Protein–RNA interactions for Protein: P31273

HOXC8, Homeobox protein Hox-C8, humanhuman

Predictions only

Length 242 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HOXC8P31273 PRPF38B-202ENST00000370022 1591 ntTSL 1 (best) BASIC17.4■□□□□ 0.38
HOXC8P31273 NFIC-202ENST00000395111 1755 ntTSL 2 BASIC17.4■□□□□ 0.38
HOXC8P31273 CERNA1-202ENST00000560518 1972 ntTSL 2 BASIC17.4■□□□□ 0.38
HOXC8P31273 IFFO1-211ENST00000615885 2775 ntTSL 5 BASIC17.4■□□□□ 0.38
HOXC8P31273 NES-201ENST00000368223 5558 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
HOXC8P31273 TRPC6-202ENST00000348423 2448 ntTSL 1 (best) BASIC17.4■□□□□ 0.38
HOXC8P31273 EPB41-205ENST00000373797 2402 ntTSL 1 (best) BASIC17.4■□□□□ 0.38
HOXC8P31273 ZCCHC24-202ENST00000372336 4933 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
HOXC8P31273 TMEM130-202ENST00000345589 2261 ntTSL 1 (best) BASIC17.4■□□□□ 0.38
HOXC8P31273 SOX14-201ENST00000306087 2055 ntAPPRIS P1 BASIC17.4■□□□□ 0.38
HOXC8P31273 TP73-204ENST00000378280 2062 ntTSL 1 (best) BASIC17.4■□□□□ 0.38
HOXC8P31273 LMNA-203ENST00000368297 1679 ntTSL 2 BASIC17.4■□□□□ 0.38
HOXC8P31273 CPA1-201ENST00000011292 1487 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
HOXC8P31273 CTHRC1-201ENST00000330295 1271 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
HOXC8P31273 PRKN-201ENST00000338468 1276 ntTSL 1 (best) BASIC17.4■□□□□ 0.38
HOXC8P31273 PRKN-203ENST00000366894 1157 ntTSL 5 BASIC17.4■□□□□ 0.38
HOXC8P31273 SS18L1-202ENST00000370848 1238 ntTSL 1 (best) BASIC17.4■□□□□ 0.38
HOXC8P31273 PHACTR1-202ENST00000379329 707 ntTSL 2 BASIC17.4■□□□□ 0.38
HOXC8P31273 NDUFC1-203ENST00000394228 761 ntAPPRIS P1 TSL 2 BASIC17.4■□□□□ 0.38
HOXC8P31273 AL929472.3-201ENST00000433474 700 ntTSL 5 BASIC17.4■□□□□ 0.38
HOXC8P31273 RPL7P3-201ENST00000441388 714 ntBASIC17.4■□□□□ 0.38
HOXC8P31273 AC012441.1-201ENST00000446669 685 ntBASIC17.4■□□□□ 0.38
HOXC8P31273 AC078785.1-203ENST00000467342 573 ntTSL 4 BASIC17.4■□□□□ 0.38
HOXC8P31273 AC012531.3-201ENST00000513209 777 ntAPPRIS P1 TSL 3 BASIC17.4■□□□□ 0.38
HOXC8P31273 RMDN1-212ENST00000519966 1164 ntTSL 2 BASIC17.4■□□□□ 0.38
HOXC8P31273 PLEKHA7-214ENST00000532079 565 ntTSL 5 BASIC17.4■□□□□ 0.38
HOXC8P31273 AL163974.1-201ENST00000554540 466 ntTSL 5 BASIC17.4■□□□□ 0.38
HOXC8P31273 LINC02109-201ENST00000565798 869 ntTSL 5 BASIC17.4■□□□□ 0.38
HOXC8P31273 AC009486.1-201ENST00000569860 813 ntBASIC17.4■□□□□ 0.38
HOXC8P31273 GPX4-206ENST00000588919 803 ntTSL 2 BASIC17.4■□□□□ 0.38
HOXC8P31273 ANKS3-227ENST00000592711 580 ntTSL 4 BASIC17.4■□□□□ 0.38
HOXC8P31273 AC243829.4-204ENST00000616926 1115 ntTSL 5 BASIC17.4■□□□□ 0.38
HOXC8P31273 AL391650.2-201ENST00000640097 941 ntTSL 5 BASIC17.4■□□□□ 0.38
