Protein–RNA interactions for Protein: P51788

CLCN2, Chloride channel protein 2, humanhuman

Predictions only

Length 898 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLCN2P51788 MPP1-205ENST00000413259 2195 ntTSL 2 BASIC15.73■□□□□ 0.11
CLCN2P51788 QRICH2-205ENST00000636395 5677 ntAPPRIS ALT2 TSL 1 (best) BASIC15.73■□□□□ 0.11
CLCN2P51788 LINC00391-201ENST00000433569 1844 ntTSL 5 BASIC15.73■□□□□ 0.11
CLCN2P51788 SARDH-202ENST00000371867 1326 ntTSL 1 (best) BASIC15.73■□□□□ 0.11
CLCN2P51788 TRAPPC3-210ENST00000617904 1305 ntTSL 2 BASIC15.73■□□□□ 0.11
CLCN2P51788 MYEF2-201ENST00000267836 2958 ntAPPRIS ALT2 TSL 1 (best) BASIC15.73■□□□□ 0.11
CLCN2P51788 PKN1-202ENST00000342216 2960 ntTSL 2 BASIC15.73■□□□□ 0.11
CLCN2P51788 TNFRSF14-AS1-202ENST00000432521 3608 ntTSL 2 BASIC15.73■□□□□ 0.11
CLCN2P51788 SH2D6-202ENST00000389938 1975 ntAPPRIS P1 TSL 1 (best) BASIC15.73■□□□□ 0.11
CLCN2P51788 SH2D3C-206ENST00000429553 2794 ntTSL 1 (best) BASIC15.73■□□□□ 0.11
CLCN2P51788 ZFP28-201ENST00000301318 4096 ntAPPRIS P1 TSL 1 (best) BASIC15.73■□□□□ 0.11
CLCN2P51788 AC006460.2-201ENST00000638173 4744 ntTSL 5 BASIC15.73■□□□□ 0.11
CLCN2P51788 SOWAHA-201ENST00000378693 3211 ntAPPRIS P1 BASIC15.73■□□□□ 0.11
CLCN2P51788 SPAG9-205ENST00000505279 4659 ntTSL 1 (best) BASIC15.73■□□□□ 0.11
CLCN2P51788 SNX11-202ENST00000393405 2733 ntAPPRIS P1 TSL 2 BASIC15.73■□□□□ 0.11
CLCN2P51788 CDR2L-201ENST00000337231 3536 ntAPPRIS P1 TSL 1 (best) BASIC15.73■□□□□ 0.11
CLCN2P51788 TMEM147-201ENST00000222284 899 ntAPPRIS P1 TSL 1 (best) BASIC15.73■□□□□ 0.11
CLCN2P51788 SMN1-201ENST00000351205 900 ntAPPRIS P3 TSL 1 (best) BASIC15.73■□□□□ 0.11
CLCN2P51788 ANP32E-201ENST00000369114 1048 ntTSL 3 BASIC15.73■□□□□ 0.11
CLCN2P51788 HMGN4-201ENST00000377575 1225 ntAPPRIS P1 TSL 1 (best) BASIC15.73■□□□□ 0.11
CLCN2P51788 SMN2-201ENST00000380741 900 ntAPPRIS P4 TSL 1 (best) BASIC15.73■□□□□ 0.11
CLCN2P51788 ADARB2-201ENST00000381305 703 ntTSL 2 BASIC15.73■□□□□ 0.11
CLCN2P51788 RFXANK-202ENST00000392324 1059 ntTSL 1 (best) BASIC15.73■□□□□ 0.11
CLCN2P51788 UPF3AP3-201ENST00000420996 769 ntBASIC15.73■□□□□ 0.11
CLCN2P51788 AC074386.1-202ENST00000463561 864 ntBASIC15.73■□□□□ 0.11
CLCN2P51788 MRPL20-203ENST00000482352 1049 ntTSL 2 BASIC15.73■□□□□ 0.11
CLCN2P51788 HOXC-AS3-202ENST00000513165 533 ntTSL 3 BASIC15.73■□□□□ 0.11
CLCN2P51788 LINC02123-201ENST00000514869 885 ntTSL 1 (best) BASIC15.73■□□□□ 0.11
CLCN2P51788 CYB561D1-208ENST00000528785 1271 ntAPPRIS ALT1 TSL 5 BASIC15.73■□□□□ 0.11
CLCN2P51788 SLC25A3P1-206ENST00000569142 925 ntTSL 1 (best) BASIC15.73■□□□□ 0.11
CLCN2P51788 PGPEP1-209ENST00000604499 769 ntTSL 5 BASIC15.73■□□□□ 0.11
CLCN2P51788 GPALPP1-207ENST00000611650 899 ntBASIC15.73■□□□□ 0.11
CLCN2P51788 SMN2-216ENST00000638794 846 ntAPPRIS ALT2 TSL 5 BASIC15.73■□□□□ 0.11
