4 LOXL3-203ENST00000409249 2431 ntTSL 5 BASIC17.13■□□□□ 0.33
TMEM35BQ8NCS4 RPL3L-201ENST00000268661 2182 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
TMEM35BQ8NCS4 RSPO1-203ENST00000612451 2463 ntTSL 1 (best) BASIC17.13■□□□□ 0.33
TMEM35BQ8NCS4 TEAD3-204ENST00000639578 1308 ntAPPRIS P2 TSL 1 (best) BASIC17.13■□□□□ 0.33
TMEM35BQ8NCS4 RIC8B-213ENST00000638198 1611 ntTSL 5 BASIC17.13■□□□□ 0.33
TMEM35BQ8NCS4 PKP4-AS1-203ENST00000629904 1951 ntTSL 5 BASIC17.13■□□□□ 0.33
TMEM35BQ8NCS4 CCT7-216ENST00000540468 1674 ntTSL 2 BASIC17.13■□□□□ 0.33
TMEM35BQ8NCS4 AC005906.2-217ENST00000639573 1711 ntTSL 5 BASIC17.13■□□□□ 0.33
TMEM35BQ8NCS4 ZFAND5-204ENST00000376960 2686 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
TMEM35BQ8NCS4 TPCN1-201ENST00000335509 5274 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
TMEM35BQ8NCS4 PIPOX-201ENST00000323372 2414 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
TMEM35BQ8NCS4 FGF11-201ENST00000293829 3063 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
TMEM35BQ8NCS4 YTHDF2-209ENST00000542507 2825 ntAPPRIS P1 TSL 5 BASIC17.12■□□□□ 0.33
TMEM35BQ8NCS4 BMP2K-201ENST00000335016 3804 ntAPPRIS ALT2 TSL 5 BASIC17.12■□□□□ 0.33
TMEM35BQ8NCS4 MPP3-201ENST00000398389 2182 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
TMEM35BQ8NCS4 AADAT-208ENST00000515480 2193 ntAPPRIS P3 TSL 1 (best) BASIC17.12■□□□□ 0.33
TMEM35BQ8NCS4 GATB-209ENST00000512306 1519 ntTSL 1 (best) BASIC17.12■□□□□ 0.33
TMEM35BQ8NCS4 PITPNA-201ENST00000313486 3912 ntAPPRIS P2 TSL 5 BASIC17.12■□□□□ 0.33
TMEM35BQ8NCS4 AP1M1-202ENST00000429941 1578 ntTSL 2 BASIC17.12■□□□□ 0.33
TMEM35BQ8NCS4 AP3S2-216ENST00000617003 1561 ntBASIC17.12■□□□□ 0.33
TMEM35BQ8NCS4 FOXO3-201ENST00000343882 7308 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
TMEM35BQ8NCS4 RASGRP2-201ENST00000354024 2310 ntAPPRIS P2 TSL 1 (best) BASIC17.12■□□□□ 0.33
TMEM35BQ8NCS4 FRS2-206ENST00000549921 1952 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
TMEM35BQ8NCS4 MSI2-204ENST00000442934 1624 ntTSL 2 BASIC17.12■□□□□ 0.33
TMEM35BQ8NCS4 AC211486.1-202ENST00000416371 468 ntBASIC17.12■□□□□ 0.33
TMEM35BQ8NCS4 AL137003.1-201ENST00000423260 491 ntTSL 5 BASIC17.12■□□□□ 0.33
TMEM35BQ8NCS4 IRF3-204ENST00000442265 315 ntTSL 1 (best) BASIC17.12■□□□□ 0.33
TMEM35BQ8NCS4 LINC00899-202ENST00000444890 493 ntTSL 3 BASIC17.12■□□□□ 0.33
TMEM35BQ8NCS4 AL355140.1-201ENST00000457328 398 ntTSL 5 BASIC17.12■□□□□ 0.33
TMEM35BQ8NCS4 AHSA2-208ENST00000489653 1197 ntAPPRIS P1 TSL 5 BASIC17.12■□□□□ 0.33
TMEM35BQ8NCS4 AC211476.1-201ENST00000503899 468 ntBASIC17.12■□□□□ 0.33
TMEM35BQ8NCS4 MRFAP1-203ENST00000507420 563 ntAPPRIS P1 TSL 4 BASIC17.12■□□□□ 0.33
TMEM35BQ8NCS4 MTUS1-215ENST00000519066 567 ntTSL 4 BASIC17.12■□□□□ 0.33
TMEM35BQ8NCS4 DHDH-204ENST00000523250 634 ntTSL 5 BASIC17.12■□□□□ 0.33
TMEM35BQ8NCS4 AKIP1-211ENST00000534506 576 ntTSL 3 BASIC17.12■□□□□ 0.33
TMEM35BQ8NCS4 AC092718.3-202ENST00000564536 1032 ntAPPRIS P5 TSL 5 BASIC17.12■□□□□ 0.33
TMEM35BQ8NCS4 NDUFAB1-205ENST00000570319 885 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
TMEM35BQ8NCS4 TVP23B-206ENST00000574226 1080 ntAPPRIS ALT1 TSL 1 (best) BASIC17.12■□□□□ 0.33
TMEM35BQ8NCS4 LINC01128-208ENST00000608189 824 ntTSL 5 BASIC17.12■□□□□ 0.33
TMEM35BQ8NCS4 PCBP4-202ENST00000355852 2015 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
TMEM35BQ8NCS4 MINDY1-201ENST00000312210 2400 ntTSL 2 BASIC17.12■□□□□ 0.33
TMEM35BQ8NCS4 TTLL3-213ENST00000430793 2097 ntTSL 2 BASIC17.12■□□□□ 0.33
TMEM35BQ8NCS4 POR-218ENST00000461988 2522 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
TMEM35BQ8NCS4 Z98749.3-201ENST00000400206 1770 ntAPPRIS P1 TSL 2 BASIC17.12■□□□□ 0.33
Retrieved 100 of 98,524 protein–RNA pairs in 27.4 ms