HOXC8P31273 PSEN2-203ENST00000422240 1947 ntAPPRIS ALT1 TSL 2 BASIC17.4■□□□□ 0.38
HOXC8P31273 AC011477.6-201ENST00000604980 1927 ntBASIC17.4■□□□□ 0.38
HOXC8P31273 VGLL2-202ENST00000352536 1709 ntTSL 1 (best) BASIC17.4■□□□□ 0.38
HOXC8P31273 CYP2R1-207ENST00000532378 1746 ntTSL 5 BASIC17.4■□□□□ 0.38
HOXC8P31273 MPP1-205ENST00000413259 2195 ntTSL 2 BASIC17.4■□□□□ 0.38
HOXC8P31273 CTSD-213ENST00000637915 1982 ntAPPRIS ALT2 TSL 5 BASIC17.4■□□□□ 0.38
HOXC8P31273 KDM1A-202ENST00000400181 3059 ntAPPRIS ALT2 TSL 1 (best) BASIC17.4■□□□□ 0.38
HOXC8P31273 AC011676.5-201ENST00000624864 2660 ntBASIC17.4■□□□□ 0.38
HOXC8P31273 TLE3-201ENST00000317509 5207 ntTSL 1 (best) BASIC17.4■□□□□ 0.38
HOXC8P31273 EIF2B4-205ENST00000445933 1608 ntAPPRIS ALT1 TSL 1 (best) BASIC17.39■□□□□ 0.38
HOXC8P31273 ABHD10-201ENST00000273359 2590 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.38
HOXC8P31273 PCBP4-205ENST00000461554 2147 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.38
HOXC8P31273 ADIRF-AS1-201ENST00000418273 2627 ntTSL 3 BASIC17.39■□□□□ 0.37
HOXC8P31273 FAM215B-201ENST00000458392 2183 ntTSL 1 (best) BASIC17.39■□□□□ 0.37
HOXC8P31273 MSTO2P-201ENST00000314835 1709 ntBASIC17.39■□□□□ 0.37
HOXC8P31273 SHANK3-203ENST00000445220 5175 ntAPPRIS ALT2 TSL 5 BASIC17.39■□□□□ 0.37
HOXC8P31273 RBPMS2-202ENST00000560606 1746 ntTSL 2 BASIC17.39■□□□□ 0.37
HOXC8P31273 ARNTL-205ENST00000403510 2745 ntTSL 2 BASIC17.39■□□□□ 0.37
HOXC8P31273 DMPK-204ENST00000447742 2754 ntAPPRIS ALT2 TSL 1 (best) BASIC17.39■□□□□ 0.37
HOXC8P31273 MYLK3-202ENST00000536476 1795 ntAPPRIS ALT2 TSL 2 BASIC17.39■□□□□ 0.37
HOXC8P31273 USE1-206ENST00000595101 1776 ntTSL 2 BASIC17.39■□□□□ 0.37
HOXC8P31273 SLC22A6-204ENST00000458333 1521 ntTSL 1 (best) BASIC17.39■□□□□ 0.37
HOXC8P31273 FLT3LG-201ENST00000204637 1046 ntTSL 1 (best) BASIC17.39■□□□□ 0.37
HOXC8P31273 NAT8-201ENST00000272425 947 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
HOXC8P31273 NINJ2-201ENST00000305108 1252 ntAPPRIS P3 TSL 1 (best) BASIC17.39■□□□□ 0.37
HOXC8P31273 RPF1-202ENST00000370656 724 ntTSL 2 BASIC17.39■□□□□ 0.37
HOXC8P31273 TEX30-203ENST00000376022 828 ntTSL 2 BASIC17.39■□□□□ 0.37
HOXC8P31273 MS4A13-201ENST00000378185 808 ntTSL 1 (best) BASIC17.39■□□□□ 0.37
HOXC8P31273 BRF1-202ENST00000379932 884 ntTSL 5 BASIC17.39■□□□□ 0.37
HOXC8P31273 GZMB-202ENST00000382540 816 ntTSL 5 BASIC17.39■□□□□ 0.37
HOXC8P31273 LINC00116-202ENST00000426713 461 ntAPPRIS ALT2 TSL 3 BASIC17.39■□□□□ 0.37
HOXC8P31273 BCRP2-202ENST00000447763 634 ntBASIC17.39■□□□□ 0.37
HOXC8P31273 AP000552.1-208ENST00000452952 576 ntTSL 4 BASIC17.39■□□□□ 0.37
HOXC8P31273 AC097717.1-202ENST00000457577 740 ntTSL 3 BASIC17.39■□□□□ 0.37