CLCN2P51788 AL645728.2-201ENST00000641974 660 ntBASIC15.73■□□□□ 0.11
CLCN2P51788 DHX36-201ENST00000308361 3487 ntTSL 1 (best) BASIC15.73■□□□□ 0.11
CLCN2P51788 LINC01136-203ENST00000457348 2539 ntTSL 2 BASIC15.73■□□□□ 0.11
CLCN2P51788 ALDH3A1-212ENST00000494157 1572 ntTSL 3 BASIC15.73■□□□□ 0.11
CLCN2P51788 ZNF212-201ENST00000335870 2810 ntAPPRIS P1 TSL 1 (best) BASIC15.73■□□□□ 0.11
CLCN2P51788 FAM208B-201ENST00000328090 8626 ntAPPRIS P1 TSL 1 (best) BASIC15.73■□□□□ 0.11
CLCN2P51788 RUSC1-209ENST00000471876 1749 ntTSL 1 (best) BASIC15.73■□□□□ 0.11
CLCN2P51788 SEMA3B-212ENST00000616701 2958 ntAPPRIS P3 TSL 1 (best) BASIC15.73■□□□□ 0.11
CLCN2P51788 SCP2-201ENST00000371509 1889 ntTSL 1 (best) BASIC15.73■□□□□ 0.11
CLCN2P51788 ARHGEF40-201ENST00000298694 5919 ntAPPRIS P1 TSL 2 BASIC15.73■□□□□ 0.11
CLCN2P51788 MBD4-203ENST00000429544 2478 ntAPPRIS ALT2 TSL 1 (best) BASIC15.73■□□□□ 0.11
CLCN2P51788 PML-215ENST00000565898 5393 ntAPPRIS ALT2 TSL 1 (best) BASIC15.73■□□□□ 0.11
CLCN2P51788 TOP3BP1-201ENST00000420768 1380 ntBASIC15.73■□□□□ 0.11
CLCN2P51788 FBXO4-201ENST00000281623 1682 ntAPPRIS P1 TSL 1 (best) BASIC15.73■□□□□ 0.11
CLCN2P51788 IQCF3-205ENST00000456080 1685 ntAPPRIS P1 TSL 2 BASIC15.73■□□□□ 0.11
CLCN2P51788 DDHD1-202ENST00000357758 5603 ntAPPRIS P3 TSL 1 (best) BASIC15.73■□□□□ 0.11
CLCN2P51788 RTN4RL1-201ENST00000331238 3625 ntAPPRIS P1 TSL 1 (best) BASIC15.73■□□□□ 0.11
CLCN2P51788 POM121-203ENST00000434423 3750 ntAPPRIS ALT2 TSL 5 BASIC15.73■□□□□ 0.11
CLCN2P51788 CICP4-201ENST00000447359 2812 ntBASIC15.72■□□□□ 0.11
CLCN2P51788 GINS2-201ENST00000253462 2673 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
CLCN2P51788 PDHX-203ENST00000448838 2653 ntTSL 5 BASIC15.72■□□□□ 0.11
CLCN2P51788 NEO1-206ENST00000558964 4441 ntAPPRIS ALT2 TSL 1 (best) BASIC15.72■□□□□ 0.11
CLCN2P51788 FOXS1-201ENST00000375978 1319 ntAPPRIS P1 BASIC15.72■□□□□ 0.11
CLCN2P51788 REM2-202ENST00000536884 1331 ntTSL 2 BASIC15.72■□□□□ 0.11
CLCN2P51788 PTCH1-201ENST00000331920 8057 ntAPPRIS P1 TSL 5 BASIC15.72■□□□□ 0.11
CLCN2P51788 CDC42BPG-201ENST00000342711 5742 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
CLCN2P51788 MARK3-205ENST00000429436 3371 ntAPPRIS ALT1 TSL 1 (best) BASIC15.72■□□□□ 0.11
CLCN2P51788 SYBU-208ENST00000440310 3072 ntAPPRIS ALT2 TSL 5 BASIC15.72■□□□□ 0.11
CLCN2P51788 CNOT6-207ENST00000618123 6250 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
CLCN2P51788 LINC01250-201ENST00000457478 2344 ntTSL 2 BASIC15.72■□□□□ 0.11
CLCN2P51788 FKBP8-201ENST00000222308 1710 ntAPPRIS ALT1 TSL 1 (best) BASIC15.72■□□□□ 0.11
CLCN2P51788 TSNARE1-205ENST00000520166 1742 ntAPPRIS ALT2 TSL 1 (best) BASIC15.72■□□□□ 0.11
CLCN2P51788 LDLR-204ENST00000545707 2429 ntTSL 2 BASIC15.72■□□□□ 0.11