HOXC8P31273 AC082651.1-201ENST00000478468 832 ntTSL 1 (best) BASIC17.39■□□□□ 0.37
HOXC8P31273 BCRP6-201ENST00000510112 632 ntBASIC17.39■□□□□ 0.37
HOXC8P31273 BCRP7-201ENST00000511549 544 ntBASIC17.39■□□□□ 0.37
HOXC8P31273 NME2-206ENST00000513177 692 ntAPPRIS P1 TSL 2 BASIC17.39■□□□□ 0.37
HOXC8P31273 AC109479.1-201ENST00000519603 624 ntTSL 2 BASIC17.39■□□□□ 0.37
HOXC8P31273 OSGIN2-203ENST00000520659 801 ntTSL 2 BASIC17.39■□□□□ 0.37
HOXC8P31273 AP001063.1-201ENST00000568332 529 ntBASIC17.39■□□□□ 0.37
HOXC8P31273 TECR-207ENST00000596073 1170 ntTSL 1 (best) BASIC17.39■□□□□ 0.37
HOXC8P31273 TECR-220ENST00000600083 1204 ntTSL 2 BASIC17.39■□□□□ 0.37
HOXC8P31273 TPTE2P2-205ENST00000606711 505 ntTSL 5 BASIC17.39■□□□□ 0.37
HOXC8P31273 LINC01515-215ENST00000608678 854 ntTSL 5 BASIC17.39■□□□□ 0.37
HOXC8P31273 LINC02351-201ENST00000614728 289 ntTSL 2 BASIC17.39■□□□□ 0.37
HOXC8P31273 AC015819.2-201ENST00000618730 555 ntTSL 3 BASIC17.39■□□□□ 0.37
HOXC8P31273 RIC8A-217ENST00000626818 159 ntTSL 5 BASIC17.39■□□□□ 0.37
HOXC8P31273 SDCBP-202ENST00000413219 2086 ntAPPRIS P3 TSL 2 BASIC17.39■□□□□ 0.37
HOXC8P31273 C16orf89-203ENST00000474471 1829 ntAPPRIS ALT2 TSL 5 BASIC17.39■□□□□ 0.37
HOXC8P31273 ATP6V1C2-201ENST00000272238 1565 ntTSL 5 BASIC17.39■□□□□ 0.37
HOXC8P31273 SLCO5A1-206ENST00000530307 2630 ntTSL 1 (best) BASIC17.39■□□□□ 0.37
HOXC8P31273 SIGLEC6-205ENST00000425629 1852 ntAPPRIS P4 TSL 2 BASIC17.39■□□□□ 0.37
HOXC8P31273 AC068831.3-201ENST00000553321 1858 ntTSL 2 BASIC17.39■□□□□ 0.37
HOXC8P31273 CBX2-202ENST00000310942 4644 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
HOXC8P31273 ZNF514-201ENST00000295208 3011 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
HOXC8P31273 FBLN7-203ENST00000409450 1394 ntTSL 1 (best) BASIC17.39■□□□□ 0.37
HOXC8P31273 SLC25A3-217ENST00000552981 1351 ntAPPRIS ALT1 TSL 1 (best) BASIC17.39■□□□□ 0.37
HOXC8P31273 SSC5D-202ENST00000587166 3017 ntAPPRIS ALT2 TSL 1 (best) BASIC17.39■□□□□ 0.37
HOXC8P31273 PFKP-202ENST00000381075 2769 ntTSL 2 BASIC17.39■□□□□ 0.37
HOXC8P31273 MATN3-201ENST00000407540 2524 ntAPPRIS P2 TSL 1 (best) BASIC17.39■□□□□ 0.37
HOXC8P31273 DRD5P1-201ENST00000456605 1438 ntBASIC17.38■□□□□ 0.37
HOXC8P31273 LBX1-AS1-201ENST00000430651 2553 ntTSL 2 BASIC17.38■□□□□ 0.37
HOXC8P31273 APOBEC3A-202ENST00000402255 1478 ntAPPRIS P1 TSL 5 BASIC17.38■□□□□ 0.37
HOXC8P31273 SERPINF2-203ENST00000450523 1462 ntTSL 2 BASIC17.38■□□□□ 0.37
HOXC8P31273 LINC01205-202ENST00000497996 1493 ntTSL 2 BASIC17.38■□□□□ 0.37
HOXC8P31273 LPAR5-202ENST00000431922 2695 ntAPPRIS P1 TSL 2 BASIC17.38■□□□□ 0.37
Retrieved 100 of 98,524 protein–RNA pairs in 26.7 ms