CLCN2P51788 RIMS3-201ENST00000372683 1408 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
CLCN2P51788 ATP23-201ENST00000300145 1245 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
CLCN2P51788 C22orf39-201ENST00000333059 1221 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
CLCN2P51788 CASK-202ENST00000378158 3848 ntTSL 5 BASIC15.72■□□□□ 0.11
CLCN2P51788 GPX1P2-201ENST00000429271 606 ntBASIC15.72■□□□□ 0.11
CLCN2P51788 AL049569.1-201ENST00000446261 636 ntTSL 3 BASIC15.72■□□□□ 0.11
CLCN2P51788 RNASET2-206ENST00000476238 887 ntAPPRIS P1 TSL 5 BASIC15.72■□□□□ 0.11
CLCN2P51788 KCNMA1-219ENST00000480683 2963 ntTSL 1 (best) BASIC15.72■□□□□ 0.11
CLCN2P51788 FBXL21-206ENST00000495672 589 ntTSL 4 BASIC15.72■□□□□ 0.11
CLCN2P51788 KRT73-AS1-202ENST00000551089 563 ntTSL 4 BASIC15.72■□□□□ 0.11
CLCN2P51788 AC010776.2-201ENST00000588946 1081 ntTSL 2 BASIC15.72■□□□□ 0.11
CLCN2P51788 STX10-207ENST00000589083 1241 ntTSL 1 (best) BASIC15.72■□□□□ 0.11
CLCN2P51788 AC006538.3-201ENST00000612495 578 ntBASIC15.72■□□□□ 0.11
CLCN2P51788 ZNF445-205ENST00000617032 1291 ntTSL 5 BASIC15.72■□□□□ 0.11
CLCN2P51788 MED16-214ENST00000617672 554 ntTSL 5 BASIC15.72■□□□□ 0.11
CLCN2P51788 PGLYRP1-201ENST00000008938 720 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
CLCN2P51788 LTBP2-205ENST00000556690 5614 ntAPPRIS ALT2 TSL 5 BASIC15.72■□□□□ 0.11
CLCN2P51788 BCRP2-201ENST00000398241 1842 ntTSL 2 BASIC15.72■□□□□ 0.11
CLCN2P51788 COG3-201ENST00000349995 4498 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
CLCN2P51788 ASIC1-202ENST00000447966 3778 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
CLCN2P51788 PTHLH-202ENST00000395868 1674 ntAPPRIS P3 TSL 1 (best) BASIC15.72■□□□□ 0.11
CLCN2P51788 RSRP1-201ENST00000243189 1502 ntAPPRIS P2 TSL 1 (best) BASIC15.72■□□□□ 0.11
CLCN2P51788 TUSC3-204ENST00000506802 1546 ntTSL 5 BASIC15.72■□□□□ 0.11
CLCN2P51788 COQ6-220ENST00000629426 1538 ntTSL 5 BASIC15.72■□□□□ 0.11
CLCN2P51788 LILRA6-201ENST00000245621 1395 ntAPPRIS ALT2 TSL 5 BASIC15.72■□□□□ 0.11
CLCN2P51788 MAGI1-216ENST00000497477 3555 ntTSL 5 BASIC15.72■□□□□ 0.11
CLCN2P51788 PDCD5-203ENST00000419343 1799 ntTSL 2 BASIC15.72■□□□□ 0.11
CLCN2P51788 CDH1-202ENST00000422392 2567 ntTSL 1 (best) BASIC15.72■□□□□ 0.11
CLCN2P51788 PPHLN1-204ENST00000358314 1643 ntTSL 2 BASIC15.72■□□□□ 0.11
CLCN2P51788 GLMP-201ENST00000362007 1604 ntAPPRIS P3 TSL 1 (best) BASIC15.72■□□□□ 0.11
CLCN2P51788 CACNA1H-206ENST00000565831 7815 ntAPPRIS ALT2 TSL 1 (best) BASIC15.72■□□□□ 0.11
CLCN2P51788 HNRNPU-204ENST00000440865 3207 ntTSL 2 BASIC15.72■□□□□ 0.11
CLCN2P51788 AL353732.1-201ENST00000569618 1459 ntBASIC15.71■□□□□ 0.11
CLCN2P51788 GGACT-202ENST00000455100 2678 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.11
Retrieved 100 of 98,524 protein–RNA pairs in 50.4 